Branchiostoma belcheri (Belcher's lancelet): 109467424
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Entry
109467424 CDS
T07532
Name
(RefSeq) cleavage stimulation factor subunit 3-like
KO
K14408
cleavage stimulation factor subunit 3
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109467424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbel03019
]
109467424
Messenger RNA biogenesis [BR:
bbel03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109467424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Cullin_binding
Motif
Other DBs
NCBI-GeneID:
109467424
NCBI-ProteinID:
XP_019620946
UniProt:
A0A6P4YUM7
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MMSGAGDGGLGKEQGYIPDRVKKAEKRIEANAFDVDAWSVLIREAQNQNIDKARGTYERL
VGQFQTAGRYWKIYIEAEMKARNYERVEKLFQRCLMKVLNIDLWKCYLNYVRETKGSLPS
YREKMAQAYDFALDKMGMDIMSYQIWSDYISFLKGVEAVGSYAENQRITAVRRVYQRGCV
NPMVNIEQLWREYNQYETGINPIIAKKMIEDRSRDYMNARRVAKEYEAVTRGLNRNMPSI
PPTGTPDEVKQVDLWKKYINWEKSNPLRTEDHAVIAKRVIFAYEQCMLCLGHRPDIWYEA
AKYLEESSKLLSEKGDLNAGKMFSDEAAAMYERAISTLLKKNMMLYFSYADFEENRMKHQ
KVHSIYNKLLGIDDIDPTLGYIQYMKFARRAEGIKSARSIFKRAREDSRSKYHVYVSAAL
MEYFCSKDKSIACKIFELGLKKYSDSADYILQYLDFLSHLNEDNNTRVLFERVLTSGALP
VDKQGEIWAKFLEFECSIGDLSSVLKVEKRRRDIFKEEFEDRETCLLVDRYKYLDLFPLS
TSELKAVGFKLRPTAADMVTGAEMPAAVLPEIDEFKKPEYPKPATDQMLPFKPRALAPPG
MHPVPGGVFPMPIPAVSLLNLMPPPTCFHGPFVNIDDLVKTFETCALPEDPSQLLDKMCN
GEETSNPKLFPIPLQNSDSAKKGQKRPADNEAKEESDDEDNVAPPAHDIYRSRQQKRVR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggagcgggcgatggcgggctgggaaaggagcagggctacatccctgaccgt
gtcaagaaagcagagaagagaatcgaagcgaacgcgtttgatgtagatgcatggagtgta
ttgatacgagaggcccagaaccagaatatcgacaaagcgcggggaacgtacgagcgactg
gtgggacagtttcagactgcagggcgctactggaagatatacattgaggctgagatgaaa
gccaggaactatgaaagagttgaaaagttattccagcgatgtctgatgaaggtgttgaac
attgacctgtggaagtgttacctgaactatgtcagagagaccaagggcagtctgccatct
tacagagaaaagatggcacaggcatatgactttgctctagacaagatggggatggacatc
atgtcataccagatctggagtgactacatttctttcttgaaaggagtggaggcggtaggt
tcgtacgcagagaaccagcgaatcacagcggtgcgtagagtttaccagcgaggctgtgtc
aaccccatggtcaacatagaacagctgtggagggagtacaaccagtatgagactggcatc
aaccccatcatagccaagaagatgatagaagatcgcagtagggactacatgaacgccaga
cgggtcgctaaggagtatgaagctgtaaccagaggtctgaaccggaacatgccgtccatt
ccacctactggtacaccagacgaagtcaaacaggttgacctttggaaaaagtacatcaat
tgggagaagagcaatccactgagaacagaggaccacgctgtcatcgcaaagagagtaata
tttgcgtacgagcagtgcatgttgtgcctgggccaccgacctgacatctggtatgaggct
gcaaagtacctggaggagtccagcaagctcctgtctgagaagggggacttgaatgcaggt
aagatgttcagtgatgaggcagcggccatgtatgagagagccatctccacgctactcaag
aagaacatgatgctgtacttctcctacgctgactttgaagagaatcgaatgaagcatcag
aaagtccattccatctacaacaagcttctgggcatagatgacatcgacccaacactgggt
tatatccagtacatgaagtttgccaggagagcagaaggcatcaagtctgcccggagcatc
tttaagagagccagagaagacagccggtccaagtatcatgtctatgtgtccgctgcactc
atggagtacttctgtagtaaggataagagcatagcctgtaagatttttgagctgggtctg
aagaagtacagtgacagtgcagactacatcctgcagtacctggacttcctgtcacatctt
aatgaggacaacaatactcgtgtgctgtttgaaagggtgctgacttcaggggctcttcct
gtggacaaacaaggtgagatctgggccaagttcctggagtttgaatgcagtatcggtgac
ctttcctctgtcctgaaggtcgagaaaagacggagagacatcttcaaagaggagtttgag
gatcgtgaaacgtgtcttctggtggacagatacaagtatctcgacctgtttcccctgtct
acttcagaactcaaggctgtgggcttcaaactacgacctactgccgctgacatggtgaca
ggtgctgagatgcctgcagccgtcctaccagagattgacgagtttaagaaacctgagtac
ccaaaacctgccactgatcagatgctgccctttaagcccagagctctggctcctcctggg
atgcaccctgttcctggtggtgtgttccccatgccaatcccagcagtctctctgctcaac
ctcatgccccctccaacctgcttccatggtccctttgttaacattgatgacttggtgaag
acttttgagacctgtgcattgccagaagatccctctcaactgttagacaagatgtgcaat
ggagaagagacctccaacccaaagttgttcccgatcccgctgcaaaattctgactccgcg
aagaagggccagaaacgtcccgcggacaacgaagccaaggaagagtccgatgacgaagac
aacgttgcgccgcccgctcacgatatctaccgcagccgacagcagaaacgcgtcagatag
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