Branchiostoma belcheri (Belcher's lancelet): 109467930
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Entry
109467930 CDS
T07532
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109467930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbel03041
]
109467930
Spliceosome [BR:
bbel03041
]
Complex A
U1 snRNP components
U1 related factors
109467930
Complex B
109467930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Glyco_hyd_101C
DUF4936
Motif
Other DBs
NCBI-GeneID:
109467930
NCBI-ProteinID:
XP_019621646
UniProt:
A0A6P4YWL5
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MNKPPGGPQPGQPPPFPGGGPPPMMMPPFAVRPTSIMIGSYDVALLSRLKMPPGMAPPPG
FLPPPGMGQPPPRTIPPPGMSQPPPGMSVPPPGMTMPPFGHPPPMPGMPMMPPPGMTMPP
MGMPGTQAQAPGTTAAPAVTAMASGAPGVTTQADPAGTKVTGFVSGSDQPMQSATAVNPQ
LASVQQEGVAASPGTASPAQTSEKPKEEKSPWTEHKAPDGRTYFYNSKTKQSTWEKPAEL
KSHAELLLDSCPWKEFKADSGKVYYYNSQTKESRWTIPKELEELRAMIAAQGLDKLKTAG
GDSADSSPAATTPGQAQQQGTPGQMGTPGQVLTPGQGVATPGQVMAAGQQDMTTQPASVV
VVVPAVDTAAVATQQAAEGTPSEADTDDKSQPGEDTTDSAPEKKEYVYANKAEATAAFKA
LLKEKGVASNATWEQAMKTIVNDPRYGALKKLNEKKQAFNAYKTQRAKEEKEEERQRAKE
AKEKLQEFLEGHERMTSTTKYRKAESMFCDLQVWQAVPERDRKDLYEDVLFFLAKKEKED
AKVLRKRNIAALKNILDNMANITYKTTWSEAQQHLLDNPTFAEDDELQNMDKEDALICFE
EHIRALEKEEEEEKERQRGRERRQQRKNREGFLVLLDELHEAGQLHSMSTWMELYSIISA
DVRFTNMLGQPGSTPLDLFKFYVEDLKARFHDEKKIIKDILKDKDFTVEVNSSFEDFATA
ISSDKRAATLDTGNIKLSYNSLIEKAEAREKERQKEEARKQRRKEAAFKNMLKQATPPLD
PTSTWDDVRDRFVNDAAFDQILVESERARLFKEFIQALETECSHHHSKSSSKKHSKKAKK
HRSKRSRSHSASESEEEERSHRRSSKKKKRSRSRSRSESTDRSDSEESRSRSRKHKKKSK
KRRHRSHSSDSEQETRKAERKSRDKSESRASPPPSDSKKEKTGWDTSGESDLSEGELESR
RRALLQQLADDQ
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagccgcccggcggaccgcagcccggccagcccccgccattccccgggggcgga
ccgccgcccatgatgatgccgcccttcgctgtaaggccaactagcatcatgattggttct
tatgatgtggctttactatccagactcaaaatgcccccaggaatggcaccacctccaggt
ttcctcccccctccgggcatgggccagccgccccctcgcacgatcccccctcctggtatg
tcccagccccctccggggatgagtgtccctcctcctggcatgaccatgccccccttcggc
cacccccctcccatgcctggtatgcccatgatgccccctccagggatgaccatgcctccc
atgggaatgccggggacacaggcacaagcaccagggactacagctgcaccggctgtcact
gcgatggcgtccggggctccaggtgtgaccacgcaggcagatccagccggtaccaaggtg
acggggtttgtttccggatcagaccagcccatgcaaagtgcgacagctgtcaatccacag
ctggcctccgtacagcaggagggcgtggccgcctcacctgggacggcctcacctgcacag
acgtcagaaaagcccaaagaggagaagagcccgtggacagagcacaaagcgccggacggg
aggacgtacttctacaactccaaaaccaaacagtcgacgtgggagaaacctgccgagctg
aagagccacgcggagctgctgctggactcgtgtccatggaaggagttcaaggcagacagt
ggcaaggtttactactacaactctcaaaccaaagagtcgcgctggaccatcccgaaggag
ctggaggaactgcgagccatgatcgctgcccagggtctggacaagctgaagacggcgggc
ggggactcagccgacagcagccctgctgcgaccaccccgggacaggcgcagcagcaggga
acacctgggcagatgggaacacctggacaggtgctgacacctgggcagggcgtggctaca
cctgggcaagtcatggcagctgggcagcaggacatgacgacccagcctgcatctgtggtg
gtggtggtgcctgcagtagacacagctgcagtcgctacacaacaggctgcagagggaact
ccatcagaagctgacacagacgacaagtctcagcctggcgaggacacgactgacagcgct
cctgagaagaaggagtacgtctacgctaacaaggccgaggccaccgcagcgtttaaagca
ctgctcaaggaaaagggagttgcgtccaacgccacgtgggaacaggccatgaagacaatc
gtcaacgacccccgttacggagccctcaagaagctgaatgagaagaagcaggcctttaat
gcctacaagacgcagagagccaaggaggagaaggaggaagaacgacagagggccaaggag
gcgaaggagaagctgcaggaatttcttgaaggtcatgagaggatgacctcaactaccaag
tacaggaaagcagagagcatgttctgtgacctacaggtctggcaagcggttcctgagaga
gatcggaaggacctgtacgaggacgtcctcttcttcctggcgaagaaggagaaggaagac
gccaaggtgctgcgcaagcggaacatcgcggcgctgaagaacatcctggacaacatggcc
aacatcacgtacaagacgacgtggtcggaggcccagcagcacctgctggataaccccacc
ttcgctgaggacgacgagctgcagaacatggacaaggaggacgctctcatctgctttgag
gagcacatcagagcgctggagaaggaggaggaggaggagaaggagcgtcagcgggggcgg
gagagacgtcagcagaggaagaaccgtgagggtttcctggtcctgctggacgagctgcat
gaggcgggacagctgcactccatgtccacctggatggagctgtactccatcatcagcgcc
gacgtcaggttcaccaacatgttaggccagccagggtcgacacctctggaccttttcaag
ttctatgtggaagacctcaaggctcgctttcatgacgagaagaaaattatcaaggacatt
ctcaaggataaagactttactgtggaggtcaactcaagtttcgaagactttgcgactgcg
attagttctgacaaacgtgcagctacactggacacaggaaacataaaactgtcctacaac
agcctgattgagaaggcagaggccagagaaaaggaaagacagaaggaggaagccaggaaa
caacgaaggaaggaagcagcgtttaagaacatgcttaaacaggccacgccacctctggat
cctacctcaacctgggacgatgttagggacaggtttgtaaatgatgcagcctttgaccaa
atcctggtggaatcagagagagccagactcttcaaggagttcatccaggccttggagacg
gagtgcagccaccaccactccaaatcctcctccaagaaacattccaagaaggccaagaaa
caccgcagcaagaggtcaaggtcacactctgcatcagagtcggaggaagaggagaggtca
cacagaaggtcatcaaagaagaagaagcggtcacggtcaagatcaagatcagaatccaca
gatagatcagactcggaggagagccgcagcagatccaggaagcacaagaagaagtcgaag
aagcggcggcaccgttcccactcgtccgactcggagcaggagaccaggaaggcggagagg
aagtccagagacaagtcggagtcccgagcgagcccgcccccgtccgattccaagaaggag
aagacaggatgggatacgtcaggtgaaagcgacctcagtgaaggggagcttgagagccgc
agacgagccctactccaacagctagcagatgaccagtag
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