Branchiostoma belcheri (Belcher's lancelet): 109468566
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Entry
109468566 CDS
T07532
Name
(RefSeq) collagen alpha-5(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel04382
Cornified envelope formation
bbel04512
ECM-receptor interaction
bbel04518
Integrin signaling
bbel04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109468566
04518 Integrin signaling
109468566
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109468566
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109468566
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbel04147
]
109468566
00536 Glycosaminoglycan binding proteins [BR:
bbel00536
]
109468566
Exosome [BR:
bbel04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109468566
Glycosaminoglycan binding proteins [BR:
bbel00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109468566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109468566
NCBI-ProteinID:
XP_019622386
UniProt:
A0A6P4YYL0
LinkDB
All DBs
Position
Unknown
AA seq
1223 aa
AA seq
DB search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NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggggacgttatgggatgtgacgaggataaacctcgccatcttcctactattagttgta
catgcaaatgctcagttttctagaaagaaaagttcgtcctgcgactgccctgagggacct
gagggaccagctggacctcctgggccacccggtttacctggcatggatggaatgatggga
atgaacggagaaagaggaccacctggaccaaggggagggccgggcagcaaaggcccgcca
ggtccagccggaaatacaggagaaccgggaatgccgggtttcccaggaaaacaaggcccc
aaaggcatccctggcaacagaggttcagctggtccccccgggcctgctgggccaccggga
gaagcaggagaaccaggtgatgagggcaagccaggtatgatgggaatggcgggcccacct
ggacctcagggattgatcggaccccctggtaagacaggtcagcctggaggccctggaagc
agggggatgccgggtccaccaggtaacaatggcggaccaggcatgccgggactgaaaggt
cataggggattccctggagcaccaggaccactcggtccccccggaatggtcggaagagac
ggtaaagagggcaaggaaggcgacgctggaccgcctggacccgcgggtccttccggccga
ccgggagacaaaggatcccctggaaaatctggaagcccgggtcgccccggaagtatcgga
ccccctggacctcctggcaattcgggtgatcggggagcccccggacctcccggcttccaa
ggagcaccgggtatggccggaaaagcaggcatccaaggcaaaaccggaaatgacggttcc
cctggcgctattggtccacctggacctccaggacaacgtggtgttgggcagcctggaccg
cctggacctcctggggaagggaaaactggaaaggatggtgctaagggaccagcaggattg
ccgggcagacccggaatgccgggaagaccgggaccaccaggtcaagctggtcagtccaag
gaaggcccagaaggtccacctggtccccctggcccggccggtttgggaagaagaggacct
cctggtcccccaggacccccaggagctatgagccaggcagcacggcaacccggtccgccc
ggcctgcccggcgaaaggggcagacctggcccgcctggtgagcagggatcgcccggccca
gtaggacttcccggtcaaggcatcaaggggcaccaaggtatgccagggatgcccggccaa
cagggacagccaggaccgccaggacctcctggaatcggagaagctggacctccaggaaaa
caaggaaagcaaggtgacccgggcgttggtatgcctggggagccaggacaaagaggttca
ccaggtccttcaggcagtgctggacgccccggccagcctggtcccccaggacctcccggc
atcggacagccaggaaatgacggacaggccggtcagcctggaccacctggacctccagga
ttccctggccctgctggtgaaggaaagagaggctcccctggaagaacaggccaacctgga
ccacctggacaacaaggaccagcaggaaaaccaggaattggaaagccaggccgcacagga
gagccagggcctcgaggagacaagggtgatgatggcatgggtacccctggcccacgtggt
ccccctggtcttcccggtctcccagcaccagctgtagatctatcagctttggcaggtgca
ctcgccaagcagatgccaagtccgaagggagtaagaggaccacccggtccaccaggttct
cccggctccccaggatcaggcggacgtggtgaccccggccctccaggaaaaccaggacct
cctggacccccgtcaaccccaggcacaggtgggggcccacctggtccacccggtccatca
ggccccgctggcccacccggcccctccggacctggcatgcctggcccacccggcccactt
ggcccccctggcccgtctggacttcccggacctcccggaccacccggtcaaggccttaag
ggtgaccctggcccccctggacccgccggaggacctgatggtccaggtggtcgcggagac
cctggacccccgggggcgcccggacaagatggaccacccggccctggaggacccccagga
cctggtggacccgatggaccacctggaccaccaggaattggccggccggggccacaaggc
ccacctggacccggaggaccaccaggaccgccaggactcggagtgaagggtgacccaggc
cccatcggcggcccaggaccacagggaccacctggttcaccaggtgaaccgggcattgga
gcgaagggagacattggccagccgggagagccaggggaacctggacaaaggggccccaga
ggacctccaggaatcggacagttgggaccacccggaccccctggacccggcggacctgca
ggaccccccggtgtaggtgtgaagggtgaggccggaccaccaggattccccggaaccgcc
ggacctcccggacccagcggtccacctggaattggcacacagggaccacccggtcctctc
ggcccacctggtcccactggaccgccaggagcaccagcgcccgaaatcccgggaccacct
ggccctgcaggtccccttggtcccgtgggcccacctggtcctccaggacttcccggagtt
ggattgaagggagaaccaggcgcaggcggacctcagggacccccaggacctcccggtgtt
ggactgaagggagagccaggtgtactaggaccccctgggcccgcaggacctactggtcca
cccggacagggtatacctggtgacgcaggaccccccggtctgcccggcctgcctggcgcc
aggggcttgcctggactcgctggaaggacaggtccccagggacgcccgggtggattcaat
cttctcacaagacatagccagttagacgtggttccggactgccctgaaaacatgacgaaa
ttgtgggagggctacagtttacttcatgtcgaaggaaacgagagagcgcacgatcaagat
ttaggaaaaccggattcctgtatgccgagattcgccatcctgcccttctttagctgtgag
cctgacgatgtctgcaagtacggctacagggacgacaagacgtactggctatctaccttt
gacacagcggctggacagcccccacaacctatctcaggcactgctatcagacccttcatt
agtaggtgtgccgtgtgtctcacaaccagcctggtaatcgctgtacatagccaaagagac
gcccagatcccagaatgtcccgtcggttggagaagcatttgggtcggatacagcttcctt
atgcacaccgctgccggagagggaggtggtcagccgttgacgagccccggaagttgcctg
gacttcttccgttctgcacctttcatcgagtgcgtgggagacatctgtgacgtttcagcc
aacgaactgagtttctggttgatcggtatccccggtggggaagacgatcagttcaatcaa
ccggaaagggccgtgggaggtttagatcttttaagaagtcgaattagtcgctgcagagtt
tgtgtctacagtggaggcctgtacgaatccatattagcaggagcacgtacgggaggagga
aggtttttctag
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integrated database retrieval system
