Branchiostoma belcheri (Belcher's lancelet): 109470318
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Entry
109470318 CDS
T07532
Name
(RefSeq) LOW QUALITY PROTEIN: TFIIH basal transcription factor complex helicase XPD subunit-like
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03022
Basal transcription factors
bbel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109470318
09124 Replication and repair
03420 Nucleotide excision repair
109470318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbel03021
]
109470318
03036 Chromosome and associated proteins [BR:
bbel03036
]
109470318
03400 DNA repair and recombination proteins [BR:
bbel03400
]
109470318
Enzymes [BR:
bbel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
109470318
Transcription machinery [BR:
bbel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109470318
Chromosome and associated proteins [BR:
bbel03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109470318
DNA repair and recombination proteins [BR:
bbel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109470318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
nSTAND3
SNF2-rel_dom
AAA_11
DrsE_2
PspAA
Histone_HNS
Motif
Other DBs
NCBI-GeneID:
109470318
NCBI-ProteinID:
XP_019624787
UniProt:
A0A6P4Z156
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MKINIDGLLVLFPYDYIYPEQYSYMVELKRSLDAKGHCVLEMPSGTGKTVSLLSLIVAYL
KTSPKDVCKLIYCSRTVPEIEKVLEELRKLMEYYEKETGEPPNLIGLALSSRKNLCIHPE
ASTLQFGKEVDGRCHQMTASFVRARHERDPDVPVCDFYERFDALGRETLLPPGIYNLDDM
KDVGREKGYCPYFMARYAITYANIVVYSYHYLLDPKIADLVSKELAKNSVVVFDEAHNID
NVCIDSMSVTINRRMLDRCQANVETLTRTVQRLKDTDQQRLRQEYSRLVEGLREANVARE
TDVVLSNPVLPDEVLQEAVPGNIRTAEHFVGFLKRFMEYLKSRLRIQHVVQETPASFLKD
LKEKVCLDRKPLRFCSERLNSLIRTLEIADLTDFSPLILLANFXTLVSTYXEGFILIMEP
FDDRTPTISNPILNFSCMDASIAIKPVFDRFQSVVITSGTLSPLDMYPKILDFRPVNMAS
FTMTLARPCICPMIVGRGNDQVTMTSKFESREDVAIIRNYGNLLLTMSAVVPDGIVAFFT
SYSYMESTVAAWYEQGIIENVQRNKLLFIETQSAAETSVALQKYQEACENGRGAILLSVA
RGKVSEGIDFEHHLGRAVVMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRVLRGKTDYGVMVFADKRFARSDKRGKLPKWIQEYLSDGMCNLTTDEAVQVSKKF
LRQMAQPFRREDQLGLSLLTLEQLQTEEMKKRAQQTAHQAFMT
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaacatagatggcctgctggtgctcttcccgtatgactacatctaccctgaa
cagtactcctacatggtggagctcaaacggtcactggatgccaagggccactgtgttctg
gagatgccttcggggacaggaaagactgtctccctactctcacttattgtggcatacctg
aagacatctccaaaggatgtgtgcaaactcatctactgctccagaactgtgccagagatt
gaaaaggttcttgaggagctgaggaagctgatggagtattatgagaaggagacaggggaa
ccccccaacctgattggtttagccctgagttccaggaaaaatctgtgcatccatccagag
gccagtacactacagtttgggaaggaggttgatggtcggtgtcaccagatgacagcgtcc
ttcgtcagggccagacatgaaagggacccagacgtgcctgtctgtgacttctatgagaga
tttgatgcccttgggagagaaaccctactaccacctgggatctacaatttagatgacatg
aaggatgtgggacgagagaagggctactgtccttacttcatggccagatatgcaataacc
tatgccaacattgttgtgtacagctaccactacttactggaccccaagattgctgactta
gtgtccaaggagctggctaagaactctgtggtggtgtttgatgaggctcacaatatagac
aatgtgtgtatagactccatgagtgtgaccatcaacagaaggatgctggatcgctgtcag
gctaatgtagaaactctcaccaggactgtgcagagactaaaggacacggatcagcagagg
ttgcgtcaggagtactcccggctggtggagggactgagggaggctaacgtagccagggaa
acagacgtggtgctctccaacccagtgttaccagatgaggtattacaggaggcagtccca
ggaaacatcaggactgcagagcactttgtgggcttcctgaagaggttcatggagtatctg
aagtcacgtctgaggatccagcatgttgtacaggagactcctgcctcctttcttaaggac
ctgaaggagaaggtgtgcctggacaggaaacctctcaggttctgttcagagaggctgaac
tccctgatccgtaccctggagatcgcagacttgacagatttctcccctctcatcctgctg
gccaacttcngcaccctggtcagcacctacnatgaaggcttcattctcatcatggagccg
tttgacgaccgtacacccaccatctctaaccctatactcaacttcagctgtatggatgcc
tccattgccatcaagccagtgtttgaccggttccagtctgtggtcatcacgtcagggacc
ctgtctccactggacatgtatcccaagatcctggacttcagaccagttaacatggcttcc
ttcactatgacactggctcgaccctgtatctgccctatgattgtgggccgtggaaatgac
caggtgacgatgacttccaagtttgagtcaagggaagatgttgcaatcatcaggaattat
gggaacttgctgttgacgatgtcagctgtggttccagatggtattgtggccttcttcacc
agctacagctacatggagtctactgtagcggcctggtacgaacagggtatcattgaaaat
gtccagagaaataaactcctgttcatcgagacccagagtgcagcagagaccagcgtggct
ctgcagaagtaccaggaggcctgtgagaatggcagaggagccatcctgctgtctgtggcc
aggggaaaagtctccgaaggaattgattttgaacaccatctgggccgtgcagtggtcatg
tttgggattccctacgtctacacacagagcaggattcttaaggccaggttggagtacttg
cgagatcagttccagatcagggaaaatgacttcctaacatttgatgccatgagacatgca
gcacagtgtgttggaagagttctgagagggaagacagactatggtgtcatggtgtttgca
gacaagaggtttgctcgttctgacaagcgaggaaaactgcccaagtggatccaggagtac
ctgtctgatggcatgtgtaacctgacgacagacgaggctgttcaggtgtccaaaaagttc
ctcaggcagatggcacagcccttcaggagggaggaccagctgggcctgtccctgctgacg
ttagagcagctccagactgaggagatgaagaaacgggctcagcagacagcacatcaagct
ttcatgacatga
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integrated database retrieval system
