Branchiostoma belcheri (Belcher's lancelet): 109471823
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Entry
109471823 CDS
T07532
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbel03041
]
109471823
Enzymes [BR:
bbel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109471823
Spliceosome [BR:
bbel03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109471823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
Helicase_C
R3H
OB_NTP_bind
DEAD
Ank_2
Ank_5
HA2_N
Ank
ATPase
AAA_19
Ank_4
nSTAND3
AAA_22
Ank_3
FtsK_SpoIIIE
PhoH
AAA_23
ABC_tran
AAA_7
Motif
Other DBs
NCBI-GeneID:
109471823
NCBI-ProteinID:
XP_019626738
UniProt:
A0A6P4YQR5
LinkDB
All DBs
Position
Unknown
AA seq
1383 aa
AA seq
DB search
MATRGSGRPPPRPRSRNSPPVGQQGMGERMHQGGGNRSGMSRPGSASPQPAGGEGGKRGG
RPPPLHKREICIDEEVKIAVRIAVEKFRYNESQKEYEFPSSLTSVERAFIHRYCQSLGIK
TKSRGKGSNRYLTIFKKDSRTMGLGTATFTLCRSARHHTHTLLQRFPITGRERQELMPRT
ERGIGEGHSREGNRASGLNGRLNNGIQQVPPSRGQSEFDNFRRTLPVAVLQEVIVKTVNE
NQVVLIAGETGSGKTTQVPQFILDDAQCTNRPCRIICTQPRRISALTVAERVASERGEKI
GQTVGYQIRLESRVSPRTLLTFCTNGVLLRTLMGGDSALTTITHVIVDEIHERDRFSDFL
LIKLREMLGYFKGLKVVLMSATLNTELFQQYFGSCPLINVSGNLFDVTEFFLEDVLRSTN
YSNQKMQKYKKERGQLEQQQSSLDQWYQQGGTPAPGVVSPKEQLTQHLAEKDLDTAQQED
YEVSDLQDIPQERDVSEMEPWLIQEMDKCIMTAWLNNDADAYVQLFHLIMSENVSVDYRH
SETCSTTLMIAAGRGNVAAVEQLLALGANINLRAPNGLTALDWARKFGQTDTVEVLEAYI
ASSEITVSDDSLLVSESSQLSAEDRELLKAYHQSFDDEHVDLDLILCLLFNICSSQEEGA
ILVFLPGYEEIVTLRDAIMWDDKRFCDTSRYQVYTLHSAMQSGDQKRVFQQPPAGVRKII
LSTNIAETSVTINDVVFVIDSGKVKEKSFDALTSVSMLKSVWVSKASAQQRKGRAGRCRP
GVCFHLFSRVRYDSLQEYQDPELLRTPLQELCLQTKLLSAPNTPIAEFLAKAPEPPAFLV
LRNAVQLLKTVDALDMWEDLTELGHHMVDLPIEPRLAKMVLYSVVLKCLDPVLTIACALA
YRDPFILPNQPSQKRAAVYCRKKFSAGAYSDHMALLRAFQGWQKAKSDGWERSFCEKNFL
CQATMEMIFGMRTQLLGQLRASGFVRARGGGDIRDLNTNSENWAVIKAALCAGSYPNMVR
VDRENLWLTTQMEKSVRFHNTSVLGQAANPKVTVALSHAQSVTKLPTDWLVYEEISRAHR
YAYVRCCTLMSPVTVAIFAGPSRLPLDALTDPNAPDNRPGGDDQFENYSDSGGEEGENNK
RATTKLDDWISFKLDSEAAHLLLQLRYKWHSLFLRRMRAPAKPWSQVDEGVIRAVIGVLS
SEEQALGLQQPSGIGQRPRPMFNWDFSSSATESYGSQRGSRKNSTEYQAPEPSFLALWKS
NESVPVVEENKGDRFYPRTSPANREKRILKRDYRSPREFDNRSDRSSVKSASANSSQASS
RTSSCTTSPCPSPNHTKGGERTPPSSASPAGWGEKYAPTAGQDTPLREPQGWEDTTTVSK
CQK
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccgggggtcaggccgaccgcctccgagaccaagatcgcgaaattctcctcct
gttggtcagcaggggatgggagagaggatgcaccaaggaggaggaaacagatcaggcatg
tctcgtcccgggagtgcctccccacagcctgctggtggagagggtgggaagagaggagga
cggcccccgcctctacacaagagagaaatctgcatagatgaggaggtgaagattgcagtc
aggatagctgtggagaagttcaggtacaacgagagtcagaaagagtatgagtttccatcg
agtttgacctctgtggagagagccttcatccacaggtactgtcagagtctaggaatcaag
acaaagagcagaggaaagggcagcaaccgctatttgacaatcttcaaaaaggacagcagg
acaatggggttgggtacagccaccttcaccctgtgtcgcagtgccaggcaccacactcac
accctcctgcagaggtttcctatcacgggcagggagagacaggagctcatgcctaggact
gagaggggtattggagaagggcacagtagagaagggaacagagcttcaggtttgaatggt
cgcctgaacaatggtatccagcaggtgcccccttctcggggacagtcagagtttgacaat
tttcgccggacgttgcctgtggctgtcctgcaggaagtcattgtcaagactgtcaatgag
aaccaggtggtgctgattgccggggaaactgggtcgggaaagaccactcaggtcccccag
tttatcttagatgatgcccagtgtaccaaccgaccatgtcggatcatctgcacccagcca
cgcagaatctctgccctgacagtcgcagagagggtggcgagtgagaggggagagaagatt
ggccagactgtgggctaccagatcagactggaaagcagggtttctccaagaaccttgctg
acattttgcaccaatggtgttcttctgagaactctgatgggaggggacagtgcactgacc
accatcacacatgtcattgtggatgagatccatgagcgagacagatttagtgacttcctg
ttgatcaagctgcgtgagatgttgggttacttcaagggcctgaaggttgtcctcatgagt
gcaaccctcaacactgaactgttccagcagtactttggaagttgtccactcatcaatgtt
tcaggaaacctgtttgatgtgacagaattcttcttggaagatgttttaagaagtaccaac
tactccaaccagaagatgcagaagtacaagaaagagagggggcaattggagcaacagcag
tcctcacttgaccagtggtaccaacagggtggcacccccgccccgggagtggtcagtccc
aaagaacagctgactcagcacctggctgagaaggacctggacacagcacagcaggaggac
tatgaggtcagcgacctacaggacatcccccaggagagagatgtgagcgagatggaaccc
tggctcatacaggagatggataagtgcatcatgactgcctggctaaataatgatgctgat
gcgtatgtccagctattccatctcatcatgagtgaaaatgtcagtgttgactatcggcac
agtgagacgtgctccactactctgatgattgcagcaggtcgaggcaacgtggcagcagtg
gaacagctgttagcactgggagccaacatcaacctccgagcacccaatggactgactgct
cttgactgggcaagaaagtttggtcagacagatactgtagaggtgctagaagcttatata
gcatccagtgagatcactgtgagtgatgactctctgctggtgagtgagagcagccagctg
agtgcagaagacagggaactgctgaaggcgtaccaccagagctttgatgatgaacacgtg
gacctggatctcatcctgtgcctgctcttcaacatctgtagcagtcaggaggaaggggcc
atcctggtgttcttacctggctatgaggagatagtgaccctgcgagatgccattatgtgg
gacgacaagagattctgtgataccagcaggtaccaggtgtatactctacactctgctatg
cagtcaggggaccagaaaagggttttccagcaacccccagccggagtcagaaaaattatc
ctgtcgaccaatattgctgaaacaagtgtcaccatcaatgatgtggtatttgtgattgac
tcaggaaaagtcaaagagaaatcctttgatgctctgacatctgtgtccatgttgaaaagt
gtatgggtgtctaaagctagtgcccagcagaggaagggcagggcaggcaggtgtcgccca
ggtgtgtgtttccacttgttcagcagggtgaggtatgacagccttcaggagtaccaggac
cctgagctgctcaggacgccactacaggaactatgcctgcagacaaagctcctgtctgca
cccaacacccccatagcagagttcctggccaaggcccccgagccacctgctttcctggtg
ctgagaaatgctgtgcagttgctaaagactgtagatgcccttgacatgtgggaggaccta
acagagctgggacaccacatggtggacctccccatagagcctagactggccaagatggtg
ctgtactctgttgtcctgaagtgtctggaccctgtcctcaccatcgcctgtgctctggca
tacagggacccctttatcctgcccaaccagccatcccagaagcgtgcagctgtgtactgc
aggaagaagttctctgctggtgcttacagtgatcacatggccctcctgagagcatttcag
ggctggcagaaggccaagagtgatggctgggagcgcagtttctgtgagaagaactttctc
tgccaggccaccatggaaatgatctttggcatgaggactcagctgttgggtcagctgcgg
gcctctgggtttgtacgcgctcgaggaggaggggacatcagggacctgaacacaaactcc
gagaactgggcagtcatcaaggctgccctgtgtgctgggagctatccaaatatggttaga
gtggacagggaaaacctctggctgacaacacagatggagaaaagtgttcgtttccacaac
acttctgttctcggacaagcggcaaacccaaaggtcacagtagcgctgtctcacgcccag
agtgtcaccaagctgcccactgattggctggtgtatgaggaaatctcaagggcacaccgt
tatgcctatgtgcgatgctgcacactgatgagccccgtcacagtcgccatatttgcaggc
ccctcacggctcccactggatgctctgacggaccccaacgcacctgacaacagaccaggg
ggtgatgaccagtttgagaactacagtgacagtggaggggaggagggggagaacaacaag
cgtgccactaccaagttggatgactggatttctttcaagctggattcagaggcggcccac
ctgctgctgcagctgcggtacaaatggcattctctcttcctgcgccgcatgagagcacct
gccaaaccatggtcacaggtggatgagggtgttatcagagctgtgattggtgtgctgtcc
agcgaggagcaggccctgggcctccaacagccttctgggataggacagagaccacgccca
atgtttaactgggatttttcctcttcagccacagagtcctatggttcccagaggggcagt
aggaagaactcaactgagtaccaagcacctgaaccctcattcctagccttgtggaagtcg
aacgagtcagtgccagtggtagaggagaacaagggtgacaggttctacccacgaaccagc
ccagccaatagggagaagcgaatcctgaagagagattacaggtctccccgagagtttgat
aaccgttcagatcgctcgtcagtgaagtctgcctctgccaatagtagccaggcctccagt
cgtaccagtagctgcaccaccagcccctgcccctcacccaaccacaccaagggtggggag
agaaccccaccctcctctgcctctccagcaggatggggggagaaatacgcccccacagcg
ggtcaggacaccccccttcgtgagccccaagggtgggaggacaccacaacagtctccaaa
tgtcagaagtga
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