Branchiostoma belcheri (Belcher's lancelet): 109471854
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Entry
109471854 CDS
T07532
Name
(RefSeq) spatacsin-like isoform X1
KO
K19026
spatacsin
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbel03400
]
109471854
DNA repair and recombination proteins [BR:
bbel03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
109471854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
109471854
NCBI-ProteinID:
XP_019626807
UniProt:
A0A6P4Z6X9
LinkDB
All DBs
Position
Unknown
AA seq
2646 aa
AA seq
DB search
MEALEETLQFVLQKRQTSVDIQHVREAKICTKIGTTALLNEDSTISLLKLGGCEQTRSCL
RDIRCFKWEERGASSSVGPYSTADSSIAVVTTNGTLQLHSVGCGQSTELTTTCLGSCCVQ
DVIGPGAVDIVEVGADVVTVLVAGRLLCKLAVSEEVLTVISQIKLQDEAVDVKQTKVVSG
ILFCLQEDGVVDIFFVASGRKLGTVVINKYLSVRNEPLASEEHQNLSCFDISNNLTSLVV
GNSSNIHNVNLNEYFTLFPHHLCSVIEDQNQPVRRFEGINEDDLGSFQFLSREVADRSWK
SHLWQVKRKVMERSFFQRSGRKTGVSHPAPSYFAAEKEARYWFEDVPEISASFKKRGKDL
GMHLSYMRKPLTTSGFAASRKVGRPTAREVCQGSEALSNASLPLPVEVQGLELMLLTVAD
TTAVAWFSPKQDKDGNHGFVCQYNLSTGTCKNHRLKEPSVVVQSDDHLHPHLLLTDITLS
AVAWAAPQEELVNQLMLYAGASVAESLCHINHWDPCSIPIHTLEVGLRHRQLDTVAFFLK
SRENVFRPKSRTPAQSPLSPTPPSPPPAPSLDTLQLRAAIDLLVSAIHENIKEPPSKQFA
EQLLHLTLDHLHLLIRTATELAADTSHHPFDPSVDLPGPVASPGFTVDRPQLEQCVQTLM
GYVVELRHFLKRPAVSSQTGGVESFVQKALSGEGAYTLQLLDEDDKCLKRWEAMDKEAMI
CDAILTSNIPLAQSCLQERAFGQSSGHVQAGKLTSVTDLGLNMALQCLVDKDLQQAWKLL
ANMGYEVTQQLHRICFYTPNRALRDFLVEELLKSGSLSAGEQAMVQFVQQVESLYTCQSF
QSAKAFLQETATKRDPLQAVSQDLTAQASDFLSLHLQCEEIGGAGPMNCENSSYAHLVLE
WVRHWDQQTRERVLLERMLAMDTKEEHVSKNVSCESTWAYLTSHHMWNSLLQWIQTSFPV
EEDKEKVVTFTLQGPLTLQVINQLGSCTPFLKDRILDELARRGQFVSDELLKFEDLLRRL
ARTHQAISHPHVMEGEPLKSLSVLDYHHLFITYCVEKQLPNLLYYYLDFYGLNEEDGKLC
IPADCAPWVDMLVQFRHTASRYTDPSAVFQASLSNACVFLGADSVTVQTMLEEGRVLMAL
ATLMYAPENITQALTEPATDSDKQWKICPSVLKRTLAAHPKLQSVLFPTHPLGTVPPQDI
TLYQLLQRNCPFDPSRLFGWQEMNTLSSGSDCLQDMPHFSHQELVSQYAHTEDLQFTYYL
RRGRPSFAFAKFLSAEMEARGSLSQRRLLRASLKAYCLALRNFTQPAVTASCVLFLEMLG
VDSTKLRVDVQTANTVLSHRVDSMELSGQKRQDMERQQARDITYMFLECVRGKKRAAERI
LQWLEDATSQLIDNQGLERDSTEASQQWTLPVSFCIVHYLPYTCVFLEDCAKADNWLQFT
CFVQTHQYPKDQVLKMAGKFNSPHLAEHLKLAFDSLKYTAGSSLKARHILFSGSDIMSGD
GVRKKKDEGGKTEGQSGVRDIRSQFYMRMGLARGKDNVLSTVDENKPAYSEPFHTHTPVS
TIKRQKSPKAVSSTDGSEQEDEDTGLSSTEPQDKTESATVSSAESAPPGNGTAITLTVSA
EEKEVDPSSCPDDLFSVLFKCQNTSCPWRSLLAHAVALTAPVLAVLAACYEESQLLDCLC
VWLVTSLPPSSSVPATAHIPNIQWHHWCLQDLDRVILVAMGTNHIKTLARGVQIFQTESP
LVPLFEFAEAFSVKKEYSSSHLLLHKFKDVLGTTRKTPEGRSSTVIKTFGTIDWLESVAV
SVFSKLMSAASHQERSLLLGVLSDTAIQRVFTREVPDYVRIHQLNQLLKETGVRMCVWRM
MDITSTQYQEECGQVLVSLQDKKQFEVARQFARLAGLPTGSITVQELLEDLSQLKRSSLW
LQEAARVGFWRQCEDKLRRHHTPAAMSTDFFQTQAEGLVVEVSDSEYVKVLSNSWEKALL
LSMAHRWLASDSDHPPSPEMLENLEERMWKSCIQAEVEKEEGGSSVITMSTLLGTPTDYR
QELLQMYGKMPVETQVSDSLLTTERECRALDSIIGKLLDQGNISQACKLATQFQFYSQDL
CIILTCLRLVHGTTLVEDIPDRMKALSVSGPRRKIMSLSQSLPRSISISSISSHASTLSG
WTTVDVDDVSNTIEVLADCCVQGKDCCNRILAGYKVAQSLDWSFQKVVSSEEFSTLQDLL
VSDVHHKLRLAKDFIKYNHMGEQQVAGFLADAILHSLKVFTGETAPDADSPRTASELVFH
PSDGTEGFLKLTKLCSDPAILGNMLLDRATSLEGSLLETSRGAFSVQVELLIRAHDCHTL
CCNMEGISSTLKTARSLSTTLAQAGEFALMIRLLTGIGRFSEMTYIFDTLRKYHQFELLF
RKGIDKEDKLKLALLDYLKRYHPADKDTYTMVCLSFSMYREIAEMMETEAHRSMKKLEKV
TLEQTPQIQSSLQNIVTFFSDAAESYAKEECLRHASSCIQQARLVALQIHLLGQGCRVIN
LQGKDVVKFISQHGKFLDALIVAEAYGKQSEWSSALYNNVVLSGDFRYLDDYLAHLSLNS
GMFVDIVGRYHRDGSKSSQVAGNLKKLLGYCREVQVTYRLATEMGFNDLCLQLLEGDGGA
YLRDVA
NT seq
7941 nt
NT seq
+upstream
nt +downstream
nt
atggaggcactggaagaaactttgcagtttgttcttcaaaaacgtcagacttctgtggat
attcaacacgtccgtgaagccaaaatctgcacaaagataggaacgactgcccttctgaat
gaggattccacgataagccttttgaagctaggaggatgtgaacagaccagatcctgtctc
agggatatcagatgtttcaaatgggaagagagaggggcttcctcaagtgtgggtccatac
agcactgctgattcatccattgcggtggtgacgactaatggtaccctgcagctgcacagt
gttggatgtggccagtctacagaactgactacaacatgtctgggctcctgctgtgttcag
gatgtaataggcccaggtgctgtggatattgtggaggtaggagcagatgtggtgactgtg
ttagttgctggcagactcctgtgtaaactggctgttagtgaagaagtacttactgtcatc
agccagataaagcttcaggatgaagctgtagatgtcaaacagacaaaggttgtgtctggg
atcttgttttgtctgcaggaggatggagttgttgatatcttttttgtggcatccggtaga
aagctaggtacagttgtcataaacaagtacctgtctgtcagaaacgagccccttgcttct
gaagaacatcaaaacttatcatgttttgatatttccaacaacctgacatcacttgtagtc
ggcaacagcagcaatattcataatgtgaatctgaatgagtacttcacgcttttcccccac
cacctctgctctgtaatagaggaccagaatcaaccagtcagaaggtttgaaggcatcaat
gaagatgacttggggtcttttcagtttctgtcaagagaagtagctgacagaagctggaaa
agtcacttgtggcaggtcaaaaggaaagtgatggaaagaagtttcttccaacggtctgga
agaaagacaggtgttagccacccagccccatcatactttgcagcagaaaaggaagcacgg
tactggtttgaagatgtgccagagattagtgcctcctttaagaaaagaggaaaggacctt
ggaatgcatctcagctacatgagaaagcctctcacaacctcagggtttgctgcttcaaga
aaagtaggaagacccacagccagggaagtttgccaaggttcagaggcactcagcaatgcc
tccttacctctaccagtggaagtgcaaggccttgaactgatgttgctgacagtggcagat
accacagccgtcgcatggtttagccccaagcaagacaaggatggaaaccatgggtttgtc
tgtcagtacaacctttccacaggaacatgcaagaatcacaggttgaaggagccatcagtg
gttgttcagagtgatgaccatctccacccacacctcctcctgacagacatcaccctgtca
gctgtagcctgggctgccccacaggaggagctggtcaaccagctgatgctgtatgctggt
gcttctgtggctgagtctctgtgccatataaaccactgggacccatgttccatccccatc
cacacactggaggtgggcctgaggcatcgccaactggacactgtcgccttctttctgaag
agtagggagaacgtgttccgacccaaatcaagaactccagctcaaagccccttatccccg
acaccccccagtcctcccccagcacccagtctggacacacttcaactcagagcagccata
gatctgcttgtctctgccatccacgagaacatcaaggaaccaccgtccaaacagtttgca
gaacaacttctgcacctgacactggaccacctacatctgctcatcaggacagccactgag
ctggcagcagatacatctcatcatccttttgatccttctgtcgacttgcctggcccagtg
gcttcaccaggctttacagtggacaggccacaactggagcagtgtgtacagacattgatg
ggctatgttgtggagttaaggcatttcctgaaaaggcctgcagtcagcagccaaactggg
ggtgtggaaagctttgttcaaaaagcactgtctggtgaaggagcctacacactacaactc
ttagatgaagatgataaatgcttgaagaggtgggaggcaatggataaagaggccatgatt
tgtgatgccatcctgacgtccaacatcccgttggctcagtcctgcctgcaggagcgagcc
tttggtcagagctccggccatgtccaggcaggcaagctgaccagcgttactgacctcggc
ctgaacatggccctacagtgtctggtagacaaagacttacaacaggcctggaaactactg
gccaatatgggttatgaggtgactcaacaactgcatagaatctgtttctacactccaaac
agagcactgagggacttcttggttgaagaactcctgaagtcaggttccctgtcagcagga
gaacaggctatggtccagtttgtccaacaagtggagagtctgtacacgtgtcagtccttt
caatctgccaaggccttcctacaggaaactgcaacaaaaagagaccctttgcaagctgtt
tcacaagatctgacagctcaagcttcggacttcctgtcgctgcacctccagtgtgaggag
atagggggagctggtcccatgaactgtgagaactccagctatgcccacctggtgctggag
tgggtacgtcattgggaccagcagacaagagaaagagtcctgctggagaggatgttggca
atggacacaaaagaggagcatgtcagcaagaatgtaagttgtgaatccacctgggcctac
ctaacgtcccatcacatgtggaacagccttctacagtggatacagaccagtttccctgta
gaggaagataaagagaaagttgtgactttcaccctgcagggcccactcacactacaggtg
atcaatcagcttgggtcctgcacaccatttctgaaggacagaatattggatgaacttgcc
aggagaggacaatttgtgtctgatgaactgttgaagtttgaggaccttctgcgaagacta
gcccggacacatcaggccatctcacacccccacgtcatggaaggggagcctctgaagagc
ctgtctgtcctagactaccaccacctgttcatcacatactgcgtggagaaacaactcccc
aacctgctgtattactatctggacttctatggtttaaatgaagaagatggcaaactgtgc
atccctgcagactgtgctccatgggtggacatgttggtccagttcagacacacagccagc
agatacacagatccatctgcagtattccaggccagtctgtccaatgcgtgtgtgttcctg
ggggccgactctgttactgtccagactatgttggaggagggacgagttctcatggccttg
gctactttgatgtatgcacctgaaaacatcacacaggcactgactgaaccagccactgat
tctgacaagcagtggaagatctgtccttctgttctgaagcgaaccctggctgcccatccc
aaactgcagtctgttttgtttcctacccacccattgggcacagtacctccacaagacatt
acactttatcagttacttcagcgcaactgccccttcgaccccagtcgactgtttggttgg
caggagatgaacacacttagctctggatcagattgcctgcaggatatgccccacttctct
caccaggagttggtatcccagtatgctcacaccgaagacctgcagttcacctactacctg
cggaggggcaggccttcttttgccttcgcaaagtttctatcagcagagatggaagcaaga
gggtcgctctcccaaagaaggcttttgcgggctagtttgaaagcgtattgcctggccctg
aggaacttcacccagccagctgtcacagcctcatgtgtgctgttcctggagatgctggga
gtggacagcaccaagctgcgggtggacgtgcagacagctaacactgtgctatcccacagg
gtggacagcatggagctgtctgggcagaagagacaggacatggagagacagcaggccagg
gatatcacatacatgtttctggagtgtgtccgtggcaagaaaagggcagcagagcgcatc
cttcagtggttagaggatgcaacatcccaactcatagacaatcaggggcttgaaagggat
agcacagaggccagccaacagtggaccttgcctgtcagcttctgtatcgttcactatctg
ccctacacttgtgtgtttctggaggactgtgccaaggctgacaactggctgcagttcacc
tgttttgtccaaacccaccaataccctaaggatcaagtcttaaagatggctgggaaattc
aacagtccacatcttgccgaacatctcaagctagcttttgattccttgaagtacactgca
ggctcctctttgaaggctaggcacatcctgttctcaggtagtgatatcatgagtggtgat
ggagtgaggaagaagaaagacgagggtggcaaaactgagggccagtctggtgtcagggat
atcaggagccagttctacatgagaatgggactggccagaggcaaagacaatgtactgtcc
actgtagatgagaataagccagcctattctgaaccattccatacccacactcctgtgagt
accatcaagaggcaaaagtctcccaaagctgtgagcagtacagacgggtcagagcaagag
gatgaagacacagggttgtcaagcacagagccgcaggataaaactgagtctgccacagtt
agctctgcagagagcgcacctccaggcaatgggactgctataactttgacggtctcggct
gaagaaaaggaagtggacccatccagctgtccagatgatctcttcagtgtgctgttcaaa
tgtcagaataccagctgtccctggaggtcattgctggctcatgctgttgccctgacggct
ccggtactagctgtacttgctgcttgctatgaggagtcccagctcctagactgcctgtgt
gtgtggctggtgacgtccctccctccctccagctctgtccctgctacagcccacatcccc
aacatacagtggcatcactggtgccttcaggacttggacagggtcattctggtagccatg
ggaacaaatcacatcaaaacactggctagaggagttcagatcttccaaaccgaatccccc
cttgtgcccttgtttgagtttgcggaggccttttctgtcaagaaagaatactcttcttcc
cacctcctcctgcacaagttcaaagatgtcttgggcacaactagaaagactccagagggc
agaagttcaactgttatcaagacatttggtaccatagactggctggagagtgttgctgtg
tctgtgttcagcaagctgatgtcagcagcatcacatcaggaacgtagtcttcttctagga
gtgttgtcagacactgccatacaaagggtttttaccagagaagtgccagactatgtgagg
atccaccagttgaaccagctgctgaaggagacaggagtgaggatgtgtgtgtggaggatg
atggacatcaccagcacacagtatcaggaggagtgtgggcaggtcctggtcagcctacag
gacaagaaacagtttgaagtggctcgacagtttgccagactggccggactgcccacaggc
agcatcactgtacaagagctcctggaagacttgtcccagctgaagaggtccagcctgtgg
ctgcaggaggcagcgcgggtggggttctggagacagtgtgaggacaaactcaggaggcac
cacacacctgctgccatgtcgacagacttcttccagacccaggcagagggcttagtggtg
gaggtgtctgattcagaatatgttaaagtgttgtccaattcatgggagaaggccctgtta
ctgagcatggcccaccgttggcttgcctcagattcagaccacccacccagcccagaaatg
ctggagaatctggaggagaggatgtggaagagttgtatacaggctgaagtagagaaggaa
gagggtggttcctcagtcatcaccatgtccactcttctggggactccaactgactacaga
caggagctgctgcagatgtatgggaagatgccagtggagactcaagtctcagatagtctt
ctcacaacagaaagggagtgcagggctctggactccattattgggaagttactggaccag
gggaacatcagccaggcctgtaaactggcgacacagttccagttctacagtcaggacttg
tgcattatcctcacatgtctcagactggtccatgggaccacactagtggaggacatccca
gacaggatgaaagccttatcagtgtcaggccctcgtaggaagatcatgtcattgtcacag
tccctgcccaggtccattagcatctccagtatttccagccatgccagcactcttagtggc
tggaccacagtggacgtggatgatgtttctaacaccatagaggtcctggctgactgctgt
gtacaaggaaaggactgctgtaacaggatactggcagggtacaaagtggcacagtccctg
gactggagtttccagaaggttgtgtctagtgaagagttcagcacactacaggacctgctg
gtgtctgatgttcatcacaagctcaggctggccaaggacttcatcaagtacaatcacatg
ggagagcaacaggttgcaggcttcctggctgatgccatactccattcccttaaggtcttc
actggagaaactgctccagatgcagactccccccgtacggccagtgagctggtgtttcac
ccatcagatggtacagaggggtttctgaagctgaccaaactttgctctgaccctgcaata
ttgggcaacatgctgttggatcgtgccacttctctggaggggtcactgcttgaaacttcc
aggggtgcattttctgtgcaggtggagctgctgatcagagcccatgactgccacaccctc
tgctgtaacatggaggggatatcctccaccctgaagactgcccgcagtctgtccaccacc
ctggcacaggccggagagttcgccctgatgatacggttactgaccggcatcgggcggttc
agcgagatgacctacatatttgacaccctgaggaaataccaccagtttgagctgctcttc
agaaaggggattgacaaggaggataagttgaagcttgccctgctggactacttgaagagg
taccaccccgccgacaaggacacctacaccatggtgtgcctgagtttctccatgtacagg
gagatagcagagatgatggagacagaggcacacaggagcatgaagaaactggagaaagtt
actctggaacaaactccccagatacaaagcagtcttcagaatattgtgacattcttcagt
gatgctgcagagagctatgcaaaggaggagtgcctacgccatgcctcctcatgtatccag
caggcccgcctggtggcactacagatccacctgctgggtcagggctgcagggtcatcaac
ctacagggcaaggatgtggtcaagttcatctcacagcatggcaagttcctggatgcgttg
atagtagcagaagcctatggcaagcagtcggagtggtcctcagccctgtacaacaacgtt
gttctgtcaggagacttccgttatctggacgactacctggcacacctgagcctcaacagt
ggcatgtttgtagatattgtgggaaggtaccaccgggatggcagtaagtccagccaggtg
gcaggtaacctgaagaagctgctgggatactgcagggaggtgcaggtcacctacaggctg
gctactgagatggggtttaacgacctctgtctgcagctgttagagggagatggaggggct
taccttagggatgtggcatga
DBGET
integrated database retrieval system
