Branchiostoma belcheri (Belcher's lancelet): 109472564
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Entry
109472564 CDS
T07532
Name
(RefSeq) ATP-dependent RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109472564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbel03019
]
109472564
03012 Translation factors [BR:
bbel03012
]
109472564
Enzymes [BR:
bbel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109472564
Messenger RNA biogenesis [BR:
bbel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109472564
Translation factors [BR:
bbel03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109472564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
nSTAND3
AAA_22
ATPase
AAA_14
Sigma54_activat
NACHT
AAA_19
NPHP3_N
AAA_23
NB-ARC
PhoH
ABC_tran
TsaE
AAA_7
Myosin_head
Motif
Other DBs
NCBI-GeneID:
109472564
NCBI-ProteinID:
XP_019627907
UniProt:
A0A6P4Z9Z4
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MNTASVSSASRLYNYSKGLFRDILAKSANCRGTVMAEGYGGYGGQRGGHGRRGRGGGHRG
WRGHHQGSSRSHWSGGEERSFSSGGSGGWGGGRGGRGGRGRGHPSGLRGKDIGLFYARKS
KDREKRERSVVQMDHSQEQHLSQLLTHLRRDDTPGDRWRDDSAASQQPVRTGQDWFEQDG
ADNSGSGSSSQRFDSSGRNSSSAPPTGRNPQDSEKESWASETSWGDPKESCASPDAVLPV
QNRDEALDERLKVELDQTRSNNNQYRRMQEFREKLPSYNMRQELLQLIHKNQVVVISGET
GCGKTTQVAQFILDDMIERGQGSLCHVICTQPRRISAVGVAERVASERGERCGEGGSTGY
SIRLENKLPRPKGSILYCTTGIILKRLLSDPYLGGVSHLILDEVHERDLLSDFLTIIVRD
LLQKRPDLKLVLMSATLNADQFSTYFGNSPMSNIPGFTFPVEDLYLEDVLELTRYDPPEA
QSKPQRRVYGRKRREEMEERMEREEEERQELREYLQTISRRYSSRTLDSLERMDHQNLDL
NLTMELIKYITYNKPDGAILVFLPGWDQISKVNDMLASQGMSKSGKFRIIPLHSMMPTVN
QTQVFERPPKGVRKVVLATNIAETSITIDDVVYVVDCGQVKEKNFDITNNLATLQPVWIS
KASAKQRRGRAGRVQPGVCYHLFSRLKESNMQEYQLPEILRTPLEELCLQIKLMKLGAIL
PFIEKAMSSPSLRAVQLAITNLKDLNALDRQENLTPLGYHLARLPVEPHIGKMILFGAIF
SCLDPVLTVAASLGFKDPFVIPLGKEEEADRRRREFAAGSKSDHLMLINAFKSWERAKSQ
GRESERRFCWDNFLSVNTLKMLSNMKLQFAELLQDIGFVQTRNPSNPQCNKNSGNIRLVK
AVICAGLYPNVAKVRGPKQHFRKRPPKLVTKHEKVQLHPKSVNADEKYFEDGWLIYHMKM
KTTQVFLYDCTMISPYPLLFFGGDITIQKDGNQETVAVDNWIIFRAATRTAKLVKGLRHE
LDTVLQQKITRPGGINWDEDSKEGQLMRGIIQLITTEDSSQDYEEEDYNSDD
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagcttcagtttcttcagcttcaagactctacaattactcaaagggacttttc
cgagacatcttagcgaagtcggcaaactgtagagggacagtcatggcggaaggatatgga
ggttacggaggtcagaggggaggtcacggtcggcgaggtcgtggtggtggtcatcgtggc
tggagaggtcatcaccaggggtcatccaggtcacactggtcaggtggggaagagaggagc
ttctcatcaggtggatctggaggctggggtggtgggagagggggtaggggagggaggggg
aggggacatccctccggcctgagagggaaggacatcggactgttctacgccagaaaaagc
aaagacagggagaagagagagcgttcggtggttcagatggaccatagtcaggaacagcac
ctgtcccagctgttaacacacctgcggcgagatgatacacctggggacaggtggagggac
gactctgcggcaagccaacaaccagtcagaactggtcaggactggtttgaacaggacggt
gcagataactcaggatcagggtcatcttcacaaagatttgacagcagcggtcggaactcc
tcaagtgcgccaccaacaggtagaaaccctcaagactctgagaaggagtcttgggcctct
gagacgtcttggggtgatcctaaggagtcttgtgctagtcctgatgctgtcctgcctgta
cagaacagggatgaggcactggatgaacgtctgaaggtggaactggaccagacaaggagc
aacaacaaccagtacaggaggatgcaggaattcagagaaaagctgccatcttacaacatg
agacaggaacttctccagctgattcacaagaaccaggtggttgtcatcagtggggagaca
ggatgtggcaagacgacacaggttgctcagttcatcctggatgacatgatagagagaggt
caggggtcactgtgtcatgtgatctgtacccagcccaggagaataagtgctgttggggtt
gcagaaagagtagcatctgagagaggagagaggtgtggggaggggggcagtactggatac
tcgatacgactggagaataaactaccccgacccaaaggctctattctctactgcaccact
ggtatcatcctcaaaaggctgctgtctgatccgtaccttggaggagtgtctcacctgatc
ttagatgaggttcatgagagagacctgctgtcagacttccttactattattgtcagggac
ctgttacagaaaagacctgatctgaagctggttttgatgagtgcaaccctgaatgctgac
cagttctccacatactttggaaacagtccgatgtctaacatccccgggttcaccttccct
gtagaggacttgtacttagaagatgtcttggaactcaccagatatgatccccctgaagcc
cagtccaaaccccagaggagagtctatggcaggaagagacgagaggagatggaagaaagg
atggagagagaggaggaagaaagacaggagctgagggaatatttacaaaccatatctaga
agatattcctcgaggacacttgactccctggagaggatggaccatcagaacctggacctg
aacctgaccatggagctcatcaagtacatcacttacaacaagcctgatggagctatcctg
gtgtttctaccaggctgggaccagatcagtaaggttaatgacatgctggcatcacagggc
atgtcgaaatcaggaaagttccggatcattcctcttcactcaatgatgccaactgtcaat
cagactcaggtatttgaaaggccaccgaaaggggtgaggaaggttgtattagcaacaaac
atcgctgaaacaagtataaccatagatgatgtggtgtatgttgtggactgtggacaagtg
aaagagaagaattttgacatcacaaacaacctggccacactacagcctgtatggatcagt
aaggcatcagctaaacagaggagaggcagggctgggagggtacagccaggtgtgtgttat
cacctgttctccagactcaaggagtctaacatgcaggagtaccagctacctgagatcctc
aggacacccctggaggaactctgtctgcagattaagctgatgaagttgggagctattcta
ccatttatagagaaggccatgagttctccttccctcagggcagtacagctggctatcact
aacctcaaggacctgaatgccctggacagacaagagaacctgacacccctagggtatcac
ctggccagactgcctgtagagccccacattggaaagatgatcttatttggagccattttc
tcctgtctggatccggtcctcactgtggcagccagtctggggttcaaggatccatttgtc
attcctctgggtaaggaggaggaggcagacagaaggaggagggagtttgctgctgggagt
aagagtgaccatctcatgctcatcaacgccttcaagagctgggagagagcgaagtcccaa
ggtcgtgagtcggagagacgtttctgctgggacaacttcctgtcagtcaacacactcaag
atgttgtccaacatgaagctgcagtttgctgagctgctgcaggacatcggctttgtgcag
accagaaatcccagcaaccctcagtgcaataaaaactctggtaacattaggctggtgaaa
gctgtgatctgtgcagggctgtatccaaatgtggcaaaagtcaggggaccaaaacagcac
ttcagaaaaagaccgcccaaactggtgaccaaacatgagaaggttcagcttcacccgaag
tctgtcaacgctgatgagaagtactttgaggacggctggctgatctaccacatgaagatg
aaaactactcaggtattcctgtatgactgtactatgatctctccataccctctactcttc
tttggaggtgacatcacaatacagaaggatggtaaccaggaaacggttgccgttgacaac
tggatcatcttccgagctgcaaccaggacggccaaactggtcaagggtctaagacatgaa
ctggacacagttctgcagcagaagatcaccagaccaggagggataaactgggatgaggac
agtaaggagggacagctgatgagggggattatccagctcatcactacggaggactccagt
caggattacgaggaggaggactataacagtgatgattaa
DBGET
integrated database retrieval system
