Branchiostoma belcheri (Belcher's lancelet): 109474524
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Entry
109474524 CDS
T07532
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109474524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbel03041
]
109474524
Enzymes [BR:
bbel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109474524
Spliceosome [BR:
bbel03041
]
Complex C
Other components
Step II factors
109474524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
GIPC1_GH2
AAA_22
AAA_19
nSTAND3
AAA_16
PhoH
Motif
Other DBs
NCBI-GeneID:
109474524
NCBI-ProteinID:
XP_019630390
UniProt:
A0A6P4YLP1
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MADELQKLEHLSLVSKICTELDNHLGINDKDLAEFIIDIAEKNKTEDAFKKALSENGGEF
PESFASNLLRIIQTMKPSARPKGDDGSVKKKKKKPKTKLEEKKELFPFLAMKDEPAPQKL
LDDEAVAASAMDELEALLGKAKDTEQVKTEDRREKDRDKRRRHSRSRSRSRERKKDRKRH
RSRSRSRERDRRRRHSRSRSRDRDRHDRRRDREEKPREKERYRERERDRDRDKGTSDKFV
THAPPAEPVVGHIYNGKITNIMQFGCFVQLEGLRKRWEGLVHVSELRREGRVSNVGDVVV
KGQRVKVKVLSFTGTKTSLSMKDVDQDSGEDLNPSRIRGGVGGEVSDDVGARNPDRPSNL
PLISVPEEENQGPVKKVQRISSPEKWELKQMAAANVLNPCDLPDFDEDTGVLPKDDDSDE
DIEIEMKEEEPAFLQGRTKQSMDLSPVRIVKNPDGSLAQAAMMQSALSKERREVKAQQRQ
AEEDSIPADLNKHWVDPMPDVEGRQLASALRGLGAFPQDMPDWKRAAFGGNKASYGKKTQ
MSIIEQRQSLPIYKLKDELIDAVTQNQILIVIGETGSGKTTQITQYLAEAGFTVRGKLGC
TQPRRVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDVTSPETKIKYMTDGMLLRECLIDGD
LSQYSVIMLDEAHERTISTDVLFGLMKKAVHKRPDLKLIVTSATLDAVKFSQYFFEGPIF
TIPGRSFPVEILYTKEAETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILFE
RMKTLGPEVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVV
DPGFVKQKVYNSKTGMDALVVTPISQAQAKQRSGRAGRTGPGKCYRLYTERAYRDEMLPT
AVPEIQRTNLASTVLNLKAMGINDLLSFDFMDSPPMETMVTAMEQLHYLSALDDEGLLTR
LGRRMAEFPLEPNLSKMLIMSVHLGCSDEVLTIVSMLSVQSVFYRPKDKQALADQKKAKF
HQAEGDHLTLLTVYNSWKNNKFSNAWCYENFVQARSLRRAQDIRKQMLGIMDRHKLDVVS
CGKGTVKVQKAICSGFFRNAAKKDPQEGYRTLVDQQVVYIHPSSALFNRQPDWVVYHELV
LTTKEYMREVTTIDPRWLVEFAGAFFKFSDPTKLSKQKKQQRLEPLYNKYEEPNAWRISR
AFRRR
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaactacagaagttggagcatctttccctggtgtctaagatctgtacggag
ttagacaaccatttagggatcaacgacaaggatctcgcggagttcatcatcgacatagca
gaaaagaacaaaacagaagatgccttcaagaaagctctgtcggaaaacggaggggaattt
cctgaatcctttgcctcaaacttacttcgaattatccagaccatgaagccaagtgccaga
ccaaagggcgatgatggtagtgtgaagaaaaagaagaagaagcccaagacgaaacttgag
gagaagaaggagttgtttcccttcctggcaatgaaggatgaaccagctcctcagaaactt
ctggatgacgaggcagttgcagccagcgccatggatgaactagaggctctgcttgggaag
gctaaagatacagaacaagtcaaaactgaagatagaagggagaaagacagagacaaaagg
agacgccacagcagaagtaggagcagaagcagggagaggaagaaagatcgcaaacgtcac
cggtcgcgctctcgcagtcgagaacgggaccggagacggagacattcccgatcgcgcagc
agggacagggacaggcacgacaggaggagggacagggaggagaaacctcgggagaaggag
agataccgggagagagagagggatagagacagggacaaggggacgagtgacaagtttgtc
acccatgcgcccccggcagagcctgttgtgggacatatctataacgggaagatcaccaac
atcatgcagtttggctgttttgtacagctggagggattgcgcaagaggtgggagggactg
gtccatgtttcagagctccggagagagggcagggtgtccaacgttggtgatgtggtggtc
aagggtcagagggtaaaggtcaaggtcctgtccttcacaggcaccaagaccagcctgtcc
atgaaggatgtagaccaggactcaggagaggacctaaaccccagccggatccgtgggggg
gtcgggggcgaggtgtcagacgacgtgggtgccaggaacccagaccgtccgtccaacctg
ccgctcatctccgtaccagaggaggagaaccagggacctgtcaagaaggtccagcggatc
tcatcgccggagaagtgggagctcaaacagatggcagcagcgaatgtgctgaacccgtgt
gacctgccggactttgatgaagacacgggcgtcctgccgaaagacgacgactctgatgaa
gacatcgagatcgagatgaaggaagaggagccggcgttcttacaggggcgcaccaaacag
agcatggacctcagtcctgtcaggattgtcaagaaccctgacggctcccttgcgcaggcc
gccatgatgcagagcgcgttgtcgaaagaacggcgggaagtgaaggcacaacaacgacag
gcggaggaggactccatcccagcagacctcaacaagcactgggtcgaccccatgccagat
gttgaaggcagacagctggccagtgccctgcgaggcctgggtgccttcccacaggacatg
cctgactggaagcgagctgccttcggagggaacaaggcttcttacggcaagaagactcag
atgtccatcatagaacagagacagagtcttcctatctacaaactcaaggatgaacttata
gatgctgtgactcagaaccagatcctgattgtgattggtgagacgggcagcgggaagacg
acacagatcacacagtacctcgccgaggccggcttcacggtcagggggaagctgggatgt
acgcagccccgccgtgtggccgccatgtctgtcgccaagagggtctcggaggaatttggc
tgtcgtttagggcaagaggttggctacaccatccgttttgaagacgtgacgagccctgag
acgaagattaagtacatgacagacggtatgctgctgagggagtgtctgatagatggagac
ctgtcccagtactctgttatcatgttggacgaggctcatgagagaaccatcagcacggat
gttctgtttggactcatgaaaaaggccgtgcacaagcgcccagacctgaagctgattgtg
acgtcagccaccctggatgcggtgaagttctctcagtacttcttcgagggtccgatcttc
acgatccccgggcggtccttcccggtggagatcctgtacaccaaggaagcggagacggac
tacctggacgcttccctcatcactgtcatgcagatccacctcactgagccgccaggtgac
atcctggtgttcctgacgggtcaggaggagattgacactgcgtgtgagatcctgtttgag
cggatgaagaccctcgggccggaggttccagaactgatcatcctgccggtatactccgcc
ctccccagcgagatgcagaccaggatctttgaccccgctcctcccggcagtaggaaggtt
gttattgcaaccaacattgcagagacctcgctgaccattgatggtatttactacgtggtg
gaccctgggtttgtcaaacagaaggtctacaactccaaaactggcatggacgctctggtg
gttacacctatctcacaggctcaagcaaagcagcgttcaggccgtgccgggcggacgggg
ccggggaagtgttatcggctgtacacggagcgggcgtaccgggacgagatgctgcccacg
gccgtgcccgagatccagcgcaccaacctggccagcaccgtgctcaacctcaaggccatg
ggcatcaacgacctgctgtccttcgacttcatggactccccacccatggagaccatggtg
acggccatggagcagctgcactacctcagcgcactggacgacgagggactgctcaccaga
ctgggcagaaggatggcagagtttccattggagcccaacctgtccaagatgttgatcatg
tccgtgcatctgggctgcagtgatgaagtcttaaccatcgtgtctatgctgtctgtacag
tcagtcttctacagacctaaggacaaacaggcccttgctgaccagaagaaggcaaagttc
caccaggcggagggtgaccacctcaccctgctgaccgtctacaactcctggaagaacaac
aagttctccaatgcctggtgctacgagaacttcgtgcaggcgcgctcgctgcggcgggca
caggacatccgcaaacagatgctgggcatcatggacagacacaagctagatgtggtgtcc
tgtggtaagggcacagttaaggtacagaaggccatctgtagtggtttcttccggaacgct
gcaaagaaggacccccaggaggggtacagaaccctggtggaccagcaggtcgtctacatc
cacccttccagcgctctgttcaacaggcagcctgactgggttgtgtaccatgagttggtg
ctgacgactaaggagtacatgcgtgaggtcaccaccatcgaccctcgctggctggtggag
tttgccggagccttcttcaagttctccgacccgaccaaactcagcaagcagaagaaacag
cagcgtctggagccgctctacaacaagtacgaggaacccaacgcctggagaatatcaagg
gccttccgcaggagatag
DBGET
integrated database retrieval system
