Branchiostoma belcheri (Belcher's lancelet): 109474533
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Entry
109474533 CDS
T07532
Name
(RefSeq) PMS1 protein homolog 1-like
KO
K10864
DNA mismatch repair protein PMS1
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbel03400
]
109474533
DNA repair and recombination proteins [BR:
bbel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
109474533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
CHDNT
Motif
Other DBs
NCBI-GeneID:
109474533
NCBI-ProteinID:
XP_019630409
UniProt:
A0A6P4Z946
LinkDB
All DBs
Position
Unknown
AA seq
1082 aa
AA seq
DB search
MAAVTDGARSLQPLPAATARLLSSTQVITSVFSVVKELVENSLDAQATSVDVKLESFGFE
KIVVSDNGSGISRADAEYMAQRHYTSKLSHQTDLDSLETYGFRGEALGSLCAVADVTVTT
KTAADDFSMTYTLDRQGKVTNSKPAHLGQGTTITVTNLFKNVPVRRQYYSAPKRRKEELK
RVDDILMAFGIIKPDVRFSLIHNKSTVWQKNKSADHRSALLKVLGTGTMALLQGVEHRSL
EPQVDVHGFLPKPGADPQAVTRAATDRSFVFFNERPVQMKGVEKLVRQYYHGSTSEGGSS
RHPIIFLSIRVPPAEIDPNVEPNKTKVLLHHNDSILSVIEEMLQTVYSSSDDSSHDNTTG
TCDETRKISHNSTSALDTNKLQNTLEDEQLSCAYSSTKSTNEEDLTEGAKTASIDCDIQE
SEKERRVENGHGSHAAVTVHVDDEIMDVEHLGTEENTTLDTRTTSDISSCDSDVTMGDSI
LAEIKTPDTSSTRPHRPGEESELSFFSIPDSLLAGVESQESLQPADKLREDSQISFSISS
SFLGDLPTPSPAKTVRKDEDGVSFNLLTQASLSLVLSDEEKEENDKEGREESEGLATNTS
NSANQTLKKGGIPPLPSLDGDSPTSTNQKEDGISTANEVSAKTWSEGRGLVNSVGEPIEP
VRLLVPGAANQGPEKSPHTGIDRGSPGRKNTILEKEGHTTMYDLVGNKPVKKPQSAYSFF
IKDVRPNVCQENPEADFAEIARLIGQCWNELANQERQRYEAMATRDQQRYQAHLQTLQER
ESNASADSPVPRKNRLTTKKRRLDPVSHQNLIDKMFQSQKLRKEKEGNKEPVLKVVDVSF
RMTWLKERVGKEEISNRSDGGDGSLRLIGRLAPHGVWVGVQGSEVVAVHQYRIQEALLYN
RLMETHVLPRQPLRVPVVLNESTIGGSLAWQTLQNMSSESAHPGPARRISDPRLVSNGFD
VQLTSDEDGNQRAEIVAMATCMPFYGVEDLKETLSLISTTNSTTVSSSRPFKVKHYLQGE
AVRMSRSLSSTMSRDEVCEILRRKDRELPRCRTCLHSRPFIQGIYTLEELYSQGSQSHSQ
EQ
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtaaccgatggtgcgagaagcttacagccgttgcccgcggcgacggcccgc
ctgttgtccagtacacaggtcatcacctctgtcttcagcgtggtcaaggaactggtggaa
aactcgctggacgctcaggccaccagtgtggacgtcaaactggagtcgtttgggtttgag
aagatagttgtaagtgacaatggcagtgggatcagccgtgcagatgctgagtacatggcc
cagcgacattacacctccaaactgtcccaccagacagacctggacagtctggagacttac
ggcttcaggggagaggcactgggttctctctgtgctgttgctgatgtgacagtcaccacg
aagacggcagctgatgacttcagcatgacctacacactggacagacaggggaaggtcact
aacagcaaacctgcacatctgggacaaggtacaactataacagtcacaaacctgttcaag
aatgtcccggtgcgccgacagtactacagcgcccccaagcggcgcaaggaggaactgaag
cgggtggatgacatcctgatggcgtttggcatcatcaaaccagacgtcaggttttcactc
atacataacaagagcacagtgtggcagaagaacaagtccgccgaccaccgcagcgctctg
ctgaaggtactgggtactggcaccatggcactactgcagggtgtggagcacaggagtctg
gaacctcaggtagatgttcatgggttccttcccaagccaggagctgacccccaggccgtc
acacgggcagcaactgaccgctcttttgtctttttcaatgagagaccggtccaaatgaag
ggagtagaaaagctggtgcgtcaatattaccatggcagcacgtctgaaggaggttcctca
cggcatcccataatattcctcagcatcagggtaccccctgcggagattgacccgaacgtg
gagcccaacaaaaccaaagttcttctgcatcacaacgattcgatcctgtcagttattgaa
gaaatgttgcagactgtatacagctcttctgatgactcaagccacgataatacaacaggt
acatgtgatgaaaccagaaaaatatcacataacagtacaagtgccctggacaccaacaaa
ctgcaaaacacacttgaagatgaacagctgtcctgtgcctatagttcaactaaaagtaca
aatgaagaagatttaacagaaggagcaaagactgcatcaatagactgcgacattcaagag
tcagaaaaagaaagacgagttgaaaacggtcatggtagtcatgctgcagtaacagtgcat
gtagatgatgaaataatggatgtagagcatttgggtacagaagagaatacaactttggat
acaagaacaacaagcgacatctcaagttgtgactcagatgttacaatgggggactccata
cttgctgagatcaagacccctgacacctcttccacaaggccccataggccaggagaggaa
tcagaattatcctttttctctatccctgactcattgctagcaggagtggagtcacaagag
tctctgcagccagcagacaaactacgtgaagattctcagattagtttttctatttctagt
tcttttctcggagaccttccaactccaagtccagctaaaactgtaaggaaagacgaagat
ggcgtcagtttcaacctcctgactcaagcttccctcagtcttgtgctaagtgatgaagaa
aaagaagaaaatgacaaagaaggaagagaagagagtgaaggtttagctacaaatacttca
aattcagccaatcagacacttaaaaaaggtggaattccccctctcccttcattggacggt
gacagtcccacctcaaccaatcagaaagaggatgggatttcaacagccaatgaggtttca
gcaaagacatggagtgaagggaggggattggtcaactccgttggagagccaattgaacct
gtgagactattggtccctggagcagccaatcagggaccagaaaagtcaccacacacagga
attgacaggggaagcccaggaaggaaaaacaccatcctggaaaaggagggccatacaacc
atgtatgacctggtagggaacaaaccggtgaagaagccacagtcagcctacagtttcttc
atcaaggatgtcagacctaatgtttgccaagagaacccagaagctgactttgcagaaatc
gctcgcctcattggtcaatgttggaatgagctggccaatcaggagaggcaaagatatgaa
gccatggcaaccagagatcaacagagataccaggcacatcttcagacactgcaagaaaga
gaaagtaacgcatctgcagattcgcctgtaccaaggaagaacaggctgaccaccaagaaa
aggagattggacccagtttcccaccaaaacctcatcgacaaaatgttccagtcacaaaaa
ttaagaaaggaaaaagaaggaaacaaagagcctgttttgaaagtggtggacgttagcttt
agaatgacatggttgaaagagagggttgggaaagaagaaatttccaacaggagtgatggg
ggcgatgggtcccttcgtctgattggccgactggcaccacatggggtgtgggtcggagtg
caagggtcggaggtggttgcagttcaccagtacaggatacaggaggcgttgctgtacaac
aggctgatggagactcacgtgttaccaaggcaaccactcagggtgccggtggttctgaat
gaaagtacaataggagggtccctagcatggcaaaccctgcagaacatgtcgagtgagagt
gcccaccctggccctgctaggaggatctctgatccacgactggtcagcaacgggttcgac
gtccagctgacctcggacgaggacgggaaccagagggctgagattgttgccatggcaacc
tgcatgcccttttatggggtggaggatttgaaggaaactctgagcctcatcagtactacc
aacagcacaacagtatccagtagcaggccatttaaagttaaacactacctacagggcgag
gcagtgcgcatgtcccgtagtctgtccagcaccatgtcacgtgacgaggtgtgtgagatt
ctcaggaggaaggacagggagctgcccaggtgtcggacatgtctacacagccgacccttc
atacagggcatatacacactggaggagctgtactcacagggtagtcagtcacacagtcag
gaacagtaa
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