Branchiostoma belcheri (Belcher's lancelet): 109475727
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Entry
109475727 CDS
T07532
Name
(RefSeq) probable helicase senataxin
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbel03021
]
109475727
Enzymes [BR:
bbel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
109475727
5.6.2.5 RNA 5'-3' helicase
109475727
Transcription machinery [BR:
bbel03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109475727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
SEN1_N
AAA_12
AAA_30
AAA_19
Viral_helicase1
AAA_16
AAA_25
AAA_22
Polyoma_VP2
Motif
Other DBs
NCBI-GeneID:
109475727
NCBI-ProteinID:
XP_019632048
UniProt:
A0A6P4Z5Z5
LinkDB
All DBs
Position
Unknown
AA seq
2389 aa
AA seq
DB search
MPGSCLWCTCPERMRQLLPDSVSLRAPAWLNTVHQDLLYCWDCVLEYHHGREAVTRARPD
LAKVLTQKEVARLEENFTLSLDHHDNLDDAVAMETLHLPLLEVLKFPYLLLHQKLASLVE
RGIQALSTSGRPLILEEKSAGVYLLLVHPNRQIRKWAIKSVRSLGMVQPHQYEEIKPVIG
WLLSVVNFDLFENPGIGMDVDDPPCGMEDSVVLPPFLFDTCGYKDYWLGICLLLSSLDPS
TMRTQMFGASGHRHIPDAVLNAMEPQQGLKAGGFWPALQCLVVLFDRLGSRIWQFMSHDP
ATVFSTITQNKLFQKELLSMETCQGKKSSDAMVSSTSKHTPTKSQPSQLPASPSLFLERY
SVKQECDSSCQSQTSFYRQEPIRDSGSSTAAEDHCSQPITDSQAVYEASDWCLHQTNEAV
ALRIPEDDLPEVKLYSSIPDVLTAQTKSANVHTCAFTWFVPYVSSLIEFGEIAGEHLSSV
IMFLAEHSDHTMHGTPSYQCKLVEQCLTVLLHLLELLVSKNMHRLLLPTCRVWVSLALKH
CTGQKLSHKAMWSLAKHGTHGINQTCLKLLVSLLKQGVKIQQDDRSVQFLDKLNLHLFRK
RGPDRDPTSRALLSEVEVQEIQKCIEGILKAKVASSAMSAVVPSSMQCDQSEGREILHQP
IKCNDDRSVASPSAGPSWESCAYDDDEVDLLTTSSDDIDLTEAIKSVQKELDNLECNYND
YFEKEEDHPESPRDCLDPTIQGTDERMTSFREMSLVVKEEPSDSKQGGSKRTGHKSGTTD
KPSHAKGVNKEVGDSADTDILLLTGLLSENVAQKGSQRMMQNISLTPTRKEKSKATTSPA
FKKATGVKIKTEPQSEPTDRSCRVSTSLFQRTEQQKHTARKTLPSSLPVADRNTERTSPA
KVDHASPVASNKIRTARKSVMPYIQSTGSKESLLSCKEGVKDMISDIQGLPVHSRDIFVK
SEEGPPSSGISVKSEREPASFAQNTVQDNISDGAVSEDSVIVISDDDEDDMEDHRRQSGE
EKQDLHVQENRVNLLHLTLPNMQPKVVLRKLSPRTIEAHMSGRRAFFPQEQSRTNWEASA
SDSEEDSFPVSTGRQGKKQTFSSSGEDLSDIDSVPLSALVKMSSSKVDGDVISISDSSEE
PSSVDNAPHKMSSTGNRWKQKVLKKRRRSVVLSNSSDEDEDVRQDCVQPMTSEKAAKVEK
DPLASPGMQRKIKRKVSRLFGDSSSESDNEIDQGSINEHCRKNISNSFTSNVIEEEKSRD
SMSSEFSNEDPKQSQLSTCREMTSPGPSSRILSKLSLKAGRVDDQSSGQNSQTSQCKNDH
ESVSDAHTSKGSLTPKMEIVRIASASVHVDESKDAVTTQPSDTSNSRAFIASDSEDSTIV
PAGKAATTQSKLQNSPLKINSSVASKIRCQLLKNQHKSTDTTQSKVQSSDVEKGQHSSSG
ESKKRELTDMELLAADNKNSGTDSQEDTLATFLIDDNAEDHSYLMESSDQAWLDSESEKD
ERTKCFITKKFYKSCRRDAASTTQDTSTCASLKRKDSHHDNIFSSSIAPERKAGSTVEQN
TKKKRKIRHKDFEDNSTVRSKDFNKPRGRDAAHSLADTWHREDAWGGTNDAENGDTIDYD
EPVYFDFDLDEVPEEEQEHFLAQKFASSQETPKKKTARKKKVQHVQASKKLAKGKGGKRV
KTAARLRLTSRSTMLTETMIQTRRPHSKSSTEPAQTSTSQSSSLETSANQSARSSTDQPQ
LDQTDANLSEPPEGQPESALGVPISAQISTTAPSNSYKQKPAAVKPTIKELPPPKVQPSR
PVNPDYFLTCLLQWNPQWMEETTRPVLPFPCHGLQPVPQMFGSFDDYLKTFTPLLLLETW
EMICKERESANSKGPAAQMKVTVGTCFEARCLQLMHTHTLVKKQTSTPAEGDLLVLSADR
RRDQEQDSPTHVQAFGVVEKVIKQPNIGGSSDYWKLTVCIKVNPTTFPVTEGQTVNIQVV
TSLVVSQRQWSGLIFLHRSLLARDILRPRGPSVFSIQTDFSQRAHVVGRYNPMQRAAIAG
AAHAALQPFPLPRICLLQGPPGTGKSHTIVGLVRKIIQAGNPPPDGNPPVPPENKPRVLL
CAPSNAGIDELVRRMIREVRQGEEEKENTKRFYTGNCGDLNLVRLGRPASIHPDVQGFSL
DNIVEKQLKSFTKEVETSKERHIVVQLTALDVKIADLERECGMQRLMGNTHKQREVERKR
DTLQAQRDKLDKTNRQVQLKKDEYQREGTRIRQRVLMEADVVCCTLSTSGSNMLEQAISK
AGVARSIHFTCAIIDEAGQCNELDALIPLQYGMSKLILVGDPEQLPATVLSKKAQDLNFR
QSLFERLYRVFKPRPDNPVLMLDTQYRMHPAICAFPSHNFYCGRLRTDK
NT seq
7170 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcctgcctgtggtgcacctgcccggagcgtatgcggcagctgctcccggac
agtgtctcgctgcgagcgccggcgtggctgaacacggttcaccaggacctactgtactgc
tgggactgtgtgctggagtatcaccacggcagggaggctgtcacacgggctaggccggat
ctagcaaaggttctgacacaaaaggaagtggcaagactggaggaaaatttcaccctcagc
ctggatcaccatgacaacttggatgatgctgttgccatggaaacactacatttacccctg
ttggaagtgctgaagttcccctacctcctgttgcatcagaagttggcctcgttagtagaa
cgtggtatccaggccctgtccacgtcaggccggccactcattctggaggagaagtcagca
ggggtgtatctactactggtacatcccaacagacagatcaggaaatgggcgatcaagtcg
gtccgttccctgggcatggtccagccgcatcagtacgaggagatcaaacctgtgattggc
tggctgctgtccgtggtgaactttgacctgtttgagaaccctgggataggtatggatgtt
gatgaccctccctgtgggatggaagactctgttgtcctgcctccgttcctgtttgacacc
tgcggctacaaagactactggttaggcatctgtctcctgctgtcctccctggacccctcg
accatgaggactcagatgtttggggccagcggacacagacacatccctgatgcagtcctc
aacgccatggaaccacagcagggtctgaaggcgggtggtttctggccggcgctgcagtgt
ctggtggtgctgtttgaccggctaggctcacggatctggcagttcatgtcacatgaccca
gcaacagtcttctcaaccatcacccagaacaagctgttccagaaagaactgctctctatg
gaaacctgccaagggaagaagagtagtgatgcaatggtttcctcaacatccaaacacact
ccaactaaaagccagcctagtcagttgcctgcttccccatcccttttcttggaaagatat
tcagtaaaacaggagtgtgatagcagctgccaatcacagacaagcttctataggcaagag
ccaatcagggactccggtagtagcaccgctgcagaagatcactgtagccaaccaatcaca
gacagtcaagctgtgtatgaggcttctgattggtgccttcatcagaccaatgaagctgtt
gctctcagaatacctgaggatgaccttccagaggttaaactgtactccagcattcctgat
gtcttgacagcccaaacaaagtcagcaaatgtgcatacttgtgctttcacctggttcgtg
ccatatgtaagttcacttattgagtttggtgaaatagcaggagaacacttatcatcagta
attatgttccttgctgagcattctgaccatactatgcatgggactccctcatatcagtgt
aaactagtagaacagtgccttacagtattgctgcatcttttggaactgctggtgtccaag
aacatgcacagactgttgttgcctacatgtagggtttgggtttcgcttgcactgaagcac
tgtactggtcagaagttgtcgcacaaggcaatgtggtctttggctaaacatggaacacat
ggaatcaaccaaacatgcctcaagctgctggtgagccttctgaaacagggagtcaagata
cagcaagatgacagaagtgtgcagttcctggacaagctgaacttgcatttgtttaggaag
agaggtcctgacagagacccaacttcaagagcactcctgtctgaggttgaagtgcaggaa
atacagaagtgcatagaagggattctgaaggcaaaggtagcatccagtgcaatgtcagca
gtagtgccgtcttccatgcagtgtgaccaatcagaaggcagagagatattacaccagcca
atcaagtgcaatgatgatagaagtgtggcatcaccatctgctggtccctcctgggaatca
tgtgcttatgatgatgatgaagtcgaccttctcactacctctagtgacgacattgacttg
acagaagcaatcaagtctgtacagaaagaactggacaacctagaatgcaattataatgat
tacttcgaaaaggaagaagatcacccagagtctccaagagattgcttggaccccacaata
caaggtactgatgaaaggatgacttctttccgtgaaatgtcgctagtagttaaagaggag
ccctcagactccaaacaaggaggcagtaagagaactgggcacaaatctggaactacagat
aaacccagtcatgcaaagggagtgaacaaggaggtaggagactctgctgacactgatatt
ctactcctgacaggcctgttgagtgagaatgtagctcagaaaggctcgcaaaggatgatg
cagaacatatctctcaccccgactcgcaaggagaagtccaaagctacaaccagcccagct
ttcaagaaagcgacaggagtaaagattaaaactgaaccccagtcagagcccactgatcgg
agttgcagagtgtctacaagtttattccagagaacagagcaacagaaacacactgcacgt
aaaactctcccatcctcactaccagttgcagacagaaatacagagagaacttctccagct
aaggtagaccacgcgtcacccgtggcaagtaacaaaattcgcactgcacggaagagtgtc
atgccgtacattcagagtactggaagcaaggagtctttactttcctgcaaagaaggtgtt
aaagatatgatttcggacattcagggtcttcctgtacatagcagagatatcttcgtcaaa
tcagaagaaggaccacctagttcaggaatctctgtcaaatcagagagagaaccagctagt
tttgcacagaatacagtccaggacaacatcagtgatggtgcagtttcagaagattctgtc
attgttatttctgatgatgatgaagatgacatggaggaccacaggagacagtctggagag
gagaaacaggatctacatgtacaagagaacagagtcaacctccttcatttgaccctgcct
aacatgcagcctaaagtggtcctgaggaaactctcacctcgcacaattgaagctcacatg
tctggtagaagagccttcttcccacaagaacaatcgaggacaaactgggaagcctccgca
tctgacagtgaggaggacagcttccctgtgtctacaggaaggcaggggaaaaaacagacc
tttagtagcagtggtgaggacctgtcagacattgactctgttcccttgtctgccctagtc
aaaatgtcttcctcaaaggtagatggtgacgtcatcagtatctcagactcatctgaagaa
ccatcctctgtagacaacgcaccacacaagatgagttccacaggaaacaggtggaaacag
aaggttcttaagaagaggagaagaagtgtggttctgtctaacagcagtgatgaggatgag
gatgttagacaagattgtgttcagccgatgacttcagaaaaggctgcgaaggtggaaaag
gatccgcttgccagcccagggatgcagcggaagatcaagaggaaagttagcagactattt
ggtgactccagctcagaatcagacaatgaaatagatcaagggtcaatcaatgagcactgc
agaaaaaacatctctaactcttttacttcaaatgtaattgaagaggagaagagtagagac
agtatgtcgtcagaattctcaaatgaagacccaaagcaaagtcagttgtccacgtgtaga
gaaatgacctcacctggtccatcatccagaattctcagcaaactgtcgctaaaagctgga
cgggtagatgaccaaagtagtggccagaatagccaaacaagtcaatgtaagaacgaccat
gaaagtgtaagtgatgcccacacaagcaaggggagtttgacaccaaagatggagattgta
agaattgccagtgcctcagttcatgttgatgaaagcaaagatgctgtaaccacccaacca
tcagacacaagtaacagtcgtgccttcatagcatcagattcagaggactcaaccattgtt
ccagcaggcaaagcagcaacaacacagagcaaactgcagaactcccctctaaagataaat
tcctctgtggcaagcaaaatcagatgccagcttttgaaaaaccagcacaaatctacagac
actacgcaaagtaaagtacagagtagcgatgtagagaagggacaacattcatcatcagga
gaatcaaagaagagagagctaacggatatggagcttcttgcagctgacaacaagaactct
ggcacagattctcaggaagacacactggccacatttctcatagacgacaacgctgaagat
cactcgtacctaatggagagtagtgaccaagcctggctcgacagcgagtcagagaaagac
gaaagaacaaagtgtttcatcacaaagaaattctacaagtcatgcagaagagatgctgca
tcaaccacacaagacacctctacttgtgcctccctgaagaggaaagatagtcatcatgat
aacatattctcatcttctattgctcctgaaagaaaagcaggttctacagttgaacaaaac
acaaagaagaagaggaagataagacacaaggattttgaagacaattctacagttagaagt
aaagatttcaataaacctagaggcagagacgcagcacattctcttgctgatacttggcac
agagaggatgcatggggaggaacaaacgatgcagagaatggcgacaccatagattatgac
gagcctgtttactttgactttgacctggacgaggttccagaggaggaacaggaacatttc
ctggcacagaagtttgcctcgtcacaggagacgccaaagaagaaaacagcgcggaagaaa
aaggttcagcacgtgcaggcatcgaagaaactggcaaaaggaaaaggagggaaaagggta
aagactgccgccaggcttcgtctgacgtctcgcagcaccatgctgacagaaaccatgatt
cagaccagacgaccacacagcaagtccagtacagaaccagctcaaaccagtactagccag
tccagctctcttgaaaccagtgccaaccagtcagctaggagcagtaccgaccagccacaa
ctggatcaaactgatgccaacctttcggaacctcctgaaggtcaacctgaaagtgccttg
ggtgttcccattagtgcacagatctccaccactgctccatctaattcgtacaaacagaaa
ccagctgcagtgaaacccacaataaaggagctgcccccacctaaagtccagcccagcaga
ccagtcaaccctgactacttcttaacatgcctcctgcagtggaaccctcagtggatggag
gaaacaaccagaccagtgttgcccttcccttgccatggcctacagccagttcctcagatg
tttgggtcatttgacgactacctgaaaaccttcacacctctcctgttactggaaacatgg
gaaatgatctgtaaagagagggagagtgcaaactccaaaggacctgctgcccagatgaaa
gttactgtggggacttgtttcgaggcacggtgtcttcaactcatgcacacccataccctg
gtgaaaaaacaaacctccactcctgctgagggagacctgttggtgctgagtgctgacagg
agaagggaccaggaacaggacagtcccacacatgtacaggcattcggtgtggtggagaag
gttatcaaacagccaaatataggaggaagtagtgattactggaagctcactgtgtgcatc
aaagtcaacccaacaaccttccctgtcacagagggacagactgttaacatccaggtggtg
acatctctggtggtgagtcagcgtcagtggagtggtctgatcttccttcatcgctccctg
ctcgctagggacatcctacgtcctcggggaccctctgtcttctctatccaaactgacttc
tcccagagagcacacgtggtagggcggtacaaccccatgcagagggcagccatcgcaggc
gctgcccatgctgccctgcagcccttccccctgcccaggatatgtctgctgcagggtccg
cctgggacaggcaagtctcacaccatcgtggggctggtcaggaaaatcatccaggctggc
aacccccctccagatggcaacccccctgtcccaccggagaacaagccccgtgtgctgctg
tgtgccccctccaacgctggcattgatgagctggtacggcgcatgatccgagaggttcga
cagggagaggaggagaaggaaaacaccaagaggttttacacagggaactgtggggacttg
aacctggtgcgtctgggtcggccagcctccattcatcctgatgtacagggcttcagtctg
gacaacatcgtggagaaacaactcaaatccttcaccaaagaagtagagaccagcaaggag
cgtcacatcgtggtgcagctgacagcgctggatgtgaagatagcagacctggagcgggag
tgtggcatgcagcgactcatggggaacacacacaagcagagagaggtggagaggaagaga
gacacactgcaggcacagagggacaaactggacaagacaaacagacaggtccagctgaag
aaggatgagtaccagcgggagggtacacggatcagacagagggttctgatggaggctgac
gttgtgtgctgtactctcagcaccagcggctccaacatgctggaacaggccattagcaag
gcaggggtggccaggagtatccacttcacctgtgccatcattgatgaggctggacagtgt
aatgagctggatgccctgattcccctgcagtacggcatgtctaaactcattctggtggga
gaccctgaacaactgcccgcaactgtactgtcaaagaaagcccaggacttgaacttccgt
cagtccctgtttgagaggctgtaccgagtcttcaaaccccggccagacaacccggtcctc
atgctggacacacagtacaggatgcaccctgctatctgtgccttcccctcacacaacttc
tactgtgggaggttgagaactgacaagtaa
DBGET
integrated database retrieval system
