Branchiostoma belcheri (Belcher's lancelet): 109477238
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Entry
109477238 CDS
T07532
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03018
RNA degradation
bbel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109477238
09123 Folding, sorting and degradation
03018 RNA degradation
109477238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbel03019
]
109477238
03041 Spliceosome [BR:
bbel03041
]
109477238
Messenger RNA biogenesis [BR:
bbel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109477238
mRNA degradation factors
5'-3' decay
Lsm complex
109477238
Spliceosome [BR:
bbel03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109477238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin6
DUF150_C
Motif
Other DBs
NCBI-GeneID:
109477238
NCBI-ProteinID:
XP_019633877
UniProt:
A0A6P4ZSF0
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MANALEDYVNKTVSVITADGRMIVGTLKGFDQTTNLILDESHERVFSSGQGVEQVVLGLY
IIRGDNIAVVGEIDDDIDTRLDMVNIKAEPLNPVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgctctagaggactacgtcaacaaaactgtttcagtcatcactgcagatggt
cgaatgatagtggggacactgaaagggtttgaccagacgacaaacctcatcttagacgag
agccatgaacgagtcttcagctctgggcagggtgtggagcaggtggttctgggactgtac
attatcaggggggacaacatagctgtggtaggagaaatagacgatgacattgacaccaga
ttagacatggtaaacatcaaggcagaaccactcaaccctgtggtgcactga
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integrated database retrieval system
