Branchiostoma belcheri (Belcher's lancelet): 109478530
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Entry
109478530 CDS
T07532
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109478530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbel03041
]
109478530
03009 Ribosome biogenesis [BR:
bbel03009
]
109478530
Enzymes [BR:
bbel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109478530
Spliceosome [BR:
bbel03041
]
Complex A
U2 snRNP components
U2 related factors
109478530
Complex B
109478530
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
109478530
Ribosome biogenesis [BR:
bbel03009
]
Eukaryotic type
90S particles
Helicases
109478530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
AAA_22
DEAD
AAA_19
nSTAND3
SRP54
ABC_tran
PhoH
Flavi_DEAD
T2SSE
TsaE
AAA_16
NB-ARC
Motif
Other DBs
NCBI-GeneID:
109478530
NCBI-ProteinID:
XP_019635701
UniProt:
A0A6P5A1P8
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MSKRHRLDVGDSHSKRHRDSGYSNSSSGSKSSNSVISMPKPNTVPTINPFTGMPYTARFH
DILKKRMLLPVVEYKDKFMEMMRGQQIIVLVGETGSGKTTQVPQWCLEYVRAYNPKRGVS
CTQPRRVAAMSVAQRVADEMDVILGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMADP
LLERYGVILLDEAHERTLATDILMGLLKEVVRQRGDLKIVVMSATLDAGKFQGYFDNAPL
MSVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEETEGDILLFLTGQEEIEEACKRM
KREVDNLGPEVGEMKVIPLYSTLPPNLQQRIFESAPPNKPNGAIGRKVVVSTNIAETSLT
IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAAQRAGRAGRTRPGKCFRLYTEKA
YKQEMQDQTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL
DDDGELTELGSMMAEFPLDPQLAKMVIASCDHNCSNEILSVTAMLSVPQCFVRPNEAKKA
ADEAKMRFAHIDGDHLTLLNVYHAFKQNHEDTQWCYDNFINFRSLKSADNVRQQLVRIME
RFNLRRTSTEFTSRDYYINIRKALVSGFFMQIAHLERTGHYLTVKDNQVVQLHPSTCLDH
KPEWVLYNEFVLTTKNYIRTVTDIKPEWLIKIAPQYYDMQNFPMCEARRQLERIIAKVQA
YENAF
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagacacagactagatgtgggagactcccacagtaaaaggcacagagactca
ggatacagcaacagttcgagtggaagcaagagttccaactctgtgatcagcatgcccaaa
ccaaacaccgtccccaccatcaaccccttcacaggcatgccctacacggcacgcttccac
gacatcctgaagaaacgcatgctgctgcccgtggtggagtacaaggacaagttcatggag
atgatgagaggacagcagatcatcgtactggtgggagagactgggtctgggaaaacaaca
caggttccccagtggtgcttggagtacgtccgtgcatacaacccaaagcgaggcgtgtcc
tgtacccagccgcgtcgagtggcggccatgtcagtggcgcagcgtgtggcggatgaaatg
gacgtgatcctgggacaggaggtcggctactccatcaggttcgaggactgctccagtgcg
aagacaatcctcaagtacatgacagacggtatgctgctgcgtgaggccatggcggacccg
ttgttggagcgttacggggtgatcctgctggacgaggctcatgaacgtacgctggcgaca
gacatcctgatgggactgctgaaggaggtggtgagacagaggggagacctgaagattgtg
gtcatgagtgcaactttagatgcaggcaagttccagggttattttgacaatgctccgctc
atgagtgtccctggccggacacatcctgtggagattttctacacccctgagcctgagaga
gactacctggaggcagccatacgaactgttatacagatccacatgtgtgaggaaacagaa
ggagacatactactgttcctcacaggtcaagaggaaattgaagaggcgtgtaaacgtatg
aaacgagaagtggataaccttggcccggaggttggtgagatgaaggtcatccctctctac
tccaccctcccacccaacctgcagcagcgaatcttcgagtctgccccacccaacaaacct
aacggggccatcggacggaaggtcgtggtgtctactaacattgcagagacgtccctcacc
attgacggtgtggtgttcgtgatcgacccaggcttcgccaaacagaaggtgtataacccc
cgtatccgggtggagtcattgctggtaacagccatcagtaaggcgagtgcagctcagcgt
gccggccgcgccggtcgtacgagaccagggaagtgtttccgactgtacacggagaaggcg
tacaaacaggagatgcaggaccagacgtaccccgagatcctcaggtccaacctcggttct
gtcgtgctgcagctcaagaagctgggcatcgacgacctggtacactttgacttcatggat
ccccctgccccagagaccctgatgagagcgttggaactcctgaactatctggcagcgctg
gacgatgacggagagctgaccgagctgggctccatgatggccgagttcccgctggaccct
cagctcgccaagatggtcatcgcgtcgtgtgaccacaactgttcaaacgagatcctgtct
gtcacagccatgctatcagtcccacagtgttttgtgcggcccaacgaggcaaagaaagcc
gcggacgaggccaagatgaggttcgctcacatcgacggagaccacctgactctgctcaac
gtctaccatgccttcaagcagaaccatgaagacacccagtggtgctacgacaacttcatc
aacttccgctccctcaagtctgcggacaacgtacgccagcagctggtccgcatcatggaa
cgcttcaacctgcggcgtaccagcacggagttcacatctcgcgactactacatcaacatc
cgcaaggccctggtgtcaggcttcttcatgcagattgcccacctggagagaaccggtcac
tacctgacagtgaaggacaaccaggtggtgcagctgcacccgtccacctgtctggaccac
aagccggagtgggtgctgtacaacgagtttgtactgaccactaagaactacatcaggaca
gtcacggacatcaagccagagtggttgataaagatcgcaccacagtactatgacatgcag
aacttccccatgtgtgaggccaggcgtcagctggagagaatcatcgccaaagttcaggcc
tacgagaacgccttctag
DBGET
integrated database retrieval system
