Branchiostoma belcheri (Belcher's lancelet): 109478592
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Entry
109478592 CDS
T07532
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03440
Homologous recombination
bbel03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109478592
03450 Non-homologous end-joining
109478592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbel03032
]
109478592
03400 DNA repair and recombination proteins [BR:
bbel03400
]
109478592
DNA replication proteins [BR:
bbel03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
109478592
DNA repair and recombination proteins [BR:
bbel03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
109478592
BRCA1-C complex
109478592
NHEJ (non-homologous end-joining)
MRX complex
109478592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_15
Rad50_zn_hook
SbcC_Walker_B
AAA_21
SMC_N
GAS
Rootletin
AAA_29
GTP_EFTU
ABC_tran
AAA_13
Motif
Other DBs
NCBI-GeneID:
109478592
NCBI-ProteinID:
XP_019635818
UniProt:
A0A6P4ZGF7
LinkDB
All DBs
Position
Unknown
AA seq
1309 aa
AA seq
DB search
MSSLVKMSIQGIRSFGPDDKDKQVIKFFNPLTIIQGHNGAGKTTIIECLKYMTTGDFPPG
CARGGSFVHDPKIAHETEVKGQIRLQFRDVNGQLVSVQKSMMATQKVKKVDFKTMEGVIT
RDKHGQRVSLSSRCAEIEREMISLLGVSKAVLTNVIFCHQEDSNWPLSEGKTLKTKFDEI
FSATRYIKALEAIRKLKLDQGHTIKEHQAEIKYLKQNKEKAAEIKEQQSQTEGRLAASKE
SIRQIRQELQPVEERIDKINAKANEIHQLEKRLSSLQSRKTQMERDMQDLRDNLDNVFTG
STEQLKRQLSEHLGQVEENEDAVRQLEMRIDQVTRECQRYGRERGDHLVTQGKLQQEAAL
HEQNLQDRDKLVLTLAQQLGLEGFSTAPFNDRRIARFHECMKQRIDEAVAMATSVKQDHE
ELEAVAQKKVDDLRDTKTKLEQTQRLKQDMLNKNKQERREIERELSKVDASTERIASLAA
DLARKERELQQVEESAHIPQLKEEVLQLQNEKRQLDGQLGQLDAELHQMHLQSSVRTQLE
MLRKDKVAKEDSIRKLKQRHQSELTDLMGHFPSKTELVEWLSQKQQEISQNQRRTQKVHQ
EVSSLEARKKMLTEQLKKREQELDKYEEQLFDVCGSQDFDVEMDELGDHIQKLQDQKGAL
VGTRHLYTRFISELQKEPSCPLCERRFGDDQEVKELVDFIKQKIARVPTELNTKDQLLRQ
QQQKYDTMMSLKPIRKQVVDLKDHEVPDIKSKISTINQEIEQKRTQITEGDELFATLSME
EEMAKACKDDIAMIERYRTELRELERKIAQQSSKLAGSDSGRTIEEVNSAKQDKQLQVDN
TAAKLEQKRQQISDLSEKINALKMEVNTIAGEKLRLESELQRMKQLEDQKAELVSAYQEL
QREIKDTQEKLEPLESRLQGLRREKDDITRKKEQAVERAKCKVDQERSRKNEVASLDTEI
NRYVEQGRDKLLQETEEKLQVLENKVKKAEEEKEKMDTRMQTLRKEVANQKARERELQDN
LQLRKKEDEVNKIAAEIADQEEELGGLDARSIEQEKRKLVEKQDQLLKEKYVAEGRMRGL
EEEIRRFRKDLQSEQFKDADVKYRDMMIVLKTMELANSDLEKYYKALDRAVMSYHHMKME
EINKIIQELWRNTYRGQDIDTIEIRSAEDTTTAATKNMRRTYNYRVVMIKGETALDMRGR
CSAGQKVLASLIIRLALAETFCINCGVLALDEPTTNLDRENIESLAAALMDIVKGRSRQR
NFQLLVITHDEEFVDLLVHANFTQHFWRVSKDYDGLSQLVKHDAAVLQD
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccctggtgaagatgagtatccagggcatccggagcttcggcccagatgacaag
gataaacaggtgatcaaattcttcaaccccctgaccatcatccagggtcataatggagcg
ggtaaaaccaccatcattgaatgtctgaagtacatgacgacaggagacttccctcctggc
tgtgccaggggtgggtcctttgtacatgacccaaagattgcccatgagacagaggttaag
ggtcagatccgtctacagttcagggatgtgaatggtcagctggtcagtgtacagaagtcc
atgatggccacacagaaagtcaagaaggtggacttcaaaaccatggagggtgtcatcacc
agggacaaacatggccagagggtgtccctcagctccagatgtgctgagatagagagagag
atgatctcactactgggtgtgtccaaagcagtcctgactaacgttatcttctgtcaccaa
gaagactccaactggccgctctcagaagggaaaactctgaagaccaagtttgatgagatt
ttttcagcaacaaggtacatcaaggctctggaggccatcaggaagttaaaacttgatcaa
ggccataccatcaaggagcatcaggctgagatcaagtacctgaagcagaacaaggaaaaa
gcagctgaaataaaagagcagcagtcgcagacagaaggtcggctggcggcaagtaaggag
tccatccggcagatcaggcaggaactgcagccagtggaggagcggatcgacaagatcaat
gccaaggcgaatgagatccaccagctggagaaacgactcagcagcttacagagcaggaag
acacagatggagagagacatgcaggatctcagggacaacctggacaatgtcttcacaggt
tctacggagcagctgaagagacagctgagtgagcacctggggcaggtggaggagaacgag
gatgctgtacgccagctggagatgaggatcgaccaggtcaccagggagtgtcaaaggtat
ggccgtgagagaggggaccacctggtgacccagggtaaactgcagcaggaggcggcgctg
catgaacagaacctgcaggacagagacaagctggtcctgacactggctcagcagctggga
ctggaggggttcagtactgcacccttcaacgacagacggatcgcacgcttccacgagtgc
atgaagcagaggatcgacgaggctgttgccatggcgaccagcgtgaagcaggatcacgag
gaactggaggccgtggcgcagaagaaggtcgatgacctgagggacacaaagacgaagctg
gagcagactcagcgcctgaaacaggacatgctgaacaagaacaaacaggagaggagggag
atcgagagggaactcagtaaggtggatgcctccacagagcggatagccagcctggcagct
gacctggccaggaaggagcgagagctgcagcaggtggaggagtcggcccacattccacag
ctgaaggaggaggtgctgcagctgcagaatgagaagaggcagctggatggtcagctgggg
cagctggatgcggagctgcatcagatgcacctgcagtcgtctgtacgcacgcagctggag
atgctgcgcaaggacaaggtggccaaggaggacagcatccgcaaactcaagcagagacac
cagtctgaactcaccgacctcatgggtcatttccccagtaagacagagctggtggagtgg
ctgagtcagaaacagcaggagatctcccagaaccagcgccgcacacagaaggtccaccag
gaggtatcctcactcgaggccaggaagaaaatgctgacagaacaactcaagaagagggag
caggagttggacaagtatgaggagcagctgtttgatgtgtgtgggagtcaggactttgat
gtggagatggatgagctaggagaccacatacagaaactacaggaccagaagggggcgctg
gtgggcacgcggcacctgtacaccaggttcatcagtgagttgcagaaggagccgagctgt
ccgctgtgtgagcgccgctttggggacgaccaggaggttaaagagctagtcgacttcatc
aagcaaaagattgccagggttccgacagagctaaacacaaaggaccagcttctccgtcag
cagcagcagaagtacgacaccatgatgtcactcaagccaatcaggaagcaggtcgtcgac
ctgaaggaccacgaggttcctgacattaagagcaagatttctactatcaaccaggagata
gaacaaaagcgtacccagatcacagagggggatgaactgtttgccacgttgtctatggag
gaggagatggccaaggcctgtaaggacgacatcgccatgatcgagcgctatcgcacagaa
ctccgcgaacttgaaaggaaaattgcccagcagtcatccaaactggcagggtctgacagc
ggacgtacgatcgaggaagtgaacagtgccaaacaggacaagcagctgcaggtggacaac
acggcggccaaactggagcagaaacgtcagcagatcagcgacctgtcggagaagatcaac
gcgctgaagatggaggtgaacacgatcgcgggggagaagctgcggctggagagtgagctg
cagaggatgaaacagctggaggaccagaaggccgagctggtgtctgcgtaccaggaacta
cagagggagattaaggacacccaagagaagctggagcctctggagtcccgactgcaaggt
cttcggcgcgagaaagacgacatcaccaggaagaaagagcaggccgtggaacgtgccaag
tgtaaggtggaccaggagaggagtcgcaagaacgaggtggccagtctggacacagagatt
aatcggtatgttgaacaggggagagacaagctgctgcaagagacagaggagaaactgcag
gttctggagaacaaagtgaagaaggcagaggaggagaaagagaaaatggataccaggatg
caaaccttgagaaaggaggtggccaatcagaaggctcgagaaagagagctgcaagacaac
ctacagctgaggaagaaggaagatgaagttaacaagatagcagctgagatcgcagaccag
gaggaggagttgggaggtctggatgcccgcagcatcgagcaggagaaacggaagctggtg
gagaaacaggaccagctgctgaaggagaaatatgtggccgaggggaggatgagagggctg
gaggaggagatacgcaggtttcgcaaggatctgcagtccgaacagtttaaagatgcagat
gtgaagtacagggacatgatgatcgtgctaaagacaatggagctggctaactctgacctg
gaaaaatactacaaggctctggacagggcagttatgagctaccatcacatgaagatggaa
gaaatcaacaagatcatccaggagctctggcgaaacacgtaccgtggacaggacatcgac
accatcgagatacggtctgccgaggacaccaccacggctgccaccaagaacatgcggcgc
acgtacaactacagagtggtgatgatcaagggagagacagctctggacatgaggggaagg
tgcagtgcagggcaaaaggtgctggcatccctgataatccggctggccctggctgagacc
ttctgtatcaactgtggagtcctggccttggacgaacccaccactaaccttgaccgggaa
aacattgagagtctggcagctgccctcatggatatcgtcaagggtcgctccaggcagaga
aacttccagctcctagtgattacccacgacgaagagtttgttgaccttctagtccatgcc
aacttcacccagcacttctggagggtgtccaaggattacgatgggctgtcacagttggtc
aaacatgatgcagcagtcctgcaggactag
DBGET
integrated database retrieval system
