Branchiostoma belcheri (Belcher's lancelet): 109478674
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Entry
109478674 CDS
T07532
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109478674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbel03041
]
109478674
Enzymes [BR:
bbel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109478674
Spliceosome [BR:
bbel03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
109478674
Complex B
109478674
Complex C
U2 SnRNP specific factors
109478674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P-loop_SecA
ERCC3_RAD25_C
ResIII
Motif
Other DBs
NCBI-GeneID:
109478674
NCBI-ProteinID:
XP_019635898
UniProt:
A0A6P4ZGN1
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MNWHKGGGGQKRGFGFGGFALGKKDDKGSAPNYGMVPPVGSGRGGVFTNMDITVGRKRHA
MSDEQSYFDDDDDDEGNVPAVSPGRKPADSDEDSEEDPLDSFMAQVETAAQRDLENMGKK
DEKKTKEERFDIDEMDDQESYFKYMEENPLAGVNPDDDDPIVEYDEDGNPIVPEKSKIID
PLPPIDHSEIDYPNFERNFYEEHGDISKLSPAEVNELRRKLDIRISGAAPPKLVTSFAHF
GFDEQLMHQIRKSEYSQPTPIQAQGIPVALSGRDIIGIAKTGSGKTAAFVWPMLVHIMDQ
KELEAGDGPIGLICAPTRELSQQVRGSMWEQTKALQLGAEIVVCTPGRLIDLVKKKATNL
QRVTYLVFDEADRMFDMGFEPQVRSIANHVRPDRQTLLFSATFKKRIERLCRDILMDPIK
VVQGDLGEANEDVQQIVEIFPAGPPKWQWLTRRLVEFTSVGSVLIFVTKKANSEELASNL
KAQDFEAGLLHGDMDQSERNKVISEFKKKTIPVLVATDVAARGLDIPSIKTVVNYDVARD
IDTHTHRIGRTGRAGEKGVAYTLITTKDVHFAPHLVRNLEGANQRVPEELMNLAMQNNWF
RKNRFKGGRGKKITGFQKRERPGLGADLSGGGSKNDDYGDDEDGNMSAPMTYSTFGGDNA
YSAGASRTAAGPQSDRLSALKSAFMTQYKKKFQVASDSARPTFKGGSSLSTVSGRGGFTS
GGSLHTVDSPGTGLTQYQKKFRPASDSAKPTFKGGSSLSTVSGRGGFTSGGSLHTVDMAT
NPQTASPGSVISQYQRNFQSASDSSKPSFKSGSSLSTVGTSGGFGGGQSSPSSGKASGGL
GGFQSGSSLSTVKSPGGMAGFQSGSSLSTVGSSGGFQSAGSLHTISSPTGSSGAADKFTN
FAIPKDPVTSPSALSRAHNSSGSRFSSSSSSSSSSHRDRDRDRDRDRDRHRDHHDHDRSR
DRDRDRDRDRDRHRDRDRDRDHDRHRHDKERDRDRDSDGFKAPGPVSSPPSSKQPKSKRS
RWDT
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgaactggcataaaggaggagggggccagaagcgagggtttggcttcggtggctttgcc
ctgggaaaaaaggacgacaaaggcagcgcccccaactatggaatggttcctcccgtgggc
agtggaagagggggagtgttcactaacatggacattactgtagggaggaagagacacgcc
atgagtgatgagcaaagttactttgacgatgatgatgatgatgaaggtaatgtcccagcg
gtcagtcctggacgtaaacctgcggacagtgatgaggacagtgaagaggatccactggac
tccttcatggcacaggtggaaactgcagcacaaagagacttagagaacatgggcaagaaa
gatgaaaagaagacaaaagaagagagatttgacattgatgaaatggatgaccaggagtca
tacttcaagtacatggaagagaaccctctagcaggggtgaatccagacgatgatgaccct
attgttgaatatgatgaggatggaaaccccattgttccagagaagtcgaaaatcatcgac
cccctgccccccatagaccactcagagattgattacccgaactttgaaaggaacttctac
gaagaacatggagatatctccaaactctcaccagcagaggtcaacgaactcagaagaaag
ctggacataaggatatcgggtgctgcccctcctaaactggtgaccagttttgcccacttt
ggttttgatgagcaactcatgcatcaaatcaggaagtcagaatactcccagcctacaccc
atccaggcacagggaattcccgtggctctaagtggccgagacatcatcggcattgcgaag
acgggcagcggaaaaacggctgcgtttgtgtggcccatgctggtgcatattatggaccag
aaggagttagaggcaggggatggacccattgggctgatctgtgcacctaccagggagctg
tcacagcaagtaagagggagtatgtgggaacagaccaaggctctacaactgggcgctgag
atcgtcgtctgcactccgggccgtctgatagaccttgtgaagaagaaggccactaacctg
cagagagtgacatacctggtgtttgatgaggctgacaggatgtttgacatgggatttgag
ccacaagtcaggtctatagccaatcatgtcagaccagacagacagaccctactgttcagt
gccacctttaagaagagaatagagaggctgtgcagagacattctcatggaccccatcaaa
gtggtgcagggcgatctgggagaggccaatgaggatgtacaacagatagttgagatcttc
ccagcaggtccacccaagtggcagtggctgactaggagactggtggagtttacttcagtt
ggcagtgttctcatctttgtgaccaaaaaagccaacagtgaagagctggcatccaacctc
aaggctcaggactttgaagctggtttgcttcacggtgacatggaccagagtgagagaaac
aaagtcatctcagagttcaagaagaaaaccatccctgtactggtagctacagatgtggca
gctcgtggtttggacattccctctatcaagactgtagtgaactacgacgtggctcgtgac
atcgacactcacacacacaggatcggcagaacaggccgtgcaggtgagaagggtgtggcg
tacaccttgataaccactaaggatgtgcactttgccccacatctggtgagaaacctggag
ggagccaaccagagagtacctgaggaactcatgaacttagccatgcagaataactggttc
aggaagaaccggttcaagggtggtcgaggcaagaagatcacgggttttcagaagagagag
agacctggacttggagcagacctgagtggtggaggcagtaagaatgacgactacggtgat
gacgaggacggaaacatgtcggccccgatgacctacagcacgttcggcggggacaacgcc
tactctgccggcgccagccgcacggccgccgggccacagagcgaccgactgtccgcactc
aagagtgccttcatgactcagtataagaaaaagttccaggtagccagtgactcggccagg
cccactttcaaaggtggcagcagcctgagcacagtatcaggcaggggagggttcaccagt
gggggcagtctgcacactgtggactcaccaggcactggacttacgcagtaccagaaaaag
ttccggccggccagtgactctgccaagcctaccttcaaaggtggcagcagcctgagcaca
gtatcaggcaggggagggttcaccagtgggggcagtctgcacactgtggacatggccacc
aacccacagacagcctcaccaggcagtgtcattagtcagtaccagagaaacttccaatct
gccagtgactccagcaaaccttccttcaaaagcggcagcagcctgagcacagtggggact
tcaggagggttcggtggtggacaaagtagccctagcagtgggaaggcatcaggaggattg
ggaggcttccaaagtggcagtagcctgtctacagtgaagtcacccggaggcatggcaggg
ttccagagtgggagcagtctgagtactgtcgggtcatcaggagggttccagagtgcaggg
agtctacacaccatcagcagtcctactggttctagtggagcagccgacaaatttacaaac
tttgccatacccaaggacccagtaaccagcccctcggcactgagcagagcacacaattcg
tccggcagcagattcagcagctcttctagcagcagcagcagctcacacagagatcgggac
agggatcgagatcgcgaccgtgaccgccacagggatcatcacgaccacgacaggagccgg
gacagggacagggatcgcgaccgagatcgggacagacaccgggacagagatcgggacaga
gatcacgaccgccacaggcacgataaagagcgggacagggatagggacagcgacggtttc
aaagcgcccggacccgtctcgtcaccaccaagttccaagcaaccaaaatcaaagagaagc
agatgggacacttaa
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integrated database retrieval system
