Branchiostoma belcheri (Belcher's lancelet): 109479045
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Entry
109479045 CDS
T07532
Name
(RefSeq) collagen alpha-4(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel04382
Cornified envelope formation
bbel04512
ECM-receptor interaction
bbel04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109479045
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109479045
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109479045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbel04147
]
109479045
00536 Glycosaminoglycan binding proteins [BR:
bbel00536
]
109479045
Exosome [BR:
bbel04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109479045
Glycosaminoglycan binding proteins [BR:
bbel00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109479045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C4
cEGF
Collagen
FXa_inhibition
hEGF
EGF_CA
EGF
EGF_MSP1_1
Plasmod_Pvs28
EGF_3
Motif
Other DBs
NCBI-GeneID:
109479045
NCBI-ProteinID:
XP_019636449
UniProt:
A0A6P4ZQU9
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MGPRSGLGGLLVSLLAVSCAVVSGDPCVPNPCDPDNGHCRQVGWDYRCVCRPGFRLMPDG
LSCFPDSLTGSNPCAPNPCDPTHGQCVQEAGNYRCICRRDYQLMSDGRTCAPLTLELSQP
VLAEEDHDHDHDHDRDHGHDPCSPNPCDPANGQCVEERGTYRCICRPGFQLMSDGRTCTP
VSPVVDGHDHGHDQGHDPCSPNPCDPANGQCVEEGDNYRCICRRGYRLESDGRTCAPEAL
VPSTPCSPNPCDPHYGRCVEDGRNYRCVCNPGFELMPDGRRCIGVGPVVDGHDGHDPCSP
NPCDPVNGQCVEEGDNYRCICRRGYLLESDGRTCTRVPVAPALINDPCSPSPCDQTNGLC
VDEGGYHRCICRPGFQLLSDGRTCVPIALSQPDPPRRGDQGEVDINNGNDCGDYSCCGSQ
CVGQPGPRGHPGSRGPQGFPGPEGVQGETGAPGLRGSPGDQGAKGTAGDPGPRGPQGVVG
PAGPAGPRGIQGDKGGKGTAGARGLTGEKGLRGSQGLPGMTGEPGLPGNAGPMGMPGLCG
PKGDPGLPGPPGTGTASEGPPGPSGPPGFPGPAGPRGPPGIPGDAVYGTKGEPGLPGAPG
VRGPPGGPGGPGGPGRDGIPGSPGPKGELGVPGFPGPAGSPGDRGDPGFPGPKGDSGTAV
GVPGPPGRPGPQGPLGPPGFSGPKGEFGPPGPPGAPGPQGSGFPGPPGPPGPEGSRGPPG
GPGFPGPKGEAGIGFPGPSGFPGPQGDRGPPGPSGSDGEGGYRTFNLMTRHSQTTMVPQC
LPGMTKMWEGYSLLHGEGNERAHGQDLGTAGSCVRAFAPMPFMFCDINFQCHYATRDDKT
YWLSTVSTRAEIPDSPVQGIDVLRFISRCVVCEVPSTVMAFHSQSSDIPDCPLPTRDHRW
ESLWEGFSFFMHTAAGEGSGQIFSSPGSCLERFRPAPFIECHGARGTCGFFANKFSFWLA
SVPRDYNPDQNRDPYEPRDGPCQEMIRTQTARTEMERMVGRCRVCMLITDQIEYSIREAG
PQIGAVPGYYPRQPLG
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgaggagcggccttggaggcctgctagtctctctccttgccgttagctgtgca
gttgtttccggggacccctgtgttccgaacccctgcgaccccgataacggccactgcaga
caggttggctgggactacagatgtgtgtgccggccaggattccggctcatgcccgacggc
ttgtcctgtttccccgactcccttactggcagtaatccatgtgctccaaacccctgcgac
ccaacccacggccagtgtgtccaggaggcgggtaactacagatgtatctgtaggcgggat
tatcagttgatgtcggacggtcggacatgtgctccactcactctcgagctatctcaacct
gttttagctgaagaggaccacgatcatgaccatgaccatgaccgtgaccatggtcacgac
ccctgttcgccaaacccctgtgacccagctaacggacagtgtgtagaagaacgagggacc
tacagatgtatctgtagaccggggtttcagttgatgtcggacggccggacgtgtacccca
gtctctcctgttgtggacggccatgaccatggccatgaccaaggacacgacccctgttct
ccaaacccctgtgacccagctaacggccagtgtgtagaagaaggagacaactacagatgt
atctgtagacgggggtatcgtctggagtcggacggtcggacgtgtgctccagaagccctt
gttcctagcaccccgtgttctccaaacccctgcgatccacattatggccgatgtgtcgaa
gacgggaggaactaccgctgcgtctgtaacccaggcttcgagttgatgccggacggccgg
aggtgcatcggggttggccctgttgtggacggccatgacggacacgacccctgttcacca
aacccatgtgacccagttaacggccagtgtgtagaagagggagacaactacagatgtatc
tgtagacgggggtatcttctggagtcggacggtcggacgtgtactcgagttccagtcgcc
cctgctcttatcaacgacccctgctctccaagcccctgtgaccaaactaacggtctatgt
gtggatgagggagggtaccacagatgtatctgtagaccgggctttcagctattgtcggac
ggccggacatgtgtccctatcgccctatcacagcctgaccctccccggagaggtgaccaa
ggggaggttgatatcaacaatggaaatgactgtggagattatagctgctgtggttcccaa
tgtgttggacagcctgggcccaggggtcatccggggtcacggggtcctcaagggttccct
ggaccagagggtgtgcaaggggaaactggagctccaggtttacgaggctctccaggggac
caaggagcaaagggaacagctggtgatcctggacccaggggaccacagggagttgtagga
cctgctggtcctgccggcccccgcggtatccagggagacaagggtggtaaaggaacggca
ggggcacgtggactgactggggagaaggggctgaggggttcacaaggcctccctggaatg
actggcgaacctgggttgccaggaaatgcaggccctatgggaatgccaggattatgtggt
ccaaaaggagatccagggttaccgggccctcctggaactggaactgcatctgaaggccca
ccaggcccatccggcccccctgggttccctggtcctgctggcccgaggggtcctcctggg
atccctggtgatgccgtctatgggactaagggagaaccaggtctgcctggggcacctggg
gtgagaggtcccccaggtggaccaggtggaccgggtggaccaggaagagatggaatacca
ggttccccaggacctaaaggtgaacttggagtcccaggatttccaggtccagcaggttca
ccaggagacaggggagacccgggatttccaggtccaaaaggtgattcaggcactgcagtt
ggtgtacctgggccacctggccgacctgggccacaaggaccgttaggacccccaggtttt
tctggaccaaaaggggaatttggcccaccaggaccacccggtgcacctggcccacaggga
agtggtttccctggccctcctggacccccaggacctgaaggttcccgagggcccccaggt
ggtccagggtttccaggcccaaagggagaggctggtatagggttcccaggaccatccggc
ttcccaggcccccagggagatcgaggaccaccaggaccatcaggatcagacggagaggga
ggataccgcaccttcaatctgatgacacgtcacagccagaccaccatggtgccgcagtgt
ctgccgggaatgacaaagatgtgggaggggtacagtctgcttcacggagaggggaacgag
agagctcatggacaggaccttggtactgccggctcctgtgtgagggcctttgctcccatg
cccttcatgttctgtgacatcaacttccaatgtcactatgccactcgtgacgacaagacc
tactggttatccactgtctcaacgcgggctgagatcccagacagcccggtgcagggcatt
gacgtcctccgttttatctcccgttgcgtggtgtgcgaggttccatctaccgtcatggcg
ttccacagtcagagctctgatattcccgactgtcccctccccacacgggaccataggtgg
gaatcactctgggaaggattcagcttcttcatgcacacggctgccggagaggggagtggt
cagatcttctccagcccaggcagctgtctggagaggttccgccccgcccccttcatcgag
tgtcacggagcccgggggacctgcggattcttcgccaacaagttcagcttctggctggcg
tctgttcccagagattacaaccctgaccagaaccgtgacccgtacgagccgcgggacggg
ccgtgtcaggagatgatccgcacacagacagcgaggacagagatggagaggatggtcggc
cgctgccgcgtctgtatgctgataaccgaccagatcgagtactctatcagagaggccggg
ccccagatcggtgccgtgccaggttactacccaagacagccgctaggctaa
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