Branchiostoma belcheri (Belcher's lancelet): 109479691
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Entry
109479691 CDS
T07532
Name
(RefSeq) exosome component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109479691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbel03019
]
109479691
Messenger RNA biogenesis [BR:
bbel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
109479691
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
109479691
NCBI-ProteinID:
XP_019637240
UniProt:
A0A6P4Z763
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MRIVTLRMNSFFPTKSKMADEVADEAEHVPTTPVGDVNSFVQRALSSVLRATKSSRTALP
SPGDDFDYYTSFAGFREFAAAHAHKIVNNMNTLLRHEGVEGEVLRGKKSVELDDRLDTVV
EANDIILERVGSLLDEASGVVKQKEPVLPAGTPQAGTLVSSWNKKSRSRSGSEKSVTWRL
LHARNIERPQLKFKDKIDNSNTPFIPIIRHKPNALRPLPKYDQQKRHPEDLDVPTALADF
IHRQREAQEGQPVDLTAHPYQYELEHFQPTPQQLQKTQPQTSNPIDTTPLTLVTSLEELM
EMNDKLSMCSEFAVDLEHHSYRSFQGFTCLMQVSTRDQDYIVDTLTLRADLHILNDTFTD
PKIVKVFHGADMDIQWLQRDFGVYVVNMFDTGQASHVLGLPRHSLAYLLKTYCDVEPDKK
YQLADWRIRPIPSEMIQYAREDTHYLLHIYDCMRSELLDRGNNEANLLHNTLERSRQVCL
QRYQKLLYTEDSYLNLLQKHKKTFNSQQLHAVRLLYRWRDTVARQEDESTGYILPNHMLL
VLAEALPKQTQGVFACCNPVPPLVRQHIEDVHRLLVQARDVPIVKTESTAVKRQDKTVQD
ERIADLYCPHDLSKLTAHPDVQILPTPVTVAVKKTPSMFGEGGGREKDLSQPPLPCIKPH
PDITLFDTVAKTQKGTASSDGKLSANQEKVARIMASFTSPFEKKLPFKLVQPGFHEFTPT
TKAKVKSKINTATSKQTKSSLGQSKDAETEVTQGTDNSVGLKRSATQVEEEAPVPLSEMG
AGPKKKKKKKKGKTSDTSDVQTQEECTPSVTVVPEDSQADNSAPTEQDTASKPKKKRKAQ
DISELDKDFQPFDYSKTDMSVFNLTEGKKKKKINKKQKNKKGKAGGN
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcgtcacgctgcgaatgaacagcttcttccctaccaagtccaagatggcagac
gaagttgcagacgaagccgagcacgtgccgacgactccagtcggtgacgtaaacagcttc
gtccagcgtgccctgagtagcgtcctccgtgcgaccaagtcttcccggacagccctgccc
agccctggcgatgacttcgattactacaccagctttgccggcttcagggagtttgcagcc
gcacatgcacacaagattgtcaacaacatgaacacactgttgcgtcacgagggggttgaa
ggtgaggtcctgcgtgggaagaaatccgtggagctggacgatcgactggacacggtggtg
gaggctaatgatatcattctggagagagtgggcagtctcctggatgaggcatcaggagtg
gtgaaacaaaaggagccagtcctacccgctggaacacctcaggcagggacactcgtgtca
tcatggaacaaaaagtccaggtccaggagcggtagtgagaagagcgtgacatggagactt
ctgcacgccaggaacatcgagcgtccacagctcaagttcaaggacaagatcgacaacagc
aacacgccattcatccccatcatacgccacaaacccaacgctctccgtccgctgcctaaa
tatgaccaacagaagcgccacccggaggatctggacgtccctacagccctggctgacttt
atccacagacagagggaggcacaggaggggcagcctgtcgacctgacggcacatccctac
cagtacgagttagaacacttccagcccactccgcagcagctacagaagacacaaccacag
acttcaaatcccatcgataccacgcccctgactctggtcacctcacttgaagagttgatg
gagatgaacgacaagttatccatgtgttcagagtttgcagtggacttagagcaccactcc
tacaggtcgttccagggtttcacctgtctgatgcaggtgtcgactcgtgaccaggactac
atcgtggacaccctcacgctgcgggccgacctccacatcctcaacgacactttcaccgac
cccaagattgtcaaggttttccatggagcagacatggatatccagtggttacagcgagac
tttggcgtgtacgtggtgaacatgttcgacacgggccaggcatcgcacgtcctcggactg
cccagacactcactggcgtacctactgaagacctactgcgacgtggaacctgacaagaag
taccagctagcagactggagaatcagacctattcccagtgagatgatccagtatgcccgt
gaagacacccactatctgctgcacatctatgactgtatgagatcagaactgttagacagg
ggaaacaacgaggctaacctcttacacaacacactggagaggagcagacaagtgtgtcta
cagaggtaccagaagttgctgtacacagaagattcctacctgaatctgcttcagaaacac
aagaaaaccttcaactcgcaacagctccatgcagtgagactgttgtatcggtggagagac
acagtggccagacaagaagatgaaagtacagggtacattctgcccaaccacatgttgtta
gtgttagcggaggcattacccaagcagacacagggtgtgtttgcctgctgtaaccctgtc
cccccgctggtcagacaacacatcgaggatgttcacagactcctcgtacaagccagggat
gtgccaatagtcaagactgaaagcactgctgtgaaaagacaggacaagacagtccaggat
gagcgcatagctgacctgtactgtccacatgacctgtctaaacttacagcacatcctgat
gtccagattctaccaactccagtgacagttgcagtaaagaagactccctccatgtttggt
gagggtggaggaagggaaaaggacctgtcacaacctcctctaccctgcatcaagccacat
cctgacatcacattgtttgatacagtagcaaaaacacagaaagggactgccagttctgat
ggaaaactttctgcaaatcaggaaaaggttgcaagaataatggcctccttcacaagcccg
tttgaaaagaaactgcccttcaaactggtgcagccagggttccatgagttcacaccaact
accaaggccaaggtgaagtcaaagataaacacagccacaagcaaacagaccaagtcttct
ctgggccagagtaaagatgctgagacagaggtcacacaaggtacagataactcagtgggt
ttaaagagatcagccacacaagttgaagaagaggcaccagtaccactgagtgaaatgggc
gcaggtccaaagaagaagaagaaaaagaagaaaggaaaaacatctgataccagtgatgta
caaacacaggaggaatgtactcctagcgtaactgttgttccagaagatagtcaagcagac
aacagtgcccccacggaacaagacacggccagcaagcccaaaaagaaaagaaaagctcag
gacatttcagaattggacaaagacttccagccatttgactacagcaagacagacatgtct
gtttttaaccttactgagggaaagaagaaaaagaagattaataagaaacagaagaacaag
aaaggcaaggcagggggaaactga
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