Branchiostoma belcheri (Belcher's lancelet): 109479915
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Entry
109479915 CDS
T07532
Name
(RefSeq) ubiquitin conjugation factor E4 B-like
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel04120
Ubiquitin mediated proteolysis
bbel04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109479915
04120 Ubiquitin mediated proteolysis
109479915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbel04121
]
109479915
Enzymes [BR:
bbel01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109479915
Ubiquitin system [BR:
bbel04121
]
Ubiquitin ligases (E3)
U-box type E3
109479915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
FXMRP1_C_core
Motif
Other DBs
NCBI-GeneID:
109479915
NCBI-ProteinID:
XP_019637534
UniProt:
A0A6P4ZTV5
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MSELSQDEMRRRRLARLAAGGLSTSPPQGSGTTPSPSSSTPTSPVQAASSQLTSPSQSPS
SQLTSPAQGAQSPLQSGFLTPGDRSPRTPSSPTTPVTPTGARPRQRAGASATLDYGSQSS
QSQSMDTDSEKGTLSQIDVDSGIENMEVEEVDRKDGAVSQREPSCSSELNEEQLLAIVCR
ILRVSWKKPEQDVVFLPGLAAEFKQDPKQVYNSLQDLVSQILVEVLTMPQAQSHNPFASL
TATPSQSLSSITSKKFGTSPFHGLPSPGTEGATASASSSSSTSDRFHIPACRETDILNYL
LECFDRVGMEERTAPKRCSQPPVCSLLNDLRTQCCTHAILVLRGAFTEPRAAGKQSYLVP
YLLCRNLPRGFLHELVMMACQDPEDFQGVIGVVLQDLQQTMSEFSMENDNYKYPLMALTE
LCELRKGTSSHRPVCNLIAQQTTWLPETLTQAGGREIQKLSFLGQFLSLSAFAEDDPKIA
ERFFAGPMLTQDSTRLINSSLQQALDFARGEMFKIIHSLLVNSETRDAMMTYLQAVIGRN
HKRAQMQADERMVAQDGFMLNIMTVLQQLSVKVKMDKVDTLYPHHPKSRIDLSEETRLRC
SSEEWKTWQEELNKEPSNWVEPKFPTECFFLTLHCHHLALLPACRNYMRRARAIRDLQRA
LEELQAQEPLWRNLPTANRHRETLKRWKAQQKKLTRSKACAEAVLHDESMLRRCLHFYGM
EVMLLFKILDPKNPRPTLPLAEDVPMAFATLPEFYVEDLADFLMFVLQHAPQVLEDPCSQ
DIVLFLLLMVATPKYMRNPYLTSKLIEVMFVANPAVQPRTERIHDMIVSHPLAAPYLAPA
LIRFYSDVETTGASSEFYDKFSIRYHISIILKTLWKIPAHQRTIIEESNTGKDFVRFVNM
LMNDTTFLLDESLDSLKRIHETQEAMKDVATWESQPRDMQESRRRQLNIDERQCRSYLTL
ATETVDMFHYLTVQIKEPFLRPELADRLAAMLNFNLQQLCGPKCKDLKVQNPEKFGFEPK
RLLGQLIDIYLHLDCEKFADAIANDERSYRKGVFEDACGVMMRAMIKTQSEIEHFANLAE
RVEKILVQKLKSEADFSDAPEEFKDPLMDTLMEDPVILPSGTVMDRAIITRHLLNSQTDP
FNRQSLREDELIPADELKQRIADWKREKMQ
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagctttctcaggatgagatgcgccggagacggctggcacgtttggctgcaggg
ggtctttccacatccccaccccagggctcgggcaccaccccctccccctccagtagcacc
cctacctccccagtccaggctgccagcagccagctcacttctccttcccagagtcccagc
agtcagctgacatctcctgcccagggtgctcagtccccgctgcagtctgggtttctcacg
ccgggagatcgctccccgcggacgcccagttctcccacaaccccggtcacgcctacgggc
gcacggccgagacagagggctggggctagcgctacattagactacggttctcagtcctct
cagagtcaaagcatggatactgatagtgaaaaagggaccctgtcccagatagatgtggac
tcaggtatagagaacatggaagtggaggaggtagatagaaaggatggggctgtgtcccaa
agggagcctagctgtagttcggagctgaatgaggagcagctgctagcgatcgtgtgtcgg
atcctgcgggtctcgtggaagaaaccagagcaggatgtcgtcttcctccctggtctggct
gctgagtttaaacaggacccgaaacaagtatacaacagtctccaggacctggtcagtcag
atcttagtggaggtgttgaccatgcctcaggcacaatcccacaatccctttgcgagcctg
acggccacaccctcccagtccctctccagcatcaccagtaagaagtttgggaccagtccc
ttccatggtttgcccagccctggtacagaaggtgcgacggcctcagccagctcctcctcc
tccaccagtgacaggttccacatccctgcctgcagggagacagacattctcaactatcta
ctcgagtgttttgacagggtcggcatggaggagaggactgctcctaagcggtgtagccag
ccgcccgtgtgttctcttctgaacgacctgcggacccagtgctgcactcacgccatcctg
gtgctacgaggggcgttcacggaaccgcgcgctgcggggaaacagtcgtacctggtcccg
tacctgctgtgtcgtaacctgccgcgggggttcctgcacgaactggtcatgatggcttgt
caggaccctgaagacttccagggggttattggggtcgtgctgcaagacttacaacagacc
atgtctgagttctctatggaaaacgacaattacaagtaccctctcatggccctgacagaa
ctgtgtgaactgcggaaggggacgtcctcccacagacctgtctgtaacctgattgcccag
cagaccacctggctccctgagaccctgacccaggccggggggagggagatacagaaactc
tccttcctcggacagttcctcagtctctctgcatttgctgaggatgatcctaagatagca
gagaggttctttgctggcccaatgctgacccaggacagtacccgactcatcaacagttca
ttacaacaagcactggactttgccaggggagaaatgtttaaaattatccacagtctgctg
gtgaacagtgagacgagagatgccatgatgacgtacctacaggcagtcatcggtcggaac
cacaagcgagcacagatgcaggcagatgaacggatggtcgcacaggacggcttcatgctc
aatatcatgactgtcctgcaacaactaagtgttaaggttaagatggacaaggtggatacc
ctgtaccctcaccatcccaagtcacgcatcgacctgtctgaggagacaagactgagatgt
tcatctgaggagtggaagacatggcaagaagaacttaataaggagccgtctaactgggtg
gagcccaagtttcccacagaatgtttcttcctgacgctccactgccaccacctggccctg
ctgcctgcctgccgtaactacatgcgcagggcacgcgccatcagagacctccagcgggcg
ctggaggaactgcaggctcaggagcccctgtggagaaacctgcccacagccaacagacac
agggagacgttaaagagatggaaagcacagcagaagaaactgaccagaagcaaggcgtgt
gcagaggcagtattgcatgatgagtccatgttacgccggtgcctgcacttctacgggatg
gaagtcatgctgctcttcaagattctcgaccccaagaaccccagacccaccctacccctg
gcagaagatgtccccatggcgtttgcgactctcccagaattctatgtggaggatctggct
gactttctcatgtttgtgctacaacatgctccccaggtcctggaggacccctgtagccag
gacattgtcctgttcctgctgctcatggtggccacgcccaagtacatgcgcaacccttac
ctcacctccaaactcatcgaggtgatgttcgtggccaaccccgccgtacagccgcgtacg
gaacgcatccacgacatgatcgtgtctcatccgctggctgcaccgtacctggcccccgca
ctgataaggttctactcagatgttgagacaacaggagccagtagtgagttctacgacaag
ttcagcatccgttaccacatcagtatcatcctcaagacactgtggaagatcccagctcac
cagagaactatcatagaggagagcaacaccgggaaggactttgtgcgttttgtgaacatg
ctaatgaacgacaccaccttcctgctggatgagagtctggactcgctgaagagaatccat
gagacacaggaggccatgaaggatgtggccacgtgggagtctcagccacgggatatgcag
gagagccgtcggcgtcagctgaacatagacgagcgtcagtgccggtcgtacctgactcta
gccacagagacagtggacatgttccactacctcactgtgcagatcaaagaacccttcctc
agacctgagctagcagacagactggcggccatgttgaacttcaacctgcagcagctgtgt
ggacccaagtgtaaggacctgaaggtacagaacccagagaagttcggcttcgagcccaag
agactgctgggacagctgatcgacatctacctgcacctggactgtgagaagtttgcagac
gccatagcaaatgatgagcgctcctacagaaaaggagtgtttgaggatgcctgtggggtg
atgatgagggccatgattaagacacagtctgagatcgagcacttcgccaacctggccgag
agggtggagaaaatcctggtgcagaaactcaagagtgaagcagacttcagtgatgcacca
gaggagttcaaagatccgttgatggacaccctgatggaggatcctgttatcctcccctcc
ggtacggtaatggaccgtgccatcatcacccgccacctgctgaactcacagacagacccc
ttcaacaggcagagtctcagggaggatgaactcattcctgcggatgaactgaaacaaagg
atagcagattggaagagggagaaaatgcagtga
DBGET
integrated database retrieval system
