Branchiostoma belcheri (Belcher's lancelet): 109480005
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Entry
109480005 CDS
T07532
Name
(RefSeq) calsyntenin-1-like isoform X1
KO
K22659
calsyntenin 1
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbel04515
]
109480005
Cell adhesion molecules [BR:
bbel04515
]
Cadherins
Cadherin related
109480005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
Glyco_hydro_16
Motif
Other DBs
NCBI-GeneID:
109480005
NCBI-ProteinID:
XP_019637672
UniProt:
A0A6P4Z8D2
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MIIRWSVLLLALLCGVLAEDVKSWEDDIEKVWTKGQDSSSEDDSDKYWRETKSSEEDALS
DDDWLRSQLEQQRRAQQASEVAAQRLTFDSLPKPLDMFPKQQGKSYNAEGNKHKPWLEIE
DGQIFHGLINENDMSMVELHPKLKASDKDSGDAGKICQFRITQQDVPFDAYVLNPNTGEG
YIRARKELNCEDKKEYTFTIQAYDCGIPEKGIQQKKSHKATVRIQVNDVNEHGPEFTASG
YEATVMEGKKYENILKVEAEDRDCSPGFSQICSYEIVTPNVPFQISEDGIISNTEPLQYV
DGHNYILTVTAYDCGQRRADLDVLVTITVKEQCHPGWKDFQKRIEYEPFSGTKALLPKVY
LETCGEEVSDITTTFTLETSHIGKGCDRDTYSSSSLLKLCGASQGSIDLLPAPGLGSEWT
QSLPTDEGHEGDQVFSFDGRQTGVQIPEGVVPKNLTNQFTIATWMKHRETFGGDKETILC
KSDKKELNRHHYSLYVHNCKLMFLLRHDGGDLETFRPAEFHWKIPQVCDKQWHHYAITVD
FPEVNLYVDGIPYSPFLVTDDWPLHPSKFDTRLTLGACWQGGDQEMSQFFRGELAGLLIH
PGKTETRRVISCLHNCNESLEFHSFDETGPGSEVHFNPDQTQLFLRGEFTPKNPDNEAYT
LDKYTKVLQKVAYQNGRQFPTPGMRALKIHTEVNCFDDETCIEVPDVDAYVMVLHPEEPT
INLSGTDHLARRVTELDQGVTPFRDLRIVSTIVRDVEEEEEEELQEGGATEVTPISHNLD
ACQITVDPPLESGKEELTVPKEDLARLRLEKSAATNGLVIKGVDTIANYEDILRKVVYRN
SKAGDYFDRVLKLKCSEMNGRYESNEYAVELKVLHTLNVANPESHVKVAAVAHNVPAQFV
QSKSVVHEAAVPRQVPQVVASSQSANVVTSLVIVICVGFLIFMIVLGVYRIRAANRRNMD
SEWDQAGEPRMEWDSSDLTITVNPMDVEYEGAESDSSDDDDDSAHDDSDSSDDDDEPPRE
VLGYEQELEWDSTAMVA
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgattataaggtggtcggtccttctactagcactgctgtgcggtgttctagcagaagat
gtgaagtcttgggaggatgatattgagaaggtttggaccaagggacaggactcctcgagc
gaagatgacagcgataagtactggagagagaccaagtccagcgaagaagatgcattgagt
gatgatgactggttgaggagccaactagaacaacagaggagggcacaacaggccagtgag
gtcgctgcacagcgcctaacgttcgacagccttcctaaacctttggacatgtttcctaaa
caacagggcaaatcttataatgctgaaggaaacaagcacaagccatggctggagatagaa
gatgggcagatcttccacggactcatcaatgagaacgacatgagcatggtggagctccac
cccaaactgaaggcttcagataaggactctggagacgctggtaagatctgccagttcagg
atcacgcagcaggacgttccctttgatgcgtacgtgttgaaccccaacaccggcgagggc
tacatccgcgcccgcaaagagctgaactgtgaggacaagaaggagtacacgttcaccatc
caggcctacgactgtggcatccctgagaagggcatccagcagaagaaatcccacaaggct
actgtccgcatccaggtgaacgatgtgaacgagcacggccctgagttcacggccagcggg
tacgaggcgaccgtgatggaggggaagaagtatgagaacatcctgaaggtggaggcggag
gaccgcgactgctcgcccggattcagccagatctgcagctacgagatcgtcacccccaac
gtgcccttccagatctctgaggatggcatcatcagcaacaccgagcccctgcagtacgtc
gacggccacaactacatcctgacggtcaccgcctacgactgcggccagaggcgcgccgac
ctggacgtcttggtcaccatcacggtcaaggagcagtgccaccctggctggaaggacttc
cagaagcgcatcgagtacgagcccttcagcggcaccaaggctctgctgcccaaggtgtac
ctggagacatgtggggaggaggtgtctgacatcaccaccaccttcaccctggagaccagc
cacatcgggaagggctgcgaccgcgacacctactcctccagctctctcctcaagctctgt
ggtgcctcccagggcagtattgacctgctgcctgcccccgggctggggagtgagtggacc
cagagcctgcctaccgacgagggtcacgagggagaccaggtcttctccttcgacgggcgc
cagaccggcgttcagatccccgagggcgtcgtccccaagaacctgaccaaccagttcacc
atcgccacctggatgaagcaccgtgagacctttggaggagacaaggaaaccatcctctgc
aagtctgacaagaaagaactgaaccgccaccactactccctgtatgtgcacaactgcaag
ctgatgttcctgctccgccacgatggaggtgatctggagaccttccgccctgctgagttc
cactggaaaatcccacaggtgtgtgacaagcagtggcatcactacgccatcactgtggac
ttcccagaagtgaacctgtacgttgacggcatcccgtacagccccttcctggtcaccgat
gactggccactccaccccagcaagtttgacacccgcctgacactcggcgcatgctggcag
ggtggtgaccaggagatgtcccagttcttccgtggcgagctggccggcttgctcatccac
cccggcaagacggagacacgacgtgtcatcagctgtctccacaactgcaatgagagtctg
gagttccactccttcgacgagaccggccccggttcagaggttcacttcaacccggatcag
acacagctgttcctgaggggtgagttcacccccaagaaccccgacaacgaggcgtacacg
ctggacaagtacaccaaggtgctgcagaaggtggcgtaccagaacggccgccagttcccc
actcccggcatgcgcgctctcaagatccacaccgaagtcaactgctttgatgacgagacg
tgtatcgaggttcctgacgtggacgcctacgtgatggtcctccacccggaggagcccacc
atcaacctgagcggcacggaccacctggcccgccgcgtcacggagctggaccagggcgtg
acccccttcagggacctgcgcatcgtgagcaccatcgtacgcgacgtggaggaggaggaa
gaagaggaacttcaggagggaggcgccactgaggtgacccccatcagccataacctggat
gcgtgccagatcacagtggacccaccactggagtctgggaaggaggagctcaccgtgccc
aaggaagacctggctcgcctgcgcctggagaagtctgctgctaccaacggtcttgtcatc
aagggtgttgataccatcgcaaactacgaggatatcctgcgcaaggttgtctaccgtaac
tccaaggctggggactactttgaccgcgtgctgaagctgaagtgctccgagatgaacggc
cgctatgagagcaacgagtacgccgtcgagctgaaggtcctccacaccctgaacgttgcc
aaccctgagagccatgtgaaggtggctgctgtggcccacaacgtgcccgcccagtttgtc
cagtccaagagtgttgtccacgaggcggccgtgccacgccaggtgccccaggtggtcgcc
agctcccagtctgccaacgttgtcacctccctggtgatcgtgatctgcgtgggcttcctc
atcttcatgatcgtgctgggcgtgtaccgcatccgcgccgccaaccgccgcaacatggac
tctgagtgggaccaggccggcgagccccgcatggagtgggactcctccgacctcaccatc
accgtcaaccctatggatgttgagtatgagggagcagagagcgactcctctgacgatgat
gatgacagtgcgcatgacgactccgacagctcagatgatgatgatgagcccccaagagag
gtgctgggctatgaacaggagctggagtgggacagcactgccatggtggcgtga
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