Branchiostoma belcheri (Belcher's lancelet): 109482884
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Entry
109482884 CDS
T07532
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03022
Basal transcription factors
bbel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109482884
09124 Replication and repair
03420 Nucleotide excision repair
109482884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbel03021
]
109482884
03400 DNA repair and recombination proteins [BR:
bbel03400
]
109482884
Transcription machinery [BR:
bbel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109482884
DNA repair and recombination proteins [BR:
bbel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109482884
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
SHOCT
Motif
Other DBs
NCBI-GeneID:
109482884
NCBI-ProteinID:
XP_019641320
UniProt:
A0A6P4ZJD1
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MSRSEDVLLMVSHVRHKKVEGTLFLMGERLAWSANSAGERLGVSHNYADIRSQKISPEGK
AKIQLQLVLHTGDTCNFHFNNPEGNSEQLKDRDGVKELLQQLLPRFKSQVNKELEEKNRL
LQEDPQLFQLYKDLVVSGVITAEEFWTNRAQTKQSNAAKGSQDIGVSASFLADIRPQSDG
CNGIKYNLTADIIASIFKTYPAVKKTHADNVPHNLSEKEFWTRFFQSHYFHRDRINHGKD
LFSDCAKNDEKDLHQIIQDKVKDSFLDLESLDETSLVKDEGYGNRSADTSTAPKHSVNQA
IIRRFNYHSTMVLEACRNKRSSEEDILSLGLGSSGDNSNSSCALSQSLGPPSKKARLRDA
ISYEDLGESTSSSAPPLSLTGADRYLQGPSAIQQGEYTTSQDIQRATQHVRQDMGGYRAD
LPNVLPSSLAASVTAELSPGGVLMQTGMQQSLKELIPKDLQDELQSLYAALAELLRHFWQ
CFPVTTPTLEEKVVRMKETLRRFQNTKMQPFQDKLRSQHLPTNLTDHLTEMISNAERKFT
TWSKKRSGRP
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgttcagaagacgtgttgttgatggtgagccacgtgcggcacaagaaagtcgaa
ggaacgctgttcctgatgggggaaaggcttgcgtggagcgcgaacagtgccggagagaga
cttggggtcagccacaactatgcagatatccgatcccagaaaatcagcccagagggaaag
gctaagatccagttacagctggttctgcacacaggcgacacgtgtaacttccactttaac
aaccctgaggggaactctgagcagctgaaggaccgggacggggtgaaggaactcctgcag
cagctgctgcccaggtttaaaagtcaggtcaacaaggaactggaggagaaaaacagactt
ctacaggaagacccacagttgttccaactgtacaaggatttggtggtcagtggagtcatc
actgctgaggagttctggaccaacagggcacagacaaaacagtcaaatgcagccaaaggg
agtcaggatattggagtatctgcatcattcttggctgacatccggcctcagagtgacggc
tgtaacggcatcaagtacaacctcacagctgacatcatagcctctatcttcaaaacatat
cctgcagtgaagaagacccatgctgacaacgtgccccacaacctgagtgagaaggagttc
tggaccaggttcttccagtcgcactacttccacagggacaggatcaaccacggcaaggac
ctgttctccgactgcgccaagaacgacgagaaagatttgcaccagatcatacaggacaag
gtcaaggactccttcttagacttggaatcattagatgaaacatctcttgtcaaagatgag
ggatatggcaataggtcagcagatacaagcactgcccccaaacactctgtgaaccaggct
atcatcaggaggtttaactaccacagtacaatggtgctggaggcatgtaggaataaaagg
tcatcagaagaagatatcttatcgttaggtttaggtagttcaggagacaatagtaactca
tcctgtgcactgtcacagtcactagggcctccatcaaaaaaggcaagactaagagatgca
atatcatatgaagacctgggggagtccacgtccagctccgcccctcccctgtccctgacg
ggggctgacaggtacctccagggaccgtccgctatacaacagggggagtacaccaccagt
caggacatccagcgggccacacagcacgtcagacaggacatggggggatacagggcagac
ttacccaatgttctacccagcagcctggctgcctctgtcacagctgagttgtcaccaggg
ggggtcctcatgcagactggcatgcagcagagtttgaaagagctgatacccaaggaccta
caggatgagttacagtcgctgtacgctgcgctggcggagctccttcgacacttctggcag
tgtttccctgtcaccacgcccacgctggaggagaaggtcgtcaggatgaaggagacgctc
aggagattccagaacaccaaaatgcagccgttccaggacaagctgagaagtcaacatcta
cccactaatctgacagaccacctgacagagatgatcagcaatgcagagagaaaattcacc
acgtggagtaaaaaacgcagtgggagaccctga
DBGET
integrated database retrieval system
