Branchiostoma belcheri (Belcher's lancelet): 109483291
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Entry
109483291 CDS
T07532
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109483291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbel03019
]
109483291
Enzymes [BR:
bbel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
109483291
Messenger RNA biogenesis [BR:
bbel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109483291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_1
RRM_Thc1
Motif
Other DBs
NCBI-GeneID:
109483291
NCBI-ProteinID:
XP_019641843
UniProt:
A0A6P4ZY72
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MEITRHNFKQVIDQVSEAVDEASFLCIDGEFTGLNNGPAVHGFDTPQERYDKLRKGSLDF
LFVQFGLCAFKYETEESRFVARPFNFYIFPRPLNRNAPDCRFLCQASSLHFLASQGMDFN
KVFRDGIPYLSPVDEQQMRDTLDQKHATQQLNSPPFTSGTAHTSDSTRTIQVPAEHKDFI
QQTLTRIQSFIDSDEDTIQLEPCNAYLRKLIYSTVKNKFSSSVYLETKVGEQNQHYFIEV
SKANEELLKKRGEEKRQQELDELDDAVGMSKIIRMICQSGKLVIGHNMLLDVLHLLHKFS
YPLPQEIDEFKSLVNCLFPRLLDTKLMASMHPFKELVSNTTLGDLEATLGKEPFKVPVIV
FPEDFPAYETAQEHQAGYDAYITGRCFTIMANYLGKFKSQSKPVLPGSALLEPFVNKLYL
MRVQDIPYINLTGEDLKPNRDHVFHVTFPKEWKSNDLYQLFRPFGPIYIAWIDDTSAFVA
MSKKDQSDLAYKMLCEGVSYRVRRYGEHKEPLAPHGRKRPLSFPEAITPRNGEGKRLKVT
SSDVGRRVSPVTQRCITTILEEAEDKPTTETGEEEEEEHLKEDGDEDKGDLKEEILAEKD
NDSTQAQLFEEPQVW
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggaaataaccagacacaactttaagcaggtgatagatcaggtgtcagaagcggtggat
gaagcttccttcctgtgtatcgatggagagttcacaggtttaaacaatggtccggctgta
catgggtttgacacacctcaagaacgatacgacaaacttaggaagggctccttggatttt
ctctttgtccagtttggactgtgtgctttcaaatatgagacagaagaatccaggtttgtg
gccagaccgttcaatttctacatcttccctcgaccgttgaaccgaaatgctccggactgt
cgatttttgtgccaggcctccagtttgcattttcttgcttctcagggcatggatttcaac
aaagttttcagggatggcatcccgtacttgtctcctgttgatgagcagcagatgagagac
accctggaccaaaaacacgccacgcagcagctgaactcccctccatttacgagtggtacg
gcccacacatcagactccaccagaaccatccaagtccccgctgaacacaaggacttcata
caacaaactctcaccagaatacagtccttcatagacagtgatgaggacaccattcagttg
gaaccctgcaatgcatatctgcgaaagctgatctactcaacagttaaaaacaagttttca
tcttcagtgtacctggaaaccaaagtaggagagcagaatcaacactacttcatagaagtc
agcaaagccaatgaggagttattgaaaaagagaggagaggaaaaaagacaacaggaactg
gatgaactggatgatgctgttgggatgtccaaaatcatcaggatgatttgtcagtcgggg
aaacttgtcattggtcacaacatgctgctggatgttctccaccttctgcataagttcagc
tacccactgcctcaggaaatagatgagttcaagtctctagtaaactgtctcttcccaaga
ttactggacactaaactgatggcaagcatgcatccttttaaggaacttgtctctaacaca
acactgggagacctcgaggcaactttagggaaagaaccattcaaagtgcctgtcatagtg
tttccagaagacttcccagcctatgagacagcccaggagcaccaggctggttatgatgct
tacatcactgggagatgtttcaccatcatggccaactacttaggtaagttcaagtcgcag
tctaaacctgtacttcccggatcagccttgttggaaccttttgtgaacaaactttacctg
atgagagtacaagacattccttacatcaatctgactggagaggacttaaaacccaacaga
gaccatgtcttccatgtgaccttccctaaggagtggaagtctaatgacctgtaccagctc
ttccgaccatttggaccaatctacattgcctggattgatgacacatcagcttttgtggct
atgagtaagaaggaccagtcagatctggcctacaaaatgctgtgtgagggagtgagctac
agagtaaggcggtatggtgagcacaaagagccactcgctccacatgggcggaagagaccc
ctgtcattcccagaggccattacacctcggaacggggaaggcaagaggttaaaggtcacc
agttcagatgtgggcagaagggtgtcgcctgtgacccaacgttgtatcaccaccatcctg
gaggaagccgaagacaaacccaccacagagacaggagaggaggaggaggaggaacatctc
aaggaagatggagatgaagataagggtgatctgaaggaggaaatcttggcagagaaagat
aatgattcaactcaggcacagctgtttgaggagcctcaggtctggtga
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