Branchiostoma belcheri (Belcher's lancelet): 109483645
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Entry
109483645 CDS
T07532
Name
(RefSeq) cleavage stimulation factor subunit 1-like
KO
K14406
cleavage stimulation factor subunit 1
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109483645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbel03019
]
109483645
Messenger RNA biogenesis [BR:
bbel03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109483645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
ANAPC4_WD40
CSTF1_dimer
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_RIG_1st
RMC1_N
Beta-prop_NOL10_N
Beta-prop_Nup120_160
VPS8_N
DUF7591
PROPPIN
Cytochrom_D1
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
109483645
NCBI-ProteinID:
XP_019642239
UniProt:
A0A6P5A7L3
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MKYRSGQLYYDGYESVAASLAKVVRLQGALTPSDRLLRLTKLALVTEEGTKQNSLTKERV
APGGGIDLEFESDVVTISPEAALYETCYVTSHKAQCRASAFTCDGQLIATGSVDASIKVL
DVDRMLAKSAQAPEQAAQETPQQNMENHPVIRTLYDHIEEVTCLDYHPQYPNVQLLASGS
KDYTVKFFDFTKPSVKRATKSIQEADVVRCLSFHPSGDFILVGTQHPTLRLYDSNTLQCF
VSCNPADQHKAAISAVKYSPNANLYVSCSKDGDIKVWDGVSNRCIATYTRAHDGEEVSSV
VFSRNSKYILSSGKDSLVKLWELSTGRALITYTGAGSSKQDHRTQAVFNHTEDFVFFPDE
KTTSLCCWDSRNAERQRLLSLGHNNVVRSIVHSPTGPAFVTCSDDYRARFWYRRANME
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaagtaccggtctggccagctgtactatgatggttatgagtcagtagctgccagtctg
gctaaggttgtacgactccagggtgccctgactccctctgatcgcctgctcagactcacc
aaactggcactggtcacggaagaaggtacaaagcagaactctttgacaaaggagagggtt
gcaccaggaggtggtattgacttggagtttgagtctgatgttgtgaccatttctcctgag
gctgccctgtacgaaacctgctatgtgacatcccacaaggctcagtgtagggcctctgcc
tttacttgtgatggccagctgatagctaccgggtctgtggatgcctccatcaaggtcctg
gatgttgacaggatgttggcaaagagtgcacaggcccctgaacaggcagctcaggaaacc
ccacagcagaacatggagaaccatcctgtcatacggaccctgtatgatcacattgaggag
gtgacttgtctggactaccatccacagtaccccaatgtccagctcctggcctctggcagt
aaggactacacagtcaagttctttgacttcaccaaaccgtcagtcaaaagggccaccaag
agtatacaggaggcagatgttgttcgatgcctgtctttccacccatcaggtgacttcatt
ctggtgggcacacagcaccccacattacgcctgtatgacagcaacaccctgcagtgtttt
gtatcctgtaaccctgcagaccaacataaggcagctatcagtgctgtaaagtacagcccc
aatgccaacctgtacgtcagctgcagtaaagatggggacatcaaggtgtgggatggtgtc
agtaaccgctgtattgccacatacacacgggctcatgatggagaggaggtgagctcagtg
gttttctccaggaattcaaagtacattttgtcgagtggtaaggactctctggtgaagttg
tgggagttgtctacaggccgtgctctcatcacctacactggagctgggtcttctaaacag
gaccaccgaacacaggctgtgttcaaccataccgaggacttcgtgttcttcccggatgag
aagaccaccagtctgtgttgttgggattccagaaatgctgagcgacagagactcctgtca
ctgggacataacaacgtggtacggtccattgtccattccccaaccggtcctgcctttgtg
acctgcagtgatgactacagagctcgcttctggtacagaagggcaaacatggagtaa
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