Branchiostoma belcheri (Belcher's lancelet): 109484017
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Entry
109484017 CDS
T07532
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109484017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbel03019
]
109484017
03036 Chromosome and associated proteins [BR:
bbel03036
]
109484017
Enzymes [BR:
bbel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109484017
Messenger RNA biogenesis [BR:
bbel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109484017
mRNA degradation factors
5'-3' decay
Decapping complex
109484017
Chromosome and associated proteins [BR:
bbel03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109484017
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
109484017
NCBI-ProteinID:
XP_019642737
UniProt:
A0A6P5A952
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MAATSMNSMSVANHAGPIKQMTKPVGMPSGAGLAANHGQTGDNKPSTGPGEDWKKSLKVP
PKDTRIRTTDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALLARDVLAR
AKNGTGKTGAYIIPVIERVEVDKKHIQALVLVPTRELALQTSSIATALGKHLGIRCMVTT
GGTSLRDDIMRLYDTVHIVIATPGRILDLMKKGVAKMDHCQMLVLDEGDKLLSQDFKGML
DSVIGHLPRERQILLFSATFPLSVKDFMKRHLNKPYEINLMEELTLKGITQYYAFVQERQ
KVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITELGYSCYYIHAKMNQQHRNRVFHDF
RNGACRNLVCSDLFTRGIDIQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGVAINLITY
DDRYNLHKIERELDTEIKPIPGVIDKSLYVAEYHSEASELEEQTQQQK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcagccacgagcatgaacagtatgagtgtggcgaaccacgccggccccattaaacag
atgaccaaacctgtggggatgccgagcggcgcaggattggccgcaaaccacggccagact
ggagacaacaagcccagcacagggcctggtgaggactggaagaaaagtctgaaggtgcct
ccaaaagatacgagaataagaacaacagacgtcactgctacgaagggaaacgagtttgaa
gactactgcttaaagcgggagctcctcatgggcatcttcgagatggggtgggaaaaaccc
tccccgatccaggaggagagcatccccatcgcactgctggcgagagacgtgttagcccgc
gccaaaaacgggactgggaagactggtgcttacatcattccagtgatcgagagggtggag
gtagataagaagcatatccaagctttggtacttgtgccaacacgtgagcttgccctgcag
accagcagcattgccactgctctaggaaagcacctgggcatcagatgcatggtcaccacg
ggcggcaccagcctcagggacgacattatgaggctatacgacactgtgcacattgtgatc
gctactcccgggcgaatcctcgaccttatgaagaaaggtgtggcaaagatggaccactgc
caaatgctcgttttagatgagggtgacaagctgctgtctcaggacttcaaaggcatgctg
gacagcgtgatcggtcaccttccccgggaacggcagatcctgctcttctcagccacattc
ccgctctctgtcaaggacttcatgaaacgtcacctgaacaaaccttacgagattaacctg
atggaggagctcacgctgaagggcatcacccaatattacgcttttgtgcaagaacgccag
aaggtccactgtctcaacaccctcttctccaagttacaaatcaatcagtccataatcttc
tgcaactccacccaacgtgtggagctgctggccaagaagatcacggagctgggctactcc
tgctactacatccacgccaagatgaaccagcagcaccgcaaccgcgtgttccacgacttc
cgcaacggtgcctgccgcaatctcgtatgctctgatctcttcactcgaggcattgatatc
caggccgtgaacgttgtgatcaactttgacttccccaagatggcggagacgtacctgcac
cgcatcggccggtccgggcgctacggtcacctgggagtcgccatcaacctcatcacctac
gatgacaggtacaaccttcacaagattgagcgagaactggatacagagatcaagcccatc
ccaggtgtgatagacaagagtctgtacgtggccgagtaccactcagaagctagcgagctg
gaggagcaaacccagcaacagaagtga
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