Branchiostoma belcheri (Belcher's lancelet): 109484526
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Entry
109484526 CDS
T07532
Name
(RefSeq) retinoic acid receptor RXR-alpha-B-like isoform X1
KO
K08524
retinoid X receptor alpha
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109484526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbel03000
]
109484526
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bbel03310
]
109484526
Transcription factors [BR:
bbel03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
109484526
Nuclear receptors [BR:
bbel03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
109484526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
109484526
NCBI-ProteinID:
XP_019643398
UniProt:
A0A6P5A252
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MGASLSQAQESLGSPGGVPAPASSTTSNPTTQHQPMHYSAPPHIPSMTSSGPHITSPPPT
LSSGQPPLTSNPSTITSPHLVQTPSVLTSPHPLHLHPGFGMPGVNQVSSSMQEDVKPVIS
QLGPTPLQNVSPHMMNTPLMVNTGQLTPPAQPLQSPRPSQTPMGLSKHICQICGDRASGK
HYGVYSCEGCKGFFKRTVRKDLTYACRDNRDCVIDKRQRNRCQYCRYQKCLAMGMKREDV
QDQRQGSGNSAVQEERQRSKEGKDGEVVSTTNPNEDMPVEKIQEAEMAVEPKDGNLVEQP
AASPTQENDPVTNICQAADKQLVTLVEWAKRIPHFSDLPIDDQVILLRAGWNELLIAAFS
HRSIDVKDGILLASGLHVHRSSAHQAGVGTIFDRVLTELVAKMRDMKMDKTELGCLRAIV
LFNPDAKGLTDPSLVESLREKVYASLEEYCKQQYPEQPGRFAKLLLRLPALRSIGLKCLE
HLFFFKLIGDTPIDTFLMEMLEAPGLGQTAASQGQGPMAQAAAQHREAQQQAQQGQPPS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcctcgctgtctcaagcgcaagaatccctgggcagccctggtggtgtaccggca
ccagcgtccagcacgacgtccaaccccaccacccagcaccagcccatgcactactccgca
cccccacacatcccctccatgacctcctcaggaccccacatcacctccccaccccccacc
ctgtcctcgggacagccccccctcacctccaacccctccaccatcacgtccccccacctt
gtacagaccccctccgtcctgacgtccccccaccccctacacctgcacccaggcttcggc
atgccgggagtcaaccaggtgtcctcatccatgcaggaagacgtcaaaccagttattagt
caactaggacccacccccctgcagaatgtgtccccccacatgatgaacacccccctgatg
gtaaacacgggtcagctcacccccccagcgcagccgctccagtccccccgcccctcccag
acacccatgggcctgtccaaacacatctgtcagatctgcggggaccgagcgtccgggaag
cactacggggtctacagctgtgaagggtgcaagggcttctttaaacggacagtacgtaag
gacctgacctacgcgtgtcgggataacagggactgtgtgatcgacaaacgccagcggaac
agatgtcagtactgccgctaccagaagtgtttagccatgggcatgaaaagagaagacgta
caagaccaacggcagggaagcgggaacagtgccgtgcaggaagagcgacagagaagcaaa
gaggggaaggatggagaggtggtcagcacgacaaaccccaacgaagacatgcctgtggag
aagatacaggaggctgagatggctgtggaacctaaggacggaaacctggtcgaacaaccg
gctgcgagtccgacacaggagaacgacccggtgacgaacatctgccaggcggctgacaaa
cagctggtgacgctggtggagtgggccaagcgcatcccgcacttctccgacctgcccata
gacgaccaggtcatcctacttagagcaggttggaacgagctgctgatcgcggcgttctcc
caccgctccatcgacgtgaaagacgggatcctgctggcgtccgggctccacgtgcaccgc
agctccgcccaccaggcaggcgtgggaaccatcttcgacagagtcctcaccgagctggtc
gccaagatgagggacatgaaaatggacaagacggaactcggctgcctgagagctatagtt
ctcttcaacccagatgccaaaggtctaactgacccgtcactggtggaaagcctgagagaa
aaggtttatgcctccctggaggagtactgcaagcagcagtaccctgaacagcctggcagg
tttgccaagctgctgctgcgcctgcctgccctccgctctatcggcctcaagtgccttgaa
cacctcttcttcttcaagttgatcggagacacgcccatcgacacattcctgatggagatg
ctggaggccccgggtctggggcagaccgcggcgtcccagggccagggacccatggcgcag
gccgcggcacagcaccgcgaggcacagcagcaagcacagcagggccagccaccctcctga
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