Branchiostoma belcheri (Belcher's lancelet): 109484631
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Entry
109484631 CDS
T07532
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109484631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbel03041
]
109484631
Enzymes [BR:
bbel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109484631
Spliceosome [BR:
bbel03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
109484631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
WHD_HA2
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
PWI
nSTAND3
Cas3-like_C_2
ATPase
Motif
Other DBs
NCBI-GeneID:
109484631
NCBI-ProteinID:
XP_019643537
UniProt:
A0A6P5AKC3
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MAGLQTWVNDRLYDILGMSDKYVGQYLIGLAEKSANPADFVERIRQTGTIDIDEPITRFA
HELYNKVPKKTTAKVSQSRLAEQAAIAMQKKNASYRLLSDSEDDVVEVKSKSKKRKKEGK
EKKRKQLRARREESSESESDHGRAASPMKKKGDSDSDLDEWEREEKERLRDLEERDAFAE
RLKERDKEKTRNIMERSDKKAYEEAQKRLKMAEEDRKKMLPELRKKSRRDYLKKREVDKL
DELEADVMDEEYLFAETKLTSREKKELEYKKKVLSLAKEHKRAGDVEKVQRYHMPEDKKG
DVGKYSYVEPEEEEKGPGSEQKRWEEEHLSSAVMRFGARDAKQKMKEKTQEKEYELLVED
DMIDFVSAVTMKGTIDTEDQPEQLSAAERKAQSIKEVKESLPVFRYREGLLEAIKEHQVL
IIEGETGSGKTTQIPQYLYEGGYCQGGMKIGCTQPRRVAAMSVAARVSEEMGFKLGNEVG
YSIRFEDCTSERTVLKYMTDGMLLREFLGEPDVSSYSVLIIDEAHERTLHTDILFGLVKD
IARFRPDLKLLISSATMDCEKFSEFFDNAPIFRIPGRRFPVDILYTKAPEADYLDACVVS
VLQIHVTQPDGDILVFLTGQEEIETANEMLTERTRKLGSKIRELLILPIYANLPSDMQAK
IFEPTPPGARKVVLATNIAETSLTIDGIVYVIDPGFCKQKSYNARTGMESLIVTPVSKAS
ANQRAGRAGRVAPGKCFRLYTAWAYKNELEDTTVPEIQRTNLGNVVLLLKSLGINDLIHF
DFMDPPPHETLVLALEQLYALGALNHRGELTKLGRKMAEFPVDPMLSKMIIASEQYKVVE
EILTITAMLNVQGSIFYRPKDKAVHADNARQNFFNMAGDHLTLMNVYNEWQDTEFSTQWC
YENFIQWRALRRARDVRDQLAGLIERVEIEPTSNPEDTVGIRKAITSGFFYHTARLSKSG
QYKTVKHQQTVMIHPNSCLFQEQPRWIIYFELVFTTKEYMRQVIEIENSWLLEVAPHYYK
GKELEDNSGKKMPKTVGKTREELKPMGT
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggcaggactgcagacgtgggtgaatgaccggctgtatgacatcctgggcatgagtgat
aagtacgtgggacagtacctaatcggtctggctgagaagtctgccaaccccgctgacttt
gtggagaggatcaggcagacagggaccattgatattgacgagcccatcaccagattcgca
cacgaactctacaacaaggttcctaagaagaccacagcaaaggtgtcccagtcccgtctg
gcagaacaggctgccatcgccatgcagaagaaaaatgcctcgtacagactcctgtctgac
agtgaagacgatgtggtggaggtcaagtccaagtccaagaagaggaagaaggaggggaag
gagaagaagaggaaacagctgagggccagaagggaggagagcagcgaaagtgagagtgat
catggcagggccgcgtctcccatgaagaagaagggtgactcggactctgacctggatgag
tgggagagagaagagaaggagcgattgagagacctggaggagagagatgctttcgcagaa
cgactgaaggagagggataaggagaagactcgcaacatcatggaaagaagtgataagaag
gcatacgaggaagcccagaagagacttaagatggcggaagaagacaggaagaagatgctc
cctgagctgaggaagaagtctcgccgggactacttgaagaagcgtgaggtggacaagctg
gatgagttagaggcagacgtcatggatgaggagtacctcttcgcagagaccaaattgaca
tctcgagagaagaaggagctggagtacaagaagaaggttctgagtctggctaaggagcac
aagcgggcgggagacgtagagaaggtgcagaggtaccacatgcctgaggacaagaaggga
gatgttgggaagtactcttatgtagagccagaagaagaagagaaaggccctggttcagag
cagaagcgttgggaggaggaacacctcagcagtgctgtgatgaggtttggagccagggac
gccaaacagaagatgaaggagaaaacacaggagaaggaatatgaactgttggttgaagac
gacatgatagactttgtgagcgcagtgacgatgaagggaaccattgacacagaggaccaa
cccgagcagctgtcggcagcggagaggaaagctcagtccatcaaggaagtgaaggaaagt
ctgcctgtcttcaggtacagggagggactactggaggctatcaaagaacaccaggtgttg
atcatcgaaggtgagacgggttccggtaagacgacccagatcccccagtacctgtacgag
ggggggtactgtcagggagggatgaagatcgggtgcacccagccgcgccgtgtcgccgcc
atgagcgtagccgctcgcgtgtccgaggagatgggcttcaaactcggcaacgaggtcggg
tacagcattcggttcgaggactgcacctcggagaggaccgtgctgaagtacatgacagat
gggatgctgctgagagagtttctcggggagccggacgtatcaagttacagcgttctgatc
atcgacgaagcccacgaaagaacgttgcacacagatatcctgtttgggctggtgaaagac
atcgccaggttccggccggatttgaaactcctcatatccagcgccaccatggactgcgag
aagttctcagaattcttcgacaacgctccgatcttccgcatccccgggagaaggtttccg
gtggacatcttgtatacaaaagcccccgaggcagactaccttgatgcgtgtgttgtttct
gtgctacaaatccatgttacacagccggatggggatatcctggtgttcctaacaggacag
gaagagatcgagacagccaacgagatgctgacagaacgcactcggaagctcggatcgaaa
atcagagagctgctcatcctcccgatctacgcgaacctcccgtcagacatgcaggcgaag
attttcgagccgacgccgccgggcgcgagaaaagtcgtcctggcgacgaacatcgcggaa
acgtcgctcacgatcgacggaattgtgtacgtcattgaccccgggttctgcaagcagaag
agttacaatgcacggacggggatggagtcgctcatcgtaacgcccgtctccaaggcgtcg
gccaatcagagggccggtagagctgggcgggtcgcaccgggaaagtgtttccgtctctac
acagcctgggcgtacaagaacgaactggaggacacgacggtgccggaaatccagagaacg
aacttgggaaacgttgtactactgttgaagagtctcggcatcaatgatcttatccacttt
gacttcatggatccgccaccgcacgagacgttggtcctcgcgcttgagcagttgtacgcg
ctcggagcactgaaccatcgcggcgagctcaccaaactcggccgcaagatggcggagttc
cccgtcgaccccatgttgtcgaaaatgatcatcgcgtcagaacagtacaaggttgttgaa
gagatcctgaccatcacggcgatgctgaatgtgcaggggtcgatcttctaccgcccgaag
gacaaggccgtccacgccgacaacgctcgacagaacttcttcaacatggcgggggaccac
ctcacactcatgaacgtctacaatgagtggcaggacacagagttctcgacccagtggtgt
tacgagaactttatccagtggcgagcgctgcggcgggcgcgggacgtccgggaccagctg
gccgggctcattgagcgcgtcgagatcgaaccaaccagcaaccccgaggacacagtcggt
ataaggaaggccatcacatcagggtttttctaccacacagcgcggctgagtaagagtggg
cagtacaagacagtgaaacaccagcagaccgtcatgatccaccctaacagctgtctgttc
caggagcagccacgatggatcatctactttgagctggtcttcactaccaaggagtacatg
agacaggtgattgagatagagaactcgtggctgttagaggtcgcacctcactactacaag
ggtaaggaactggaggacaactctggcaagaagatgcccaagaccgtcgggaagactcga
gaggagctcaagccgatgggaacgtga
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