Branchiostoma belcheri (Belcher's lancelet): 109484751
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Entry
109484751 CDS
T07532
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109484751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbel03041
]
109484751
Spliceosome [BR:
bbel03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109484751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
PRP4
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
NBCH_WD40
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_EIPR1
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_like
Motif
Other DBs
NCBI-GeneID:
109484751
NCBI-ProteinID:
XP_019643680
UniProt:
A0A6P4ZR51
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Position
Unknown
AA seq
509 aa
AA seq
DB search
MSDDEDVPLPAKKAKVVHFGSLEEVERQRLAKQEGQGSLGTDAVQAGILSGNINISEGET
FDLEEHQSERQKEVLEEFERRKRARQIHVSTDDSEVKAQLRQLGEPICLFGEGPADRRER
LRQILAKIGEDKLKKDSEEEKKEEKKEYNDTTWYHEGPQSLKDARMFIAGYSIPRAKKRL
ERARADKEIPAAQKNARMQELHRQLRALTNYGSQIGDSRPISFCKFSPNSQLLATASWSG
LCKLWSVPDCKLVRTLRGHNQNVGCVVFHPQATLTLEDSACCMASCSADGAVKLWSLESD
EPVANIEGHEARVARVAYHPSGRFLGTTCYDKSWRLWDLEAQEEVLHQEGHSKEVYDISF
QCDGSLCATCGLDAFGRVWDLRTGRCVMFLEGHLKELFAIDFSPDGYHLATGSADNTAKV
WDVRQRKCVYTIPGHTNLVSGLKYQGSEGQYLVTASFDCTAKVWAHPGWSPLKTLAGHEG
KLMSIDISPDSKFIATSSYDRTYKLWAAE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgaggatgttccactgccagctaagaaggcgaaggtcgtccacttcggc
agtctggaggaggttgagaggcagcgattggccaagcaggagggtcaagggtcactgggc
actgacgcagtgcaggctgggatactgtcggggaacatcaacatttcagaaggagaaact
tttgacttggaggaacaccagagtgagagacagaaagaagtcttggaggaatttgaaaga
cgaaaaagggctagacaaatccacgtgtcaactgatgattcagaagtcaaagcacaactc
agacagctgggagaaccaatatgtttgtttggagagggcccagcagacaggagagagcga
ttgcgtcagattctggctaagatcggggaagacaaactaaagaaggactcagaagaagag
aaaaaggaagaaaagaaagaatataacgacaccacgtggtaccacgagggtccccagagt
ctgaaggatgccaggatgtttattgctggctactccataccaagagctaagaagaggttg
gagagagctcgtgcagacaaggaaatcccagctgcacagaaaaacgccagaatgcaggag
ctgcacagacaactcagggccctgaccaactacggcagtcagataggagacagtcggccc
atctccttctgcaagtttagtccaaactcccagcttctagccacggcctcatggtctggc
ctgtgcaagttgtggtcagtcccagactgtaaactggtcagaacattacgaggacacaac
cagaacgtagggtgtgtggtgttccacccccaggcgaccctgaccctggaggactcagcc
tgctgcatggcctcctgcagcgctgacggtgccgtcaaactctggtcactggaaagtgat
gaaccagtggcgaatattgagggccatgaggcgagggtggccagagtagcgtaccatcca
tccggcaggttcctgggtacaacatgttatgacaagtcgtggagactgtgggacctggag
gcccaggaggaagtcttacatcaggagggacacagtaaggaagtctacgacatcagcttc
cagtgtgacggatcactgtgtgctacatgtggtctggatgcgttcgggcgagtgtgggac
ctgcggaccggcaggtgtgtcatgttcctggaggggcacctgaaggagctgttcgccatc
gacttctcacctgatgggtaccatctggccacaggaagtgcagacaacacagctaaagtg
tgggacgtgagacagaggaagtgtgtgtacaccatcccaggacacaccaacctcgtctca
ggcctcaagtatcaaggttctgaaggacagtatctggtcacagcatcttttgactgcaca
gcaaaggtctgggcccatcctggttggtcgcctctgaagacccttgcggggcacgaaggg
aagctgatgtccatcgacatttctcctgacagcaagttcattgccacttcctcgtacgac
cggacttacaaactctgggctgctgaatga
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