Branchiostoma belcheri (Belcher's lancelet): 109484855
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Entry
109484855 CDS
T07532
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60 isoform X1
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbel03019
]
109484855
Enzymes [BR:
bbel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109484855
Messenger RNA biogenesis [BR:
bbel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
109484855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
109484855
NCBI-ProteinID:
XP_019643772
UniProt:
A0A6P5AL10
LinkDB
All DBs
Position
Unknown
AA seq
1860 aa
AA seq
DB search
MAGRSREIPDSWEQLDEELEDVPDEESATDMPEESWDTSDDDSYEDPEEEARPSTPTRTL
SSDDSNSDSADSESESESDHEMENEDEGEISSIAKICLKHLPADNHIKSQWVSLLHDFVD
SELFIIDGDSLLLELLSEVNLDWSHGGQYLHLIFLVERFLHTFHQLGGIFHIVFFRDMQV
LWTSCPSMMLARHVIIQHLQENTAYTVTTNIPAADSPQWHQYLQNNRPAFVTISDGCQNL
PLGLPKNAVLAVFKTLLLHVLSEGVNCVYMSEIEHTATKAYGFYIECRPHIMNMWSKKYL
EYREKGQYPSMLSLLQQNVTEDCKNLEQLRSKLMKVSSSSLARSLPAGVRDVVTVVACSQ
VLDQRLTTADAQVTEDIVRFFLLHIVLLRHLSLRQRAQQLRDFSKAPFSFPVHLLSRVME
QVQVCMVEMLEECSRVGYFGEMETKFLSDIMDGRLFLQLSYFILDAHSRGQQASLLSEDV
RCELEVLWDIVTDISESELSPAFPVVASPVGRIEREDHSAEQKEHTANSVSDELEALGIH
SRAAFFPVSNKLVDAFAGNVNNCLPHLDRTDREVTAAITENQDFDETYHWHSGKPLADDY
DNTKDTFNHEQLPTDPWLRRKVLKDKQKFSRHMQSYGESLEGPGFRKVPIVVREKSDQKQ
EEKERKKKERQEMAKTAKQKTVKKSKKDLIIEAAKKKEEETKATQMLQQWQTLKTSLESS
KAVKSIRELETFVEKCSREQVPHVATEAQLTILQHKVDMWRDQCTKGDSAGDIGKPNLNT
AVDIVQTVSDIVDKYGQHLRSKQRQELAGALRLLGLSDMEGYIVISEGSEQDMVPDGLKV
HTKSKDEDTRCSVQMSSNRFQLRHMGHLLKREGREDADPRVQQFIPDTWQRELLDAVDNN
ESALIVAPTSSGKTYASYYCMEKVLRDGDDGVVVYVSPTKALVNQVAATVYARFSNKKMP
DGMSVYGVFTRDYRHNALNSQILVTVPQCLEILLLAPHRQKWAQKIRYVIFDEVHCMGSE
IGAEVWEHLLLLVPCPFLALSATISNPQDLQGWLQSAKDFQKQLDGQAKQRKKAHPQSYN
VRLVVYGERYSDLEKSVYLPCSNSEDSLVPMHPYSVLTVKQLQDNLDNPDGAFPRDLTLS
PRETLQLYDTMAQVWPERESLKALEADTYSDFATRDHLLITKAQARQYEADLKKELLTWL
KEHHKEKVRHVLEKLSRHMLQQQDTCAKEQQKHNIDITGEKFLSHQIVRLLDKLKQEDKL
PALVFSFSRGLIEHLVHKVDVTLEEMEMETLESMGVTQSSIKKDLAMMRKVEKGKKRVRD
KEEKGYTLEAKDVPDAKHVNQDGANMRLAFLKHSFVSEGLHSSEELQRYQRRINYLSGGH
LLKRGLRRGIGYHHAGMNAKERQTVETMFRNKHLKVVVATATLALGIHMPCKTVVFAGDS
VYLDALEYRQMSGRAGRRGFDSVGNVVFFGLPKPKINRLLAANVPELTGNYPLTPSLVLR
VMLLTAQGDDKTDAFNKALNLLKHPFLSHNQPQFLAQLQHHFLFSIQFLMRQGLLDLEGT
PQGMAGLASHLHYHEPSNFILVWLLQKGIFHQICVPEDGSTSHFSDDVLRRLVLILANLF
GRSYLRATITPQTVKDMKQRKELSQSKLILEDLPEFVSSSIRQYNQQTWKLFHSYLCTVA
EALAPQLGQETSLPASQIDFLSAGTGAPSADSQTLTAQLRQSQIHFSVVSTFAALSGLND
DNFQESDNMFESVRQGLYMDMDSAPTFLLEKHDRRGRRQYLNSYALDFFKHQSYDAIIKD
NGLRTGFAFQALKDFMMTIKSIYIALEQLGHEEDNVVMAFKQLAGRYDEAFNNAFGKNRT
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgctcaagagagatccctgacagctgggagcagctggatgaagagttagag
gacgtgcctgatgaggagtcagctacagacatgccagaggaatcctgggacacctctgat
gatgatagctatgaggacccagaggaggaagcaaggccttcaacccccacaaggacgtta
tcttcagatgacagcaattcagattctgcagacagtgagtcagagtcagagtctgatcat
gagatggaaaatgaggatgaaggagaaattagttctattgcaaagatctgcctgaagcac
ctgccagctgataaccacatcaagtcacaatgggtcagtctgttacatgactttgtggac
tctgaactgttcatcatagatggtgattctttgctcctggagctactttcagaggtgaat
ctggactggagccatggaggacagtacctacacttgatcttcctggttgagaggttcctc
cataccttccatcagctcggtggaattttccacattgtcttcttcagagacatgcaggtg
ctgtggaccagctgtccctccatgatgctggcccgtcacgtgatcatacagcatctccag
gagaacacagcctacacagtcacaaccaacataccagcagctgactctccacagtggcac
cagtatctacagaacaacaggccagccttcgttaccatctctgacggctgccaaaatctc
cctctaggtttacccaagaatgccgtcttggcagtttttaagacactgcttctgcatgtc
ttgagtgaaggagtcaactgtgtgtacatgtcagaaatagagcacacggctaccaaagcg
tatggattttacattgagtgtcgtcctcacattatgaatatgtggtctaagaaatacttg
gagtacagggagaaaggacagtatccttctatgttaagtcttctgcaacagaatgtgaca
gaagactgcaaaaatctggaacagttaagatccaaactgatgaaagtgagcagctccagc
ctggcccggtccctccctgctggtgtcagagacgtggtaacagttgtggcctgttcacag
gtgctggaccagcgactgacaactgctgatgcacaggtcacagaagacattgtccgcttt
ttcctgctgcacattgtgctgctgcggcacctctcactcagacagagagctcagcagctc
agggacttcagcaaggctcccttctcattccctgttcacctgctgtcacgtgtcatggag
caggttcaagtctgcatggtggagatgttagaggagtgcagcagggtcgggtactttggt
gagatggagacaaagttcctgtcagatatcatggatggacggctattcctgcagctgtcc
tatttcatcctggacgcacacagcagaggacagcaggcatctctgctgtcagaagatgtt
cgttgtgagctggaagtactgtgggacattgtaaccgacatcagtgagtcagaactgagc
cctgccttccctgtcgtagcttcgccagttggcagaatagagagagaggaccactctgca
gaacaaaaggaacacactgctaattcagtgtcagatgaacttgaagctctgggcatccac
agcagagctgcattcttcccagtgtccaataagctggtagatgcttttgctggaaatgtg
aacaactgtctgccacaccttgacaggacagacagagaggtgactgctgccatcactgag
aatcaagactttgatgagacctatcattggcattctgggaagccccttgctgatgattat
gataacaccaaggataccttcaatcatgaacaattgccaactgacccctggctgaggagg
aaggtcttgaaagacaagcagaagtttagcagacacatgcagtcatatggagagtcgcta
gagggaccaggttttagaaaggttcccattgttgttcgtgagaagtctgaccaaaagcag
gaagagaaagagaggaagaagaaagagcgtcaagaaatggcaaagacagccaagcagaag
acagttaagaaatcaaagaaagatctcatcattgaagcagccaagaaaaaagaagaagaa
acaaaagcgacacagatgcttcaacaatggcaaactttgaagacatccctggagagcagc
aaagctgtcaagtccatccgtgagcttgagacgtttgttgagaagtgtagccgtgagcag
gtaccacatgtcgccaccgaggcacaactcaccattctccaacacaaggtagacatgtgg
agggaccagtgtacaaaaggagacagtgcaggtgacattgggaaacctaatctgaacact
gctgtggacattgttcaaacagtgtctgacatagttgataaatatgggcagcacctgaga
tccaagcagagacaagaactggcaggtgcactcaggctcctgggactgtctgacatggaa
gggtacattgtaatatctgaagggtctgagcaggacatggtacctgatggtttaaaggta
catactaagagtaaggatgaagacacgaggtgttcagtacagatgagcagtaacaggttc
cagctccggcacatggggcaccttctgaagagggaggggagagaggacgctgatcccagg
gtgcaacagttcatccctgatacatggcagagagaactgctggatgccgtggacaacaat
gagtcagccctgattgtagctccaacctcctctgggaaaacctacgcctcctactactgt
atggagaaggtgctgagagatggggatgatggtgttgttgtctacgtctccccaaccaag
gcactggtgaaccaagtagctgccactgtgtacgctcgcttcagtaacaagaagatgcca
gatgggatgtctgtgtacggcgtgttcaccagggactacaggcataatgcactcaactct
cagatcctggtgacagttccacaatgtttggaaatcctgttactcgctcctcaccgccag
aagtgggcacagaaaattcgctatgtgatatttgatgaagtccactgcatgggctcagag
ataggagctgaggtgtgggaacacctgctcctgctggtcccctgccctttcctggctctg
tctgcaacaatatctaacccacaggaccttcaaggctggctacagtctgcaaaggacttt
caaaaacagttggatggtcaggcaaagcagaggaaaaaagcccacccacagtcgtataat
gtccggttagttgtgtatggagaacgctactctgacctggagaagtctgtctatctgccc
tgctccaactctgaagacagtcttgttcccatgcacccctactctgtcctgactgtgaaa
cagctccaggacaacctggataaccctgatggagcgtttcctcgggacttgactctgtca
cccagggagacactacagctgtatgacacaatggcacaagtctggccagaaagagagagc
ttaaaggcactagaagctgatacatacagtgactttgccacccgtgatcaccttctcatc
acaaaggcacaggccaggcaatatgaggctgacttgaagaaggaactgcttacctggctt
aaggaacatcataaggaaaaggttagacatgttctggaaaagctgagcagacacatgctg
cagcagcaagacacctgtgctaaagaacaacaaaagcacaatattgacatcactggtgaa
aaatttctgagtcatcagattgttagactgctggacaagttgaaacaagaagacaagctt
ccagctcttgtgttcagctttagtcgcggcctgatagaacaccttgtacacaaggtggat
gtaactctcgaagagatggaaatggagaccttggaaagcatgggagtcacccaatccagt
atcaaaaaagacctggccatgatgagaaaggttgagaaagggaaaaagcgtgtacgagac
aaagaagagaaggggtataccctggaagctaaagatgtgcctgatgctaaacatgtgaat
caggacggagccaacatgcgccttgcttttttgaagcacagctttgtttctgaaggcctc
cacagctctgaggagctgcagaggtatcagaggaggattaactacctctctggtggtcat
cttctgaagagaggcctgaggagaggcataggatatcaccatgctgggatgaatgcaaag
gaaaggcagactgtggaaacaatgtttcgaaataagcatttgaaggttgtcgtggctact
gcaaccttagcacttggtatccacatgccctgtaagactgtggtgttcgctggtgattct
gtgtatctggatgccctggagtacagacagatgtctggacgtgcaggcagaagagggttt
gattctgttggcaatgtggtattttttgggttgcctaagccgaagatcaaccgactgctt
gccgctaatgtccctgagctgacagggaactacccgctaactcccagcctggtgctcagg
gtcatgctgctgacggctcagggggacgacaaaactgatgcctttaacaaggctctcaat
ctcctgaagcatccgttcctgtctcacaaccagccacagtttctagcccagctgcagcac
cacttcctcttcagcatacagttcctcatgcgtcagggcctgctagacctggagggcacc
ccgcaaggcatggcaggcctggccagccacctgcactatcatgaaccctccaatttcatc
ctggtgtggctgctgcagaagggcatctttcaccagatctgtgtgcctgaagacggttct
accagtcacttctctgacgacgtgttacgtcgattggtgctgattctggctaacctgttt
gggaggagctacctgcgagctacaatcactccacaaacagtcaaggacatgaaacaaaga
aaggaactcagccagtcaaagttgattctggaagacctcccagaatttgtgtcttcatcc
atccggcagtataatcaacagacgtggaaattgttccactcctacctgtgtactgtggca
gaggccctggctcctcagcttggtcaggagaccagcctacctgcttcccaaatagacttc
ctgtcagcaggcactggtgccccatcagcagacagtcagacactgacagcacagctccgc
cagtcccagattcacttcagtgtagtttccacatttgctgccctctctggcctcaatgat
gacaactttcaggagtccgacaacatgtttgagtctgtgcgacaaggtctgtacatggac
atggactcagcacccacctttctcctggagaaacacgacagacggggtcgtcggcagtac
ctaaactcctatgcactggacttcttcaaacaccaatcctacgatgcaatcattaaggac
aatgggctgagaactggctttgccttccaagcgctgaaggactttatgatgaccatcaag
tccatctacatcgccctggaacaactcggacacgaagaggacaacgtggtcatggcattc
aagcaacttgcagggcggtatgatgaagctttcaacaatgcctttggaaagaatcgcacg
tga
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integrated database retrieval system
