Branchiostoma belcheri (Belcher's lancelet): 109485266
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Entry
109485266 CDS
T07532
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbel03019
]
109485266
Enzymes [BR:
bbel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109485266
Messenger RNA biogenesis [BR:
bbel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
109485266
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
HA2_C
DEAD
HA2_N
AAA_22
AAA_16
AAA_19
nSTAND3
Rad17
Motif
Other DBs
NCBI-GeneID:
109485266
NCBI-ProteinID:
XP_019644300
UniProt:
A0A6P4ZT13
LinkDB
All DBs
Position
Unknown
AA seq
1289 aa
AA seq
DB search
MSDERHHKHRREEKQHGKKKSSKDTSRDDDHRRRKHHHRGEDRQSDRDQSGGYGETIRHQ
GASCSHEVHHRDREKEGSSEGYRKKHGRSDRRREEDEEKHRDRHRKTEVLGDKDKEKYRG
KHMHDRLREDAKARDKHGRMEGRRDEEEEEEEEEWGRQEMWEFNWEEYRSTLNKIFFRDE
DFIERGTPEYADFWAFFHRYCKFQRKKSAEQKPHKSHPNPPQEQQKTLGLPEKYDKRYRI
NFSIKTKDVEEKLKYLRTGSRTNDDEDLTPSRVAEFRLALLHYIDFCQKQKLQKLAKLRQ
DQASLPIHQYRDQIVEAVRQHRVVVVAGDTGCGKSTQVPQYLMSAGFTRIACTQPRRIAC
ISLAKRVGYETLNEYGSEVAYQVRFEGSKTASTRILFLTEGLLLRQVTTDPTLSQYSIIV
LDEVHERHLNGDFLLGVLRALLRAREDLKMVLMSATINIKLFAGYFNGAPVIQVPGRLYP
IQLEYLPIKQEEQTSKSERLDPRPYLRVMQRIDHKYPGTERGDLLIFLSGMSEITAVVEA
ARLYAQQTKRWIVLPLHSTLSIEEQDKVFDIAPEGVRKCIVSTNIAETSITIDGVRFICD
SGKVKEMSYDPGAKMQRLQEFWISRASAEQRKGRAGRTGPGVCFRMYDESDYDNFQEYAT
PEIQRVPLDSTLLQMISMGLKNTRKFPFIEPPAMSSIENSVAFLKEQGALTEEETLTPIG
RMLARLPVDVVIGKMLIMGTVFHVIDPVLSIAAALSVQSPFHQSARTNPDAMHARRPLES
DHGDPFTLLNAFDEWIQVKAGGRNSSRKWCRRRGLEEQRFYEMVKLKEQFKDLLKDHGLL
EGEEDHYYREEERRKRHGERRRLQELKRQHDKGPRKRKILKLEHEDIELSGGDDDDDEVD
IKDIEFKLKHDLNQLQETSNQTRSFTLRDILLLKVVLCSGLYPLVAIADDCNTYRRDSEQ
VFHTKSKQFVVLHPTGVFSTNPEPLQLPHTEGKQGVAQPKGQVSSKHQLLAYTSLLETNK
PYLVNTMRVPALQTLMLYAHCLDTNQDCTRIVSDHWLELTFPESEAAQLLLSSVIQLRAT
WAKLLGLRLQESTKRNKDDGDEDDTSRKARKLEKVLAHKLTEFLSSDVEYSIRRLGNSEI
KNLFVGLLEVGSTATEPVPSLFSGECRPHPTKGGVQINDYLTYNCLQDDGMSVHSFMAHL
RNSWTCPTCQVDMAVTVLERLQHEDQCQNKQDVSVDESRQQGGPSSLERLRKPYFCTTCQ
QEFSFTNTEILKHRKTHSQPAATGEGSTT
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgaaagacaccacaaacatagacgggaagaaaagcaacatggaaagaaaaaa
agcagcaaggatacttcaagagatgacgaccataggaggagaaaacatcatcacagaggt
gaagatagacagtctgatcgggaccagtctggagggtatggggaaacaataagacatcag
ggtgcctcatgttctcatgaggttcatcatagagacagagagaaggaaggttctagtgaa
ggatacagaaagaagcatggtagaagtgacagaaggagggaagaagatgaggagaaacat
agggacaggcacagaaaaactgaggtgttgggagataaagacaaggaaaagtacagaggc
aaacatatgcatgatagactgagagaggatgcaaaagccagggacaagcatggtagaatg
gagggaaggagagatgaggaggaggaggaagaagaagaggagtggggccgtcaggagatg
tgggagtttaattgggaggagtacaggtcaactctcaacaagatcttctttcgtgacgag
gattttattgagaggggaactccagagtatgctgacttctgggcattcttccaccgatac
tgtaagttccagaggaagaagtcagctgaacagaaaccacacaaatcacaccccaaccca
ccgcaggaacagcagaaaacactgggactaccagagaaatacgacaagagatacagaatc
aacttctccatcaagactaaagatgtggaggaaaaactcaagtacttaaggacaggctca
aggaccaatgatgacgaggatctgacccccagccgagtggccgagttccgtctggctcta
ctccactacatcgacttctgtcagaaacagaagctgcagaagcttgctaagctgcggcag
gaccaggccagcctgccaattcaccagtacagggaccagatcgtggaggcagtcaggcag
caccgcgtggtggtggtggcaggggataccggctgtgggaaatctactcaggtgccccag
tatctcatgtcagctggctttacccgcatcgcgtgcacccagccccgccgtatcgcttgt
atctccctcgccaaacgtgtcgggtacgagactctgaacgagtacgggtcagaggtcgcc
taccaggtcaggtttgaggggagtaagacagcttcaactaggattctgttcctcactgaa
ggcctgctgcttagacaggtgacaactgaccccaccctgtcccagtacagcatcattgtc
ctggatgaagtccatgagcggcacctgaatggtgacttcctgctgggcgtgctgcgagcg
ctgctgcgggcgcgggaggacctgaagatggtcctcatgtcagccaccatcaacatcaaa
ctgttcgctgggtacttcaacggggcaccggtcatacaggtccctggcagactgtaccct
attcagctggagtatctccctatcaaacaggaggagcagaccagtaagtcagagagactt
gacccccgaccttacctgagggtcatgcagaggattgaccacaagtatcccggtacagag
cgcggagacctgctgatattcctgagcgggatgtcggagatcacagccgtggtggaggct
gcccggctgtacgcacagcagaccaagcgctggatcgtcctgcccctgcacagcacgctg
tccatagaggaacaggacaaggtgtttgacattgcccctgagggtgtgcggaagtgcatc
gtgtccaccaacatcgctgaaacctccatcacaatcgacggtgtcaggtttatatgtgac
tcagggaaggtgaaggagatgagttatgacccgggtgctaagatgcagcgtcttcaggag
ttttggattagccgagcgagtgctgagcagagaaagggcagggcaggacgtaccggcccg
ggagtgtgtttccgtatgtacgatgagtcagactacgataacttccaggagtacgccacc
cctgagatccagcgtgtgcccctggactccacactcctgcagatgatctctatgggcctc
aaaaacaccaggaagtttcccttcattgagcccccggccatgtccagtattgaaaactct
gtggctttccttaaggagcagggagcattgacagaggaagagacactgactcccattgga
cggatgttggctcggctaccggtagatgtggtgattggcaaaatgcttatcatgggaact
gtgttccatgtcattgaccccgtgttgtccatagcagcagccttaagtgtgcagtctccc
ttccaccaatcagcacgcaccaatcctgatgccatgcatgcacgaagacctctagagtcg
gaccatggagacccctttactctgctgaatgcctttgatgagtggattcaggtgaaggcg
ggagggcggaactcgtccaggaaatggtgccggaggaggggactggaggagcagaggttc
tacgagatggtcaaactcaaggaacagtttaaggacctgctcaaggaccatggactgctg
gagggtgaggaggatcattactaccgtgaggaggagaggaggaagagacacggggagagg
agaagactacaggagctgaagagacaacacgacaagggacccaggaagaggaaaatcctc
aagctagagcacgaggatatagaactgagtggtggagatgacgatgatgatgaggttgac
attaaagacatcgaattcaagttgaaacatgacctgaaccagcttcaggaaacatccaat
cagacgcgcagtttcaccctccgcgacatccttctcctcaaggtcgtgctctgcagtggc
ctgtaccccttggttgccatagcagatgactgcaacacttacagaagagactcggagcaa
gtcttccacactaaatccaaacagtttgtagtgctgcaccccacgggtgtgttctctacc
aaccctgaacccctccaactgccccatactgaggggaagcagggtgtggcccagcccaag
ggacaagtcagcagtaaacaccagctgctggcttacacatccctactggagaccaacaag
ccttaccttgtgaacaccatgcgggtccctgccctacagaccctgatgctgtacgcacac
tgtctggacaccaaccaggactgcacaaggatagtgtctgaccactggctggagctgacc
ttccctgagtcggaggcggcccaactcctgctgtcctcagtcatccagctgagggccacc
tgggccaaactactggggctcaggctgcaggagtcgactaagagaaacaaggacgatggt
gatgaagatgacaccagcaggaaagcgaggaagctggagaaggtgttggcccacaagctg
acagagttcctgagcagtgatgtggagtactccatcaggagactcggcaactctgagatc
aagaacctgtttgtgggcctgctggaagtaggttccacagcaactgagcctgtgccatcc
ctgttctctggtgagtgccgaccccacccgaccaaaggtggtgtacagatcaacgactac
ctaacctacaactgcctgcaggatgatggcatgtctgtgcacagcttcatggcgcacctg
cggaacagctggacctgtcccacctgtcaggtggacatggccgtcaccgtgctggagagg
cttcagcacgaggaccagtgtcagaacaaacaagatgtgtctgttgatgagtccaggcag
cagggtggtccgtccagcctggagagactgaggaaaccttacttctgcaccacctgtcaa
caggagttctccttcacaaacactgagatcctgaaacacaggaaaactcactctcaacct
gctgccacaggggaaggatctacaacatga
DBGET
integrated database retrieval system
