Branchiostoma belcheri (Belcher's lancelet): 109487991
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Entry
109487991 CDS
T07532
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbel03041
]
109487991
Enzymes [BR:
bbel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109487991
Spliceosome [BR:
bbel03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
109487991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
109487991
NCBI-ProteinID:
XP_019647692
UniProt:
A0A6P5AXB6
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MASQSVWKPAHKLREGRRTADVLNTEGADFASLLLTEPVQRGLTLAGFERPSPIQLKAIP
LGRCGLDLIVQAKSGTGKTCVFAVIALESLVLETYSTQVLVLAPTREIAVQIHDVLESIG
QAMVGLKCHVFIGGLPVHEDKQKLRKCHIAIGSPGRIKQLIELGVLKTSSIRLFVLDEAD
KLLETGSFQEQINWIYSSLPDNKQMVALSATYPESLAQHLQVYMRDPTFVRLDVQDLSLK
GIKQFYSVMPQMSSMSKAFQAKTDQLIKLLSRVPFHQCLVFSNDQGRAQRLSEDLNSKGW
PTAYISGSQEQTQRLNAMSQLRNFQCRVLVSTDLTARGIDADKVNLVVNLDVPQDWETYM
HRIGRAGRFGTQGAAVTLVYSGKEEGRLENITQHCRLSLQPLPNPIPSTLITSKDVTSQE
VMSSGDLVTVTTLSTTQKYPEEQESLEPPGDSCKMVHGICPHTAASGRAGPKSLNTTNTN
GAGDGNSLIRQKACCQSQQSQSEQCLNDQSEQSFNNQSEETFSNQSELSFKNQSEETIIN
QSEKVLNNHSENPLNNQSEHERCSQLHQQPKNSYNSRVSTGSRSTLSVSLSDSCSQGSYS
LDEEADSNSCDKSMHEVFLHQSEMEKESTVNLEGDFERKLPVREVRIPSLASFKGQQKVR
LTFQQAAEDLEHFLTHGTEKYGAHNVQQFIVKQTMKEARKDSERTIQDGDVSCSPEVRET
VPKREKRKPIGSGRLQLADELSNMSDHIEDILNSYGEGASVKAHLDNPQYNEENLKHLVA
KNQDSRMSTEIDTAEKTWSTWSKQGARPKGSKVSKENSSELNGFNDDGIQKLHRTDREDN
DCPWEEQEEEEFIDSEGDGGSDEEWEESEGEETDDEWEEEEDESDSTETGEEYSEEDYDS
YINQPRSFYSNNHENYYYQPDNTYPQYTDHAPPPYYEGYPWYGENTTTGECSEQYTSAPY
WSVPGRTAIGETWCCCGRRDCVRNRWLSTWARAYSSQCLYMAAMLGNRDLR
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccaaagtgtttggaaaccggcgcataagttgcgggagggcaggcggactgca
gacgttctgaacaccgagggagcagacttcgcctctctgctgctgaccgagcccgtacag
cggggactcactctggcaggcttcgagaggccgtctccgattcaactcaaggccattccg
ctaggcagatgtggcttagacctgattgtccaggccaagtcaggtacagggaagacctgt
gtgtttgcagtcatcgctctggagagtctggtgttggagacatacagtactcaggtcctg
gtccttgcccccaccagagagattgctgtacagatccatgacgtgctggagtctatcggc
caggccatggtgggactgaagtgccatgtgttcattgggggactgcctgtccacgaggac
aaacagaaactcaggaaatgccacatcgccattggctcaccaggccgcatcaagcagctg
atagaactgggtgtactgaagaccagcagtatcaggctctttgttttagacgaagcagac
aaacttctggagactggcagctttcaggaacagatcaactggatttactcgtcactacct
gacaacaaacaaatggttgccctgtcggcgacctacccagaatcccttgcacagcacctg
caggtgtacatgagagacccgaccttcgtcaggctggatgtccaggacctgtccttaaaa
gggatcaaacagttttacagtgtcatgcctcagatgtcttcaatgtccaaggccttccaa
gctaaaacagaccagctgatcaagcttttgtccagagtgcctttccaccaatgtctcgtc
ttctccaacgaccaggggagagcccagaggctttctgaggacctaaactccaagggatgg
ccaacagcatacatttcaggaagtcaagaacagacccagaggctgaatgcgatgtcccaa
ctcaggaacttccagtgtcgagtcttggtgtcaacagatttgactgcccgtggcattgat
gcagacaaggtgaacttggtggtgaacttggacgttccccaggactgggagacctacatg
cacaggataggccgggcgggacggtttggaacccagggtgcggcagtgacgctggtgtac
agtgggaaggaggagggcaggctggagaacatcactcaacactgtcgtctgtctctacag
cctctgcccaacccaatcccttcaactctgatcacaagcaaggatgttacatctcaggag
gtgatgtcctcaggtgacctggtaaccgtgacaaccctttccacaacacaaaagtatcct
gaagaacaagagtcacttgaaccacctggagactcctgtaaaatggtacatggaatctgc
cctcatacagctgcatcaggtagggccggtcctaaatctttaaacacaactaacacaaat
ggagcaggagatggaaacagcctaataaggcagaaagcttgctgtcaatcacagcagagc
caatcagagcagtgtttgaatgaccaatcagagcagtcattcaacaaccaatcagaggag
actttcagcaaccaatcagagctgtccttcaaaaaccaatcagaggagactatcatcaac
caatcagagaaagtcttgaacaaccattcagaaaacccactgaacaaccaatcagagcat
gagagatgcagtcagcttcatcaacaaccaaaaaactcctacaattccagggtctcaaca
ggttcgagatcaactctgtcagtgagtctttctgatagttgcagtcaaggtagttattcc
ctcgatgaagaggcagattccaatagttgtgacaaatctatgcacgaagtcttcttacac
caaagtgaaatggaaaaggaaagtacagtgaacttggagggggactttgagagaaagttg
ccggtgagagaagtgaggattccatctctagcatcgttcaaaggacagcagaaagtcagg
ctaacattccaacaggcagcagaggacctggaacatttcctaacacatggtacagaaaag
tatggagcccacaatgttcaacagttcattgtaaaacaaacaatgaaggaagcgaggaaa
gactctgagagaactatacaagatggtgatgttagttgcagtcctgaagttcgtgaaact
gttccaaagcgtgagaagagaaagccaattggaagtggaaggctacagttggcagatgaa
ctctccaacatgagcgaccatatagaagatatcttaaacagttatggtgagggtgcaagt
gttaaagctcacctagataatcctcagtataatgaagagaatctgaaacacttagtagca
aagaatcaagactctcgaatgtcaacagaaatagatactgctgaaaagacttggtcgacc
tggtcaaaacaaggagcaagacccaagggaagtaaggtatccaaagaaaattcatcagaa
ttgaacggatttaacgatgatggaatacaaaagctccacagaacagacagggaagacaat
gattgcccatgggaagaacaagaggaggaagagttcattgattctgagggggatggaggt
agtgatgaggaatgggaggagagtgagggagaagaaactgatgatgaatgggaagaagag
gaagatgagagtgactcaacagagactggtgaagaatacagtgaggaggattacgacagc
tacatcaaccaaccaaggtccttctattccaacaaccatgagaactactattaccaacct
gataatacttacccacagtacactgaccatgcaccaccgccatactatgaagggtatcct
tggtatggtgaaaacacgacaactggcgagtgcagtgaacagtacaccagcgccccctac
tggagtgtaccaggaaggacagctataggtgaaacttggtgctgctgtggtaggcgagac
tgtgtgaggaacaggtggttgtccacctgggcacgggcttattcctcacagtgtttatac
atggcagccatgctgggcaatagagacttaaggtag
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