KEGG   Bartonella bennetti: ACJTDF_06690
Entry
ACJTDF_06690      CDS       T11809                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bben  Bartonella bennetti
Pathway
bben03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bben00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACJTDF_06690 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bben03021]
    ACJTDF_06690 (rho)
   03019 Messenger RNA biogenesis [BR:bben03019]
    ACJTDF_06690 (rho)
Transcription machinery [BR:bben03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     ACJTDF_06690 (rho)
Messenger RNA biogenesis [BR:bben03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ACJTDF_06690 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 OB_RNB AAA_22 NACHT S1CSD-TOTE-2 DUF6360 Spore_III_AA
Other DBs
NCBI-ProteinID: XLI61478
LinkDB
Position
complement(1487236..1488501)
AA seq 421 aa
MQEMKLQELKSKNPVELVSFAETLEVENASLMRKQELMFAILKKLTLQNVEIIGEGVVEV
LQDGFGFLRSADANYLPGPDDIYLSPTQIQNFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFEDPEKIRYKIHFDNLTPLYSNERFQMEVQNPTDKDMSSRVIDLISPLGKGQRGLIV
APPRTGKTVLLQNIAHSITTNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAI
RHVQVAEMVIEKAKRLVEYGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRTFPA
MDILKSGTRKEELLVARQDLHKIFVLRRILAPMSVTDAIEFLIDKLKQTKNNSEFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaagaaatgaaattacaagaactcaaaagtaaaaatccagttgaacttgtttctttt
gctgaaacattagaagttgaaaatgcttcattaatgcgcaaacaagaattaatgtttgct
attttgaaaaaacttaccttacaaaatgtagaaattataggcgaaggtgttgttgaagtt
ttacaagatggatttggatttcttcgatctgctgatgctaattatcttccaggaccagat
gatatttatctttcaccaacacagatacaaaatttttcattaaagacaggagacactgtt
gaaggtccaataagagggccaaaagaaggagaacgttattttgctcttcttaaagttaat
acaattaattttgaagatcctgaaaaaattcgttataaaattcattttgataatcttact
cctctttattcaaatgaacgtttccagatggaagtgcaaaatcctacagataaagatatg
tcatcgcgagtaattgatttgatatctcctttaggaaaagggcaaagaggtttgattgtt
gcaccaccgcgaacaggaaaaacagttttattgcagaatattgctcattctattacaaca
aatcatcctgaatgttatcttattgttttattaatagacgagcgtccagaagaagttact
gatatgcaacgttctgtaaaaggagaagttgtttcttctacttttgatgaaccagcaata
cgtcacgtacaagtagccgaaatggttattgaaaaagctaagagattagttgaatatggg
cgtgatgtcgttattcttcttgattcaattacacgtcttggacgtgcatataatactgtt
gttccttcatcaggaaaggttttaacaggtggtgtggatgcgaatgctttacaacgtcct
aagcgtttttttggtgcagctcgtaatattgaagaagggggatctctaactattatagca
acagctttaatagatacgggaagccgtatggatgaagttatttttgaagagtttaaggga
actggtaattcagaaattgttcttgatcgtaaagttgctgataagcgtacttttccagct
atggatattcttaaatcagggacacgtaaagaagaacttttggtagctcgtcaagatcta
cataagatttttgttcttcgtcgtatattagcacctatgagtgtaacagatgctattgaa
tttttaattgataaattaaaacaaacaaaaaataatagtgaattttttgattcaatgaat
acgtaa

DBGET integrated database retrieval system