Besnoitia besnoiti: BESB_000480
Help
Entry
BESB_000480 CDS
T10139
Name
(RefSeq) putative pre-mRNA-processing protein 8
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
bbes Besnoitia besnoiti
Pathway
bbes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BESB_000480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbes03041
]
BESB_000480
Enzymes [BR:
bbes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BESB_000480
Spliceosome [BR:
bbes03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
BESB_000480
Complex C
U4/U6.U5 tri-SnRNP related factors
BESB_000480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_N
HA2_C
Helicase_C
AAA_22
DEAD
Cas3-like_C_2
T2SSE
AAA_19
Motif
Other DBs
NCBI-GeneID:
40305111
NCBI-ProteinID:
XP_029221715
UniProt:
A0A2A9MNC6
LinkDB
All DBs
Position
I:354251..360024
Genome browser
AA seq
1040 aa
AA seq
DB search
MEDSSGGLSASRVRELLHSSLGFSTRAVADMVLDAALSATSLSSLSSRLEEVGLSSSQAS
RLATVLIAERQTGGDASAPSSSRARDDGESSFSAPSSKRARGAESSSSSSPSSPSSSPAE
DEAARRAREREEDEAERDAFVTRLREREQASSRKVGFARARQAEREREEARWKEGEADKE
ATAALSDPIDLVLEARKGRNEKLRDNEAYVQRLREEARRTYLKKREDDRIALAERTLKDK
EWMFAGEKLTEQEKKDLEVERTTLEIAKTVVREREARGVIDSYVMPDSYDEDQQARLNVM
NQKYVEAKEHVSEQLLVERQKAAYAHVAFGAQKGREDDANRKKYALLNEEGGTIDFELLE
THGKQPLDDEDWNLSREDKEEKARQQRKLAQLSLQEERKMLPVYGYRTEFLKAVREYPVL
IVVGETGSGKTTQLPQYLYEVGYGKAGKIGCTQPRRVAAMSVAARVATEVGCKLGLEVGY
SIRFEDCTSDKTILKYMTDGMLLREFLTEPDLASYSVMMIDEAHERTLHTDVLFGLVKDL
ARFRKDFKLIVSSATLEAEKFSEYFDNAPIFRIPGRRYPVQIYYTKAPEANFIDATVVTV
LQIHLTQPLGDILVFLPGQQEIEEALEELERRVRGRGTEIGELILLPIYSTLPSELQAKI
FEPTPEKARKVVLATNIAETSITIDQIVYVIDCGFCKQNTYSPKTGMESLVTVPCSKAAV
NQRAGRAGRVRPGHCFRLYTRFSYEKEMEDANVPEIQRTSLGHVVLALKSLGIDDLINFD
FMDPPPPETLIKALELLYALGALNDKGQLTKLGRRMAEFPLEPMYSKMILQGEKFRCVDE
CITICAMLGAGNSIFYRPKDKAMHADNARKNFFRPGGDHLTLLNLYKQWEDTSFSVPWCY
ENFVQHRTIQRARDVREQLLDLLPRVEVEPSSDPTDADAIRKAVTSGFFTQGARLNRNGT
YSTIKQPHTVEIHPQSSLFGETPKVVLYTELVLTTKEYMRNVMEIRPEWLLEVAPHFYRD
KELELGKVPVQPKKGREKLV
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcgtcgggcggcctgtctgcctcgcgcgtgcgagagctcctccactcctcg
ctcggtttctcgacgcgcgccgtcgcggacatggtcctggacgcggcgctctccgcgact
tcgctttcctctctctcttctcgtctcgaagaagttggtctctcttcgtcgcaagcctcg
cgactggcgactgtgctcatcgccgagcgccagactggcggcgacgcctccgccccatcc
tcctcgcgggcgcgcgacgacggcgaatccagtttctccgcgccctcctcgaagcgcgcg
agaggcgcagaatcctcctcttcttcttctccctcttctccctcttcttcgccggccgaa
gatgaggccgcgcggcgtgcgcgcgagcgcgaagaggacgaggcggagagggacgccttt
gtaacccgactgagggagcgggagcaggcatcgtcgcgcaaagtcggcttcgcgcgggcg
cggcaggcggagcgtgagcgcgaggaagcgcgctggaaggagggcgaggcggacaaggag
gcgaccgcggcgctgtcggatccgattgacctcgtcctcgaggcgcgcaaaggccgcaac
gagaagctccgcgacaacgaggcctacgtccagcggctgcgcgaggaggcgcggcggacg
tatctgaaaaagcgcgaagacgaccggatcgcactcgcagagcgcacgctgaaggacaaa
gagtggatgtttgccggcgagaagctgactgagcaggagaagaaggatctcgaggttgag
cgcacgacgctggagatcgcgaaaaccgtcgtgcgcgagcgcgaggctcgcggcgtcatc
gactcctacgtgatgcccgattcctacgacgaagaccaacaggcgcggctcaacgtgatg
aaccaaaaatacgtcgaggcgaaggaacacgtcagtgagcagcttctcgtcgagcggcag
aaggccgcctacgcccacgtcgccttcggcgcccagaagggacgcgaggacgacgcaaac
aggaaaaaatacgctctcctcaatgaggaaggtggcacgatcgacttcgagctcctcgaa
acgcacggcaaacagcccctcgacgacgaggactggaacctctcccgcgaagacaaagag
gaaaaggctcgccaacaacgcaaactcgcgcaactctccctgcaggaggagcgcaagatg
ctgcctgtttacggctaccggacggagttcctcaaggctgtgcgcgagtatcccgtgctc
atcgtggtgggcgagacgggcagcggaaaaacgacgcagctgccgcagtacctctacgaa
gtcggctacggaaaagccggaaaaatcggctgcacgcagccccgcagagtcgccgccatg
tccgtcgccgcccgcgtcgcgactgaagtcggatgcaaactcggcctcgaggtgggatat
tcgattcgcttcgaagactgcacttcggacaagacgattttgaagtacatgacggacggc
atgctgctgcgcgagttcctgaccgagcctgaccttgcgagctattcggtcatgatgatc
gacgaggcccatgaacgcacgcttcacaccgacgtcctcttcggtcttgtgaaggatctc
gctcgcttccgcaaggacttcaagttgattgtttcctcggcgacgctggaggcggagaag
ttctcggagtattttgacaacgcgccgattttccgcattcctgggcggcgctaccccgtt
cagatttactacacgaaggcgccggaagcgaatttcatcgacgcaaccgtcgttacagtg
ctgcagattcacctgacgcagccgctcggcgacatcctcgttttcctcccggggcaacag
gagatcgaagaggcgctcgaggagctcgaacgaagagtgcgcggccgcggcacggagata
ggcgagttgattcttctcccgatctactcgacactcccgagcgagctgcaggcgaagatc
tttgagccgacgcctgagaaggcgcggaaagtcgtgctcgccaccaacatcgccgagacc
tccatcacaatagatcaaatcgtctacgtcatcgactgcggattctgcaaacagaacacc
tacagcccgaagacaggcatggagtcgcttgtgaccgtcccctgcagcaaggccgcggtg
aaccagcgcgcaggccgcgcaggtcgtgtgcgccccgggcactgctttcggctctacacg
cgtttctcgtacgaaaaggagatggaggacgcgaacgtccccgaaatccagcgaaccagt
ctcgggcacgtcgttctcgcgctcaagagtctgggcatcgacgacctgatcaacttcgac
ttcatggatccacccccacccgagacgctgatcaaggccctcgagctcctctacgccctc
ggcgcgctcaacgacaagggacagctgacgaagctgggacggcgcatggcagagtttcct
ctggagccgatgtactcgaagatgattttgcagggggagaagttcaggtgcgtcgatgag
tgcatcacgatctgtgcgatgctaggcgccggaaacagcatcttctacagaccgaaggac
aaagcgatgcacgccgacaacgccagaaagaacttcttccgacctggcggcgaccatttg
acgctgctcaatctctacaagcagtgggaagacacgtctttttcggtgccgtggtgctac
gagaacttcgtgcagcaccggacgattcagcgggcgcgagacgtccgcgagcagctcctc
gatttgcttccgcgcgtagaagtggagccttcctcggacccaaccgacgccgatgccatt
cgaaaagccgtcacatctggattcttcacgcagggcgcgcggctgaaccgcaacgggacg
tactcgacgatcaagcagccgcacacagtggagattcatccgcagtcgagtctgtttggc
gagacgcccaaggtcgtcttgtatacggagttggtgctgacgacgaaggagtacatgcgc
aacgtgatggagattcggcctgagtggttgctcgaagtcgcgccgcacttttaccgagac
aaggagctcgagctcggcaaggtgccggtccagcccaagaaaggacgggaaaagcttgtc
tga
DBGET
integrated database retrieval system
