Besnoitia besnoiti: BESB_008260
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Entry
BESB_008260 CDS
T10139
Name
(RefSeq) ATP-dependent RNA helicase
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
bbes Besnoitia besnoiti
Pathway
bbes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BESB_008260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbes03041
]
BESB_008260
03009 Ribosome biogenesis [BR:
bbes03009
]
BESB_008260
Enzymes [BR:
bbes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BESB_008260
Spliceosome [BR:
bbes03041
]
Complex A
U2 snRNP components
U2 related factors
BESB_008260
Complex B
BESB_008260
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
BESB_008260
Ribosome biogenesis [BR:
bbes03009
]
Eukaryotic type
90S particles
Helicases
BESB_008260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
AAA_16
Flavi_DEAD
ResIII
AAA_30
AAA_7
ABC_tran
T2SSE
ATPase
SRP54
Ploopntkinase3
NACHT
Cas3-like_C_2
TsaE
Microtub_bd
TrwB_AAD_bind
AAA_24
Motif
Other DBs
NCBI-GeneID:
40305888
NCBI-ProteinID:
XP_029222493
UniProt:
A0A2A9MMC9
LinkDB
All DBs
Position
I:complement(5841903..5845051)
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AA seq
798 aa
AA seq
DB search
MNAPAPKLDLGSKRALGATGFDEDPRGDCSRRRTGFSDAPTVSEQGLTRPSNFSYDGNAA
AVSGFSAAPGAPAGASVPVGFWGPNGEVPEGINPYTGAPYSQRYHKILEGRKKLPAWNAK
KNFLKLVKRNRTVILVGETGSGKTTQMTQFLIEAGFHEGKCVACTQPRRVAAMSVAQRVA
DEMDVELGKEVGYTIRFEDKSSPQTILKYMTDGMLLREAMADPLLERYSVVVLDEAHERT
LATDVLFGLLKEVCKNRPTLKMVVMSATLDARKFQQYFDDAPILNVPGRMHPVEIFYTPQ
PEKDYLEACIRTAIQIHISEPPGDMLIFLTGEEEIEQTKRELEKLAQRHSDAGELMVVPL
YSSLPPAMQQRIFEPAPGPKYEGGKPGRKCVVSTNIAETSITIDGIVYVIDPGFSKQKVY
NPRARVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAFEQELVDQTYPEILRSNL
GSVVITLKKLGIDDLVHFDFMDPPAPETLMRALEQLNYLGALDDEGELSQEGESMAEFPL
DPQLAKALVDSAKYECSKEMLSIAAMLSVPLTFLRPKDRSREADAAKARFSHLDGDHLTL
LNVFHAYIQHGGGSPDLERQFCFDNFLNPRSLASAKNVRTQLQRTMERLSIPLNSTPYTS
KEYYTNIRKALVAGYFMQVAHLQRSGHYLTVKDNQTVALHPSTVLDHKPEWVIYHEYVLT
SKNFIRTITQVRGDWLIELAPHFYNPDDFPECDAKKVLRKLIERQKRDKEGQKPGAQTNG
NAVKDPKAATGANPASNA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccagcccctaagctggacttggggtccaaacgcgcgctcggcgctacaggc
tttgatgaggaccctcgtggagactgctcccggcggcgcacaggtttctccgacgctccg
actgtctctgagcaggggttgacgagaccgtcaaacttttcctacgatggcaacgctgca
gccgtctcggggttctccgccgctccaggggccccggccggggcctctgtgcccgtgggt
ttctggggcccgaatggcgaagtgcctgaaggcatcaacccgtacactggcgcgccctac
tcgcagaggtatcacaagatcctggagggcaggaagaagctcccggcctggaacgccaag
aagaacttcttgaagcttgtcaagcgcaaccgcacagtcattctcgttggagaaaccggt
agtggtaaaaccacccagatgacgcagttcctcatcgaagctggattccatgaaggcaaa
tgcgtcgcatgcacgcagccgaggcgagtcgctgccatgagtgtcgcacagcgtgtcgcg
gacgaaatggatgtcgaactggggaaggaggtagggtatacgattcgtttcgaagacaag
agttctccgcagacgattttgaagtacatgaccgacggtatgcttctgcgcgaagccatg
gcagatccgctcttggagcgctacagcgtggtggtgcttgatgaagcgcacgagcgtaca
ttggcgacggacgtgttgtttggccttttgaaagaagtatgcaaaaaccgcccgacgctc
aagatggttgtgatgagtgcgacgctggacgcgcgcaagtttcagcagtactttgacgac
gcgccgattctcaacgtgccgggacgcatgcatcctgtcgagatcttttacactccgcag
ccggagaaggactacttggaggcgtgcatcaggacggcgattcagatccacatttcggag
ccgcctggcgacatgttgatcttcttgaccggagaggaggagattgagcagacgaagcgc
gagctcgagaagctggcgcagagacactccgacgcgggtgaactgatggtcgttcctctt
tactcgtcgctgccaccggcgatgcagcagcgcatcttcgagccggcgccaggacccaag
tacgagggcggcaagcctgggcggaagtgcgtggtgagcaccaacatcgcagagacctct
atcaccatcgacggcatcgtctacgtcatcgacccgggattctcgaagcaaaaagtatac
aatccgcgcgcgcgtgtggagtcgcttcttgtctcccctatctccaaggccagcgcacag
cagcgcgcaggacgtgccggacgaacgcggccaggcaagtgctttcggctctacaccgag
aaagcctttgaacaggagctagtcgaccagacctaccccgagatcctccgaagcaactta
ggcagcgtcgtcatcacactcaagaaactcggaatcgacgatctcgtccacttcgatttc
atggacccccccgcccccgaaaccctcatgagagctctggaacagctgaactacttgggg
gcgctggacgacgaaggcgagctttcccaggagggagagtcgatggctgagtttcctcta
gatccccagctggcgaaggcgctcgttgacagcgccaagtatgaatgcagtaaagagatg
ctgtcgattgccgccatgctttcggttcccctgacgtttctccggccgaaggatcgaagc
cgcgaagcggacgcggccaaggcgcggttttctcacctagacggcgaccacctgacgctg
ctgaacgtcttccacgcctacattcagcacgggggcggcagccccgatctcgagaggcag
ttctgttttgacaacttcctcaatccgcgatctctggcctccgccaagaacgtccgcacg
cagctgcagcgcacgatggagcggctgtcgattcccctcaacagcacgccgtacacgagc
aaggagtactacaccaacattcgaaaggcgttggttgcaggctacttcatgcaagtcgct
cacctgcagaggtctgggcactacctgactgtgaaagacaaccaaactgttgcgctgcat
ccctccacggtcctcgaccacaaacctgagtgggtcatctaccacgagtacgtgctcacg
agcaaaaacttcattcgaaccattacgcaagttcgcggcgactggctgatcgagctcgcg
ccgcacttctataaccctgacgacttccctgagtgtgacgcgaagaaagttttgcgcaag
ttgatcgagcggcagaagcgagacaaggaaggccagaaacccggcgcccagaccaacgga
aacgccgtcaaagaccccaaagcagctactggggcaaacccagcgtcaaatgcgtag
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