Besnoitia besnoiti: BESB_009540
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Entry
BESB_009540 CDS
T10139
Name
(RefSeq) pre-mRNA processing splicing factor PRP8
KO
K12856
pre-mRNA-processing factor 8
Organism
bbes Besnoitia besnoiti
Pathway
bbes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BESB_009540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbes03041
]
BESB_009540
Spliceosome [BR:
bbes03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
BESB_009540
Complex C
U5 SnRNP specific factors
BESB_009540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
40306016
NCBI-ProteinID:
XP_029222621
UniProt:
A0A2A9MQZ3
LinkDB
All DBs
Position
I:complement(<6772308..>6784711)
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AA seq
2572 aa
AA seq
DB search
MLPNGQGGGFRPPPHPPGGLGGPHGPPPGMPHPPVSHMRQGLPVPPPPGFPVGVPGALGP
PSSPPPHAAGLFAPPHQQCPPPAGAPGHSQRLPPGGAMFMPPPGFAGFSQPNARSPHPHN
MSPPHAQAHPGRGRPHGSGPRAHGVSPSGAVGGPGGGPSHPNGAGKPFYGADLRKLDASG
PGSFGGAPSGGSAGKAGQFSRKGENGYSHHGLPGANPPAVFSRYPPPLPGLQPTTSQAPG
AGAGGGAPREARPKVKSAEELLAEKARKWQQLNTKRYGEKSKLVGGGHDTTKEEMPPEHL
RKLIKDHGDMTSKKFRHDKRVYLGALKYVPHAVYKLLENMPMPWEQVRNVAVLYHITGAI
TFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYGDNVLDVE
PLEAIQMQLDEEEDAPVMDWLYDSKPLQHDKRYISGPSYRQWRLEIRQLSVLYRLANQLV
SDLQDKNYFYLFNLESFYTAKALNMAIPGGPKFEPLFRDLHEEDEDWNEFNDINKIIIRQ
QIRTEYKIAFPYLYNNRPRKVAVAVYREPTCSFVKPEDPELPAFYYDAIVNPLPAYKSGS
STTAQQDMSMFDDFVLPREIQPLLQDAPLSTDTTVDGIMLYWACRPFNLRSGRTRRSIDV
PLVQSWYREHVPTNYPVKVRVSYQKLLKCWVLNHLHQRPPKSLKKRYLFRVFKGTKFFQC
TELDWVEVGLQVARQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAF
HLCREILRLTKLVVDSHVQYRLGNVDAFQLADGLQYTFAHVGQLTGMYRYKYRLMRQVRM
CKDLKHLVYYRFNTGPVGKGPGCGFWAPVWRVWLFFLRGVLPLLERWLGNLLARQFEGRV
SKGVAKTVTKQRVESHFDLELRAAVMHDILDTMPEGVKANKARTILQHLSEAWRCWKANI
PWKVPGLPAPVENMILRYVKMKADWWTNAAYYNRERIRRGATVDKTVCKKNLGRLTRLWL
KAEQERQHAYLKDGPYITGEEAVAIYTTAVHWLESRKFTHIPFPPLNYKHDTKLLILALE
RLKELYSVKSRLNQLQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKELTLEFMDLYSH
LVPIYEVDPLEKITDAYLDQYLWYEADSRHLFPNWVKPADSEPPPLLVYKFCQGINNLTD
VWKTSDGEAVVLLETKYEKVYEKIDLTLLNRLLRLIVDHNIADYITAKNNVNISFKDMNH
INSFGLIRGLQFASFVFQYYGLILDLLVLGLTRATELAGPPNLPNDFLTFTDVETETRHP
IRLFCRYIDRFWIVFRFEKEEARDLVQRYLTENPDPNNENIVGYNNKSCWPRDCRMRRMK
HDVNLGRAVFWEIENRLPRSVCTLEWSNSFASVYSKDNPNLLFAMCGFEVRILPKIRTYT
EEFSQREGVWKLQNEVTKEMAAQAFLKVGDEGMKRFENRVRQILMASGATTFTKIANKWN
TTLISLMTYFREAVIHTEALLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGG
LGMLSMGHILIPQSDLRYSKQTETGITHFRSGMSHEEDQLIPNLYRYIQTWESEFIESQR
VWAEYALKRSEAAAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRQDFKQ
YQQMKAHPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWE
KASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHG
KIPTLKISLIQIMRAHLWQKVHESIVMDLCQVFDLELDSLEIEMVQKETIHPRKSYKMNS
SCADILLFAAYKWQVSKPSLLADGKDVMDGTTTSKYWLDIQLRWGDFDSHDIERYCRSKF
LDYTTDNMSIYPSPTGVLMGVDLAYNLHSGFGNWFPGLKPLMQRAMNKIMKSNPALYVLR
ERIRKGLQLYSSEPTEPYLTSQNYGELFSNQTIWFVDDTNVYRVTIHKTFEGNLTTKPVN
GAIFIFNPRTGQLFLKIIHTSVWAGQKRLTQLAKWKTAEEVAALIRSLPVEEQPKQLIAT
RKGMLDPLEVHLLDFPNIVIKGSELNLPFQAIMKVEKFGDMILKATQPEMVLFNMYDDWL
KSISSYTAFSRLLLLLRAMHVNTESTKVILKPNKTTVTQSHHIWPSLTDEEWIHVEVALK
DLILADYGKKNNVNVASLTQSEIRDIILGMEISPPSIQRQQIAEIETQTKDISQVTATTT
RSVNAHGDEIIVSTQSPHEQQVFSSKTDWRIRAISAASLHLRTHHIYVNSDDIKESGYTY
VFPKNLLKKFICVADLRTQIAAYLYGVSPPDNEHVKEVRAMVFVPQVGSHQSVSLPQALP
EHSYLQDLEPIGWIHTQPNENPQLSPQDVTAHAKILNENKAWDAATTVIITCSFTPGSCS
LTAYKLTPQGYQWGKSNKDNGPNPSGYLPTHYEKVQMLLSDVFLGFFMVPEGGLWNYNFM
GVKHSPSMKYNLVLDAPKEFYHEQHRPSHYLQFTQMETATEAVGADREDLFA
NT seq
7719 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctaacggccaagggggcggcttccggcccccgccacatccacctggggggctc
ggtggcccccacgggcctccgccagggatgccacacccgccggtgtcccacatgcggcag
ggccttccggtgccgccgccgccaggctttccggtaggcgtgcctggggctcttggcccg
ccgtcttcgcccccgccgcacgccgcgggcctgttcgccccgcctcaccagcaatgcccg
ccgccggccggcgcgcctgggcattcgcagcgcctgccgcctggcggtgcgatgttcatg
cctccacctggctttgcgggcttttcgcagccgaatgcgcggagcccacacccgcacaac
atgagcccgccgcacgcgcaggcgcatccggggcgtggcaggccgcacggctcgggtccg
agggcccacggggtgtctccgtcgggagcggtgggcggtccggggggcgggccttcgcac
ccgaacggcgcaggaaagccgttctacggcgcagatcttcgcaagctggacgcgtctggc
ccgggctcctttggaggagcgccctccggagggtcagctggcaaggcagggcagttctct
agaaaaggcgagaacggctacagccaccacggtctgccgggcgcgaacccgccggctgtg
ttttcgcgctatccgccgccgctcccggggctgcagccgacgacgagccaagcgcctggc
gcgggcgcgggcggcggcgcgccgcgggaggcgcggccgaaggtgaagtcggcggaggaa
ctcttggcggagaaggcgcgcaagtggcagcagttgaacacgaagcgctacggcgagaag
tcgaagctagtgggggggggccacgacacgaccaaagaggagatgcctccggaacatctg
cggaagctgatcaaagatcacggagacatgactagcaagaagttccgccacgacaaacgc
gtgtacctgggcgcgctcaagtacgtgccgcatgcagtctacaagttgctggagaacatg
ccgatgccttgggagcaggtgcgcaacgtcgcggttctgtaccacatcactggcgccatc
accttcgtgaacgagattccctgggtcgtcgagccgatctacctcgcgcagtggggcacg
atgtggatcatgatgcgccgcgagaagcgcgaccgccggcacttcaagcgcatgcgcttc
ccgccctttgacgacgaagagccgccgctggactacggcgacaacgtcctcgacgtcgag
ccgctggaggctatccagatgcagctcgacgaagaagaggacgcgcctgtgatggactgg
ctgtatgactccaagccgctgcagcatgacaagcgctacatctcagggccctcgtatcgc
cagtggcgactggagatcaggcagctgagtgtgttgtaccgcctggcaaaccagctcgtg
tctgacctgcaggacaagaactacttctacctcttcaacctggagagcttctacactgct
aaggcgctgaacatggcgattcccggcggtcccaagttcgagccgctcttcagagacctg
cacgaagaagacgaagactggaacgagttcaacgacatcaacaaaatcatcattcgccag
caaatccgaaccgaatacaagatcgccttcccgtacctctacaacaaccgcccgcgaaaa
gtcgccgtggccgtgtacagagaacccacctgttccttcgtcaaacccgaagaccccgag
ctgcctgctttctactacgatgctatcgttaatcctctccccgcctacaaaagcggttcc
tccactactgcgcagcaagatatgtcgatgtttgacgactttgtgctcccgcgggagatc
cagccactgctccaggacgcgccgctgtcgacagacaccacggtcgacggcatcatgttg
tactgggcctgccgcccgttcaacctacgctcgggacgcacgcggcgcagcatcgacgtg
cctctcgtgcagtcttggtatcgcgagcacgtcccgacgaactacccggtgaaggtgcgc
gtctcgtatcagaagctgctcaagtgctgggtgttgaatcacttgcaccagcggccgccc
aagtcgctcaagaagcgctacctcttccgcgtcttcaagggaaccaagttcttccagtgc
accgagctggactgggtcgaggtcggtctgcaggtcgcccgccagggctacaacatgctc
aatttgctcatccaccgcaagaatctaaactacctccacctcgactacaacttcaacctg
aaaccggtgaaaacactgacgaccaaggaacgcaaaaagagtagattcggaaacgccttc
cacctgtgcagagaaatcctccgcctcaccaaactcgttgtcgactcccacgtacagtat
cgtctggggaacgtggacgcgtttcagttggcggacggtctgcagtacacgtttgcgcac
gtgggtcagctgacgggcatgtatcgctacaagtaccgtctgatgcggcaggttcgcatg
tgcaaggatttgaagcacctggtgtattaccgcttcaacaccggccctgtcgggaagggc
cccgggtgcggcttctgggcgccagtgtggcgcgtgtggctgtttttcctgcgcggtgtt
ttgccgctgctggagcgctggctgggcaacttgctggcgcgtcagttcgagggacgcgtc
tcgaagggcgttgcgaagacagtcaccaagcagcgcgtcgagagtcacttcgatctggag
ctccgcgccgccgtcatgcatgacattctggatacgatgccggagggcgtcaaggcaaac
aaggcgcgcacgattctgcagcaccttagcgaggcctggcgctgctggaaggcgaacatc
ccctggaaggtcccagggctcccggcgccagtcgagaacatgattttgcgctacgtcaag
atgaaggcagactggtggacgaacgccgcgtactacaaccgcgagcgcatccgcagaggc
gcgacggtcgataaaacagtctgcaagaagaacttggggcgcctcacgcggctgtggctg
aaagctgagcaggagcgccagcacgcgtacctgaaagacggcccctacatcactggtgaa
gaggccgtcgccatctacacgaccgcagtccactggctagagagcaggaagttcacgcac
attcccttcccgccgctgaactataagcacgacacgaagctgctcatcctcgcgctcgag
cggctgaaagagctgtactcggtcaagtcaaggctgaaccagctgcagcgcgaagagctc
ggcttgattgagcaggcctacgacaacccgcacgaggcgctctcgcgcatcaagcgccat
ttgctcacgcagcgcgcgttcaaggaacttacgctcgagttcatggacctttacagccac
ctcgtcccgatttacgaagtggatccactcgagaaaatcaccgacgcctaccttgaccag
tacctctggtacgaggccgactcacgacacctcttccccaactgggtgaaacccgcagac
tccgaaccgccgcccctcctcgtctacaaattctgccaaggcatcaacaacctcacagac
gtctggaagaccagcgacggagaagccgttgtccttctcgaaactaaatacgaaaaggtg
tacgagaagatcgacttgacgttgctgaatcgtctgctgcgtctcatcgtggatcacaac
atcgcggactacatcacagcgaagaacaacgtgaacatcagcttcaaagacatgaaccac
atcaactcgttcgggttgattcgcgggctccaattcgcctccttcgtcttccagtactac
ggcctgattctcgatcttctggtgcttggtctcacgcgcgccactgagctggcagggccg
ccgaacttgccaaacgacttcctcaccttcacggacgtggagaccgaaacccgccacccg
attcgccttttctgccgctacatcgatcgcttctggatcgtcttccgctttgaaaaggag
gaagctcgcgacctcgtccagcgctacctgactgaaaaccctgaccccaacaacgaaaac
atcgttggctacaacaacaagagctgctggccgcgagactgccgcatgcgaaggatgaag
cacgacgttaacctgggtcgcgcggtcttctgggagatcgagaatcgtttgccgcgcagt
gtctgcacgttggagtggagcaactcgtttgcgtcggtgtactcgaaggacaacccaaac
ttgctgtttgcgatgtgcggcttcgaagtgcgtattctgcccaagatccgcacgtatacc
gaggaattttctcagcgcgagggcgtgtggaagctgcagaacgaagtgacgaaggagatg
gccgcgcaggcgttcctgaaggttggtgacgagggcatgaagcgcttcgaaaaccgcgtg
cgacagatccttatggcgagtggcgcgacgacgttcaccaagatcgcaaacaaatggaac
acgacgctgatctcactcatgacctacttccgcgaagcggtcatccacactgaggcgctg
ctcgacttgctagtcaagtgcgaaaacaagattcagactcgtatcaagatcggcctgaac
tcaaaaatgccttcccgtttcccccccgtcgtgttctacacccctaaagaactcggcggc
ctcggcatgctctccatgggacacatcctcattccgcagagcgacctccgctactcaaag
caaaccgaaacaggcatcacgcacttccgcagcggcatgagtcacgaggaagaccagctc
atccccaacttgtatcgatatatccagacctgggagtcggagttcattgagtcgcaacgc
gtgtgggcggagtatgcgttgaagcgcagcgaagcggctgcgcagaatcggcgcttgacg
ctggaggatctcgaggactcgtgggatcgcggtattccgcgcatcaacacgctgttccag
aaggacagacacacactcgcttacgacaaaggctggcgcgtgcggcaggacttcaagcag
tatcagcagatgaaggcgcaccccttttggtggactcaccaacgccacgacggcaagctg
tggaacttgaacaactaccgcacagatatgattcaggcgctcggaggtgtcgaaggcatt
cttgagcacacgctcttcaaaggcacctattttcccacgtgggaaggtctcttttgggaa
aaagcttcaggtttcgaagagagcatgaagtacaagaagcttaccaacgcccagcgttcg
ggtctgaatcagattccgaatcgtcgcttcactctctggtggtcacccacgatcaacaga
gcgaatgtgtatgtcggtttccaggtccaactggatttgactggtatcttcatgcacggc
aagatcccgacgctgaagatttcgctgattcaaattatgcgagcgcacttgtggcagaaa
gtccacgagtcaatcgtcatggatctttgccaggtgtttgatttggagttggattctctg
gaaattgagatggtgcagaaggagacgattcacccgcgcaagtcttacaagatgaactcg
tcgtgtgcggatattcttcttttcgctgcatacaagtggcaagtttccaagccttctctg
ttggctgacggaaaggacgttatggacggcaccaccacctcgaagtactggctcgacatt
cagctgcgttggggcgacttcgacagccacgatattgagcgatactgccgcagcaagttc
ctcgactacacgacagacaacatgtccatctacccctctccgaccggtgtgcttatgggt
gtcgacctcgcctacaaccttcactctggcttcggaaactggttcccaggtctgaagcct
ctcatgcagcgcgccatgaacaaaatcatgaagtcgaacccggcgctgtacgtgctgcgc
gagcgcatcaggaagggtctgcagctgtactcctcggagccgacggagccttacttgacc
tcgcagaactacggcgagctgttcagcaaccagacgatttggttcgtagacgacacgaac
gtgtaccgcgtcacaattcacaagacgttcgaaggcaacttgaccaccaaacccgtcaac
ggcgcgatcttcatcttcaacccgcgaacgggtcagctgttcctgaagattattcacacg
tcggtgtgggcgggtcagaagcgtttaacgcagctggccaagtggaagacggccgaggaa
gttgctgcgttgattcgttcgctgccggttgaggagcagccgaagcagttgattgcgacg
cgcaagggcatgttggatcctctggaggtgcatttgttggatttcccgaacattgtgatc
aaaggcagcgagctgaatctgccgtttcaggcgatcatgaaggtggagaagttcggcgac
atgattctgaaggccacgcagcccgagatggtgctgttcaacatgtacgatgactggctc
aagtcgatctcgtcctacacggccttctcgcgcctgctgctgcttctccgcgcgatgcat
gtgaacacggagagcaccaaggtgattctgaagccgaacaagacgacggtcacgcagagt
caccacatctggccgagtctgactgacgaggagtggattcacgtcgaagtcgcgctgaag
gacttgattctcgccgactacggcaagaagaacaacgtgaacgtcgcctcgctgacgcag
agcgaaatccgggacatcattctcggaatggagatctcgccgccgtcgattcagcgccag
cagatcgccgaaatcgagacgcagacgaaggacatcagccaggtcaccgcgacgacgacg
cgcagcgtcaacgcacacggcgacgaaatcatcgtctccacgcagtctccgcacgagcag
caagtcttcagctccaagaccgactggcgcatccgcgcgatctccgcggcctcgctgcac
ctgcgcacgcaccacatctacgtcaactcggacgacatcaaggagtcgggctacacgtac
gttttcccgaagaacctgctcaaaaagttcatctgcgtcgcagacctccgcacgcagatc
gcggcctacctttacggcgtctcgccccccgacaacgaacacgtcaaggaagtccgcgcc
atggtcttcgtgccccaggtcgggagccaccagagcgtctcgctgccgcaggcgctgcct
gagcacagctacttgcaggacctcgagccgattggctggattcacacgcagccgaacgaa
aacccgcagctctccccgcaggacgtcaccgcccacgccaagatcctcaacgaaaacaag
gcctgggacgccgccaccaccgtcatcatcacctgctccttcacgccgggcagctgctcg
ctcaccgcctacaaactcacgccccagggctaccaatggggcaaatccaacaaggacaac
ggcccaaacccctcgggatacctgccgacgcactacgagaaggtgcaaatgctgctcagc
gacgttttcctcggcttcttcatggtccccgaaggtggcctgtggaactacaactttatg
ggcgtcaagcactcgccctcgatgaagtacaacctcgtgctcgacgcaccgaaggaattt
taccacgagcagcacagaccctcgcattacctgcagttcacgcagatggagacggccacc
gaggcagtgggcgcagatcgcgaggatctcttcgcctag
DBGET
integrated database retrieval system
