KEGG   Besnoitia besnoiti: BESB_009960
Entry
BESB_009960       CDS       T10139                                 
Name
(RefSeq) DNA-directed RNA polymerase II RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
bbes  Besnoitia besnoiti
Pathway
bbes03020  RNA polymerase
bbes03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bbes00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BESB_009960
  09124 Replication and repair
   03420 Nucleotide excision repair
    BESB_009960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbes03021]
    BESB_009960
   03400 DNA repair and recombination proteins [BR:bbes03400]
    BESB_009960
Transcription machinery [BR:bbes03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     BESB_009960
DNA repair and recombination proteins [BR:bbes03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      BESB_009960
SSDB
Motif
Pfam: RNA_pol_Rpb4 DUF6816 DUF3839 LAMB1
Other DBs
NCBI-GeneID: 40306058
NCBI-ProteinID: XP_029222663
UniProt: A0A2A9MMQ0
LinkDB
Position
I:complement(7090778..7092177)
AA seq 130 aa
MERKIDCQFMGLGPEFRSAKCLNLCELQLILSDQLRLPNTRSAEAQSLLKASYDYSTRFA
KLRTRNVIVDLRSNLEREGDLHQYEIAQLVDLLPKSPDEAKALIPTLNRLPAPRLQRILD
LLEMFRVHAA
NT seq 393 nt   +upstreamnt  +downstreamnt
atggagcgcaaaatcgactgccagtttatgggactgggcccagagttccgctcggcgaaa
tgtctaaacttatgcgagctgcagttgatcctcagtgatcagctacgtctgccaaacacc
cgatccgctgaggcgcaaagcttgcttaaggcctcgtacgactatagtacgcgtttcgcg
aagctgaggacacgcaatgtcattgtggatcttcgaagtaaccttgagcgcgaaggagat
ctccaccagtacgagatcgcgcagctggtggacctgctccccaaatccccagacgaagca
aaagcactaattccgacgctcaaccgtttgcccgccccgcggcttcaacgcatcctcgat
cttcttgaaatgttccgcgtgcacgcagcttga

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