Besnoitia besnoiti: BESB_010220
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Entry
BESB_010220 CDS
T10139
Name
(RefSeq) 3' exoribonuclease family, domain 1 domain-containing protein
KO
K11600
exosome complex component RRP41
Organism
bbes Besnoitia besnoiti
Pathway
bbes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BESB_010220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbes03019
]
BESB_010220
Messenger RNA biogenesis [BR:
bbes03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
BESB_010220
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
BESB_010220
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
40306084
NCBI-ProteinID:
XP_029222689
UniProt:
A0A2A9MQZ7
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Position
I:complement(7259903..7262805)
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AA seq
352 aa
AA seq
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MASRAWSHEPSSSPSSAMFPSFAFLRADGRRPAELRELHFSTCVPSQLTSLSHVASSPAR
QASSSSAAAASQKEAGGAGDAGSSASPFFSAPTGQHADGRSLVSFGSTKVAAFVFGPRPL
SSGAHAGRSRPFTSAGGGGWSEGGLLDDGLDGGGEGGLLGAGAAGGSEKASILCRVGIAA
FSGDWRADVARTGGAAEEHEVALSVRKVVEGVVMADAYPRSLICLFVHVVENDGGILAAS
ICAASLALIDAGIATKDFVAAMSCVYMPRQLTPLLDPPRAELQTGAPTLTVAMLISSEEV
SLLQLDGQVPMDVFEQMYQACAAGCREVGEAMKATVCEAAALRVRFGDRVLK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcgggcgtggtcgcatgagccctcgtcctcgccttcttcggcgatgtttccc
tcttttgcgtttttgcgcgccgacggtcgccgcccggcggagctgcgcgagctgcatttc
tcgacgtgcgtgccgtcgcagcttacttcgctctcacacgtcgcgtcctcccccgcgcgg
caagcctcctcttcgtccgcggcggccgcttcgcagaaggaagcgggtggcgccggcgac
gctggcagcagcgcctcgccgtttttctccgccccgactggacagcacgcagacgggcgg
agcctcgtgtctttcggcagcacgaaagtggcggcgtttgtcttcggaccgcggccgctc
tcctctggagcgcacgcagggcggagccggcccttcacctctgccggcggcgggggctgg
agcgagggcggcctcctcgacgacgggctcgacggaggcggcgagggcgggctgctcggc
gcaggcgcggccggcggaagcgagaaagcttccattctgtgccgcgtcgggatcgctgcc
ttcagtggagactggcgggccgacgtggcgcggactggcggggctgccgaagagcacgaa
gtcgctctcagcgtgcgcaaagtcgtcgaaggcgtcgtcatggccgacgcctacccgcgc
tcgctgatctgcctcttcgtgcatgtcgtcgagaacgatggaggaattctggctgcctcc
atctgcgctgccagtctcgccctcatcgacgcaggtattgcgacgaaggacttcgtggcc
gccatgtcgtgtgtttacatgccccgacagttaactcctctgctggatccgccgcgcgca
gagctacagaccggagctccgacgctgactgtggcgatgctgatttcctcagaagaagtg
tctctcctccaactcgacggtcaggttcccatggatgtcttcgaacagatgtatcaggcg
tgcgcagccgggtgccgagaagtcggggaagcgatgaaggcaacggtgtgcgaagcggcg
gcacttcgggttcgcttcggtgaccgtgtccttaagtga
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