Besnoitia besnoiti: BESB_010310
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Entry
BESB_010310 CDS
T10139
Name
(RefSeq) putative splicing factor 3b, subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
bbes Besnoitia besnoiti
Pathway
bbes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BESB_010310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbes03021
]
BESB_010310
03041 Spliceosome [BR:
bbes03041
]
BESB_010310
03036 Chromosome and associated proteins [BR:
bbes03036
]
BESB_010310
Transcription machinery [BR:
bbes03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
BESB_010310
Spliceosome [BR:
bbes03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
BESB_010310
Complex B
BESB_010310
Complex C
U2 SnRNP specific factors
BESB_010310
Chromosome and associated proteins [BR:
bbes03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
BESB_010310
TFTC complex
BESB_010310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
40306093
NCBI-ProteinID:
XP_029222698
UniProt:
A0A2A9ML43
LinkDB
All DBs
Position
I:7314688..7323396
Genome browser
AA seq
1236 aa
AA seq
DB search
MPVLYHLTLQKPTAIVHALQGNFSAPRAQEVVVSRGRILELLRPDDQGKLQAIASTEVFG
IIRSIAAFRLTGANRDYLAVGSDSGRLVIVQFSAEKNEFERVHCETYGKTGVRRVVPGEY
LAVDPKGRSLMVAAVERQKFVYIVNRDNKAQLTISSPLEAHKSHAICHDLCGIDMSFDNP
LFASLEQNVEATDKKPATPGVTVPKGVCLWEMDLGLNHVIKKATLPVPPSAHCLIPVPGG
GGADGPSGVLVCCGNFLLYKKPDHEEISCAIPRRLETGSDRGLVVVAFAVHRMKDFFFIL
IQTEYGDIYKVEISHEEGVVREIVCRYFDTVPVANALCVLKSGYLFVASEFGNHLFYQFT
GIGSDASDPRCSSTHPLGREAIIAFKPRPLKNLALVDELPSLSPITDLKVLDAQGTGAPQ
VYALCGKGPRSSLRILQHGLGVEEMADNELPGRARAVWTTKLSHESAFDGYIIVAFEGSS
LVLQIGDTVEEVTDSLFLTNVSSLLVALMYDDSFIQVHETGIRHILKSKRINEWRAPGGR
RIKAADANDRQLVISLSGGELVLFEVDDAHTLVETARRNINVETTCMSIQATPKGRLRAS
FLAVGGLDNMVRILSLEKDRNLRQLATQLLPNNATPESVCLVTLTGLGTSNTEKGKTNDD
AGILYLHVGLNTGIMIRSVVDPVLGTLLDQRSRFLGGRAVRFHAVTLGGQPAILALSEKS
WLCYTFQHKLHCTPLNYDPLECVASFSSEQCVDGFVAIAGGSLRIFRCQRLGETFSQTVL
PLSFTPRAMTALPHLPATEPHDTLNPAAGDVEPARRTAALAIVEADHNAYDESTKAEIRR
ALKGIKVNQEEEEEKEETDDMQLEEKEQQDLPEDLYGTFKAGEGKWGSCIRIVNPLMATT
MDKVALETDEAALSCCYCEMEGLPLLIVGTVTAMTLHPRKVPQASIKVFSYDERFTLNLL
HSTAVEDYPMALAPFRGMLLAGVGPKLRLYALGKKRLLKKCEYKNLPCGVAFIRVAGDRI
FVGDLRESVHVMRYRLSENLFYVLADDVIPRWLTKGEVLDYHTFVAADKFDSIFICRVPS
EAKQEELGDATGLRLRGDTTYLTDKCFKLQNVLQFHIGETVTALERATLTSGASECVVYG
TVMGAIGSFCPFLTKHEMDLFTHLEMVLRTEKPPLGGREHIMFRSYYHPVKNTVDGDLCE
SYALLPADVQKRIAQDFEKTPAEILKHLEDIRNRIL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcctctaccacctcacactgcagaagccgacggcgatcgtccacgcgctgcaa
ggcaacttcagcgcgccgcgagcgcaggaagtcgtcgtctctcgcgggcgcatcctggag
ctgttgcgcccagatgaccaaggcaagctgcaggcgatcgccagcaccgaggtctttggc
atcatccgctccatcgccgccttccgactcaccggcgccaaccgcgactatctcgccgta
ggcagcgacagcggccgcctcgtcatcgtacagttctccgcggagaagaatgaattcgaa
cgtgttcactgcgagacctatggaaaaaccggtgtccggcgcgtggtgccgggtgagtac
ctggcggtggaccccaagggccgctcgctaatggtcgcggccgtcgagcggcagaagttt
gtctacatcgtgaaccgcgacaacaaggcgcagctgacgatcagcagcccactggaggct
cacaagagccatgcgatctgccacgatttgtgcggcatcgacatgagctttgacaatccg
ctcttcgcctcgctggagcagaacgtcgaggccaccgacaagaaacccgcgacgccaggc
gtcacagtgccgaagggcgtgtgtctgtgggagatggaccttgggttgaaccacgtgatc
aagaaggcgacgcttcctgtgccgccttcggcgcactgtttgattccggtgccgggaggc
ggcggcgcggacggtccgagcggcgtgttggtgtgctgcggcaactttttgctctacaag
aagcctgaccacgaggagatttcgtgtgcgattccgcggcgtctggagacggggtcggac
cgcggcttggtcgtggtggcgtttgcggtgcatcgcatgaaggacttttttttcattttg
attcagacggagtacggcgacatctacaaagtcgagatttcgcacgaggagggcgtagtg
cgcgagatcgtctgtcggtactttgacaccgtgcccgtggcgaatgcgctttgcgtgctc
aagtcggggtacttgtttgtcgcctcggagtttggaaaccacctgttctaccagttcacc
ggcatcgggtcggacgcctcggatccgcgctgctcgtcgactcacccgctgggacgcgag
gcgatcatcgccttcaagccgcgaccgctgaaaaacctcgcgctggtcgatgagctgcct
tcgctctcgcccattaccgacctgaaggtgctcgacgcgcagggcaccggcgcgccgcaa
gtctacgctctctgcggcaagggcccccgcagctcactccgcattttgcagcacggcctt
ggcgtcgaggagatggcagacaacgagctccccggccgcgcgcgggctgtctggacgacg
aagctctcgcacgagagcgcctttgacggatacattatcgtcgccttcgagggcagcagc
ttggtgctgcagatcggcgacacggttgaggaggtgaccgattcgctcttcttgactaac
gtctcgtcgctgctcgtcgcgctcatgtatgacgactccttcatccaagttcacgagacc
ggcatccgccacatcctcaagagcaaacggatcaacgagtggcgcgcgccaggcgggcgg
cgcatcaaagccgccgacgccaacgaccgccagctcgtcatctcgctgtcgggcggcgaa
ctcgttctcttcgaagtcgacgacgcacacaccctcgtcgagactgcgcgcagaaacatc
aacgtcgagacgacctgcatgagcatccaggcgacgcctaagggacgcctccgcgcctcc
ttcctcgccgtcggcggcttggacaacatggtacgcatcctcagcctcgaaaaagaccga
aacctgcgccaactcgcgacccagcttctgcccaacaacgccactcccgagagcgtctgc
ctcgtcacactcaccggccttggaacgagcaacactgaaaaaggcaaaacaaacgacgac
gctggcatcctctacctacacgtcggcttaaacacgggtatcatgattcgcagcgtcgtc
gatcccgttcttggaacacttctcgaccagaggagccgattcctgggaggccgcgcagtg
cgcttccatgccgtgactcttggaggccagccggcaatcctggcgctcagcgagaaatcc
tggctctgctacactttccaacacaagcttcactgcacaccgctgaactacgacccgctc
gagtgcgtcgcttccttctcctctgaacagtgcgttgacggtttcgtcgcgattgccggc
ggcagtctgcgaatcttcaggtgccagaggcttggggagaccttcagtcagacggtgttg
ccgctttccttcacgccccgcgcgatgaccgctcttcctcatctccctgcaaccgagccc
cacgacacactgaacccggcggcgggcgacgtggagcctgcgcggcgaacggcagcgctg
gcgatcgtcgaggcagatcacaacgcatacgacgaatcgacgaaggcggagattcgcagg
gcgctcaaggggatcaaagtcaaccaggaggaggaagaagaaaaggaggaaaccgacgac
atgcagcttgaggaaaaggagcaacaagatctgccggaggacctctacggaaccttcaaa
gccggggagggcaaatggggatcctgcatccgcatcgtcaatcctctcatggcgaccacg
atggacaaggtcgcgctggagaccgacgaggccgcgctcagctgctgctactgcgagatg
gagggcctgccgctgctcatcgtcgggacggtcactgcgatgacgctgcaccccagaaaa
gtgcctcaggcgtccatcaaagtgttttcctacgacgagaggtttaccctcaatcttctt
cactcgactgctgttgaggactacccgatggcgctcgcgccgttccgcggcatgctcctg
gcgggcgtcggccccaagctccgcctgtacgccctgggcaagaagcggctgctgaagaaa
tgtgaatacaagaacctgccttgtggcgtggcgttcatccgtgtcgcgggcgacagaatt
ttcgtcggagacttgcgcgaaagcgtccacgtgatgcggtaccgcctcagcgaaaatctt
ttctacgtcttggcggacgatgtgattccgaggtggctgacgaagggcgaagtgctggac
taccatacctttgttgccgcagacaaattcgactccatcttcatctgccgcgtgccgagc
gaggcgaagcaggaggagcttggagacgccacggggctgcgcctgcgaggagacactacg
tatctgacagacaagtgcttcaaacttcaaaacgtgcttcagttccacatcggcgaaacc
gtgaccgccctcgagcgcgcgacgctcacgtcaggggcctcggagtgcgtcgtgtacggc
actgtcatgggcgcgatcggctctttctgtcccttcctaaccaaacatgagatggattta
ttcacgcatctcgagatggtgttgcgcacggagaagcctccgctaggcggccgcgagcac
atcatgttccgttcgtactaccacccggtgaagaacacggtcgacggcgacctgtgcgag
agctacgcgctgctgcccgccgacgtgcagaagagaatcgcccaggatttcgaaaaaacc
cccgcagagatcctgaagcacctcgaagatattcgaaaccgcattctctag
DBGET
integrated database retrieval system
