Besnoitia besnoiti: BESB_017540
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Entry
BESB_017540 CDS
T10139
Name
(RefSeq) XPA binding protein 2 family protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
bbes Besnoitia besnoiti
Pathway
bbes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BESB_017540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbes03019
]
BESB_017540
03041 Spliceosome [BR:
bbes03041
]
BESB_017540
Messenger RNA biogenesis [BR:
bbes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
BESB_017540
Spliceosome [BR:
bbes03041
]
Complex B
Other components
Prp19-related factors
BESB_017540
Complex C
BESB_017540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
TPR_12
TPR_1
TPR_15
HSP90
TPR_16
TPR_2
TPR_8
Motif
Other DBs
NCBI-GeneID:
40306815
NCBI-ProteinID:
XP_029216445
UniProt:
A0A2A9M955
LinkDB
All DBs
Position
X:1402893..1410166
Genome browser
AA seq
995 aa
AA seq
DB search
MPPAAATGSEEGASPLAPPSEAAPSGDAGKEGLSFFPGEDDVLNVVTKETDIVYEQELQR
DVFQVKVWVSYLNSKKDSPPYTRFILYERALRGLPGSYKLWFAYLKERVAALASRCPVES
SSLFAETNIVFERALVHLSRMPKIWLLYVEFLRKQKCITQTRRAFDRALQSLAITQHDRI
WEHYLDFVKEAGVVETTIRVYRRCVMLLPEKVEDFIAFLQSPEVARYDEAACLLAEVVND
ESCPTTKTRHQLWLDLCDLVCAHPREIKGLRAEAVLRSGIARFSDQVGKLWCSLASHFLR
LGQLEKARDIYEEALRGVRTLHDLALVYDAFVNFEETLLAAKMQEMEQAETEEAREKDAR
RAKKGAGGGSGEGRDAEGDQEEEAHRKQRRREQKKEREDEIDFLMTRLEHLTERRPILVS
SCKLRQNPHNVHEWLARVDLFKGDTNKQVETFSEAVATVDPQQAVGRVSVLWIAFARYYE
DRGDLPSARLIFEKATNAALRTVDELASIWCEAVEMELRHEERQRALELVRRAINKPRDA
EPDSAQAKLFRSVKLWSLAADVEEMVGTPETVRLCYDKMFQLKVITPQLVTNYAHFLEEH
RFFEESFKVYERGIAAFCWPHLNDLWLMYLTKFVSRYGSSKLERARELFQQATSSVPPQY
AKRLFLLYAKLEEEFGLAKHALTIYQAATKAVTQAEKLDMYLIYIARTTELLGIARTRKI
YEEAIENLPEKDARDMCLRYAAVEKGLGEVDRCRAIYEHCSQLCDPTRDPEFWKSWKEFE
VSHGNEDTFKDMLRIKRSVQAQYSQAHLNVTELAQTDLSESPLNPLAAAEKQLKEEEEAR
KKLEMREKALEEQLYLKKKKETDDAELAQAEEEFRRVQDLRARARMLASLPPDAPFFVSL
SSFQGARPGYLFHRGSQGMGYYLDERQVGADFVSEREKAFVTEAREGGGRRREREEASGG
EPGGEEVGINLEEYVPGEVLGRLASEAKKMRTKKE
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctgccgccgcgacaggctctgaggagggtgcgtcgccgctggcgccgccgtcc
gaggctgcgcccagcggcgacgcggggaaggagggtctgagcttctttcccggagaggac
gacgtgctcaacgtcgttacgaaggaaacagacatcgtgtacgagcaagagcttcagcgc
gacgtctttcaggtcaaagtctgggtcagctacctgaactccaaaaaagactcgccgccc
tacaccaggttcattctgtacgagcgcgccctgcgcggcctgccggggagttacaagctt
tggttcgcgtacctgaaagagcgcgtggcggcgctcgcctcgcgctgtccggtggagagt
tcgtcgcttttcgcggagacaaacatcgttttcgagcgtgcgctggtgcacctgagccgc
atgcccaaaatctggctgctttacgtcgagttcctgcggaaacagaagtgcataacgcag
acgcgccgcgccttcgaccgcgccctccagagcctcgccatcacccagcatgaccgcatc
tgggaacactacctggacttcgtcaaagaggcgggcgtggttgagacgacgatccgcgtg
tatcggcgctgcgtgatgcttctgcctgagaaagtggaggactttatcgcgttcctgcag
tctcccgaggtggcgcgctacgacgaggcggcgtgtctgctcgcggaagttgtcaacgac
gagagttgtccgacgacaaagacgcggcaccaactgtggctggacctctgcgacctcgtc
tgcgcgcatccccgcgagatcaagggcctgcgcgcggaggctgtgctgcgatcgggcatc
gcgcgcttctcagaccaggtggggaagctctggtgttccctggcttcacactttctgcgc
ctagggcagctcgagaaggcccgcgacatctatgaggaggcgctgcgcggcgtgcggacg
ctccacgacctcgcgctcgtctacgacgccttcgtgaacttcgaggaaacgcttctcgcc
gccaaaatgcaggagatggagcaggcagagaccgaggaggcgcgcgagaaggacgcccgc
agagccaagaagggcgctggcggggggagcggagagggaagggacgccgagggcgatcaa
gaggaggaagcccaccgcaagcagcgccggagggaacagaaaaaagagagagaagacgag
atcgacttccttatgactcgcctggagcacctcacggagcgacgcccgatccttgtctcg
agctgcaaactgcgacaaaatcctcacaacgtccacgagtggctcgccagagtcgacctc
tttaaaggcgacacaaacaagcaagtcgagacgttcagcgaggcggttgcgacggtagat
ccgcagcaggctgttggccgcgtctcggtgctgtggatcgccttcgcgcggtactacgaa
gaccgtggagacttgccgagcgcgcggctgattttcgagaaagcgacaaatgctgcgctg
cgcactgtcgacgagctcgcaagcatctggtgcgaggccgtggagatggagttgcgccac
gaggagcggcaacgcgccctcgagctcgtccgccgcgccatcaacaaaccgcgcgacgcc
gagcccgacagcgcgcaggcgaagctcttccgcagcgtcaaactgtggagtctcgccgcg
gacgtggaggagatggtcggcacccccgagacggttcgcctgtgctacgacaagatgttt
caactcaaagtcatcactccgcagttggtcaccaactacgcacatttcttggaggaacac
cgcttcttcgaggagtcgttcaaagtctacgagcgcggcatcgcggccttctgctggcct
cacctgaacgacctgtggctcatgtacctgacgaaattcgtgtcgcgctacggaagttca
aagctggaacgcgcccgcgagctcttccagcaagctacgtcctctgttcccccgcagtac
gcgaagcggctctttctgctctacgcgaagctcgaagaggagttcggcctcgccaaacac
gcgctcacgatctaccaggccgccaccaaggccgtcacgcaggccgaaaaactcgacatg
tacctaatctacatcgccaggacgacggagcttctcggcattgcgaggacgcgaaagatt
tacgaagaggcgattgaaaacctgcccgagaaagacgcgcgcgacatgtgcctgcgctac
gcggccgttgaaaagggcctgggagaagtcgatcggtgccgcgcgatttatgagcactgc
tcacagctctgcgacccgactcgagaccccgaattctggaagtcttggaaggagttcgag
gtgtctcacggcaacgaagacacattcaaggacatgcttcgcatcaagcgcagcgtccag
gctcagtacagccaggctcatctgaacgtcaccgagttagcgcagacagatctctcggag
tcgccgctgaatccgctggcggctgcggagaagcagctgaaggaggaagaagaagcgcga
aagaaactcgagatgcgcgaaaaggcgctagaggaacaactctacctgaagaagaagaag
gaaaccgacgacgcggagctcgcgcaggccgaagaggaattccgcagggtccaagacttg
cgcgcgcgggcgcgcatgttggcttcgcttccgccagatgcgcctttcttcgtctccctc
tcgtcgttccagggcgcgcggccgggctatcttttccatcgtgggtcgcaaggcatgggg
tattacctggacgagaggcaagtcggcgccgacttcgtttctgagcgtgagaaggcgttc
gtcaccgaggcgcgcgagggcggcgggcggcggcgagagcgcgaagaggcgagcggcggc
gagcccggcggagaggaagtcggcatcaatctggaagagtacgtgcctggtgaagtgttg
ggcagactggcgtccgaggcgaagaaaatgcgtacaaagaaggagtaa
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