Besnoitia besnoiti: BESB_019780
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Entry
BESB_019780 CDS
T10139
Name
(RefSeq) putative DNA mismatch repair protein MSH6-1
KO
K08737
DNA mismatch repair protein MSH6
Organism
bbes Besnoitia besnoiti
Pathway
bbes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BESB_019780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbes03400
]
BESB_019780
DNA repair and recombination proteins [BR:
bbes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BESB_019780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
AAA_29
Motif
Other DBs
NCBI-GeneID:
40307039
NCBI-ProteinID:
XP_029216046
UniProt:
A0A2A9M8T3
LinkDB
All DBs
Position
XI
Genome browser
AA seq
1512 aa
AA seq
DB search
MSPQQTKAAPAGSKPCGARRSGGGVYETSGKKQASILSFFSRQPTPSSADAASKGAARRA
SSPQEQDDAPAAASVPVSSSALPSDAGAQPGKKGSGAAQKSARRFSEGFAGKRQDADDAE
AATPDRAAHATPKESDASQENEEKKRQRVAPEKANGATKPCEDDDPPSEDVRKFKRIRKG
VRLSDDEEKVQTPASVRRKRQEEAKRKKGAEESKAKKGAKTEAEEEEDSEEEEDEEEFEA
SSMSDSSFENESEEDDDSDDDDEEEEEEEDEEEDEEEERRRRRKSAPKKKGKESESEPPS
SVKAKAPSSASPSPSTPSPSSGTKLKDLLYSSSATCSPPPARASESRPVSSPAGAAAKPT
GSTLSFAAAKEQLDESELRRRLLASPAAQNCHYFRHFVEDYYTYHRQFSFPPWSDPARMR
DLAGRKAIDCDAAYDFSTLWIPAPDSQMARTHARPHMTPGMAQYWEIKKQHFDKLILFKI
GKFYELVYGDACAAHRILDLKWMGGGGNDAKPHCGFPEQNLHVQARQLIQAGYKVVVVEQ
METPKELEKRNSQAGVGAKDKAVRREVCEVYSAGTVRHADMLNSEARYLLVLFFGDEEDD
DTQTPSGCGGDRPGDSSVAKGEENGCDEAEGLDEAMGVAAAAEKARVKRLSGLAEAAAVK
EEGGAARAGSREGAKSVLKPGFSACLVDVSTCRVALLHMADDPGAWPALRLLLAQTLPVE
VVYSPVNIPASVLKLLKYLPSAPQLSPLTAFPDLLAAHAEVDKYVASRLQSLPKAEPGGA
SHSERASLELCMRLCERWPSLHCALGGLCVYLRGCRLDASVLSICQFEVFRPRDASLLVL
DANALRQLEVLQTQEGSAKNSLFSHLNRTVTPFGCRLLRRWVVAPLRNARELRRRLDAVE
WLFSHPEAVDVVRKALRACPDVERLSAKICAQGLQGERKAVYFDQFHQKLLNEFLALLDA
FLAVERLVDSLRRMLGQDEEGATRVKAEVKADAGDPGKSQLVAAAADATTQTPGRLVELC
ADREHGGSFPVLAPLVASLKSKIATDADGAKIPAKGVLAAYDETEKEMQEVQQKLAKCLE
DLKAAWKMRSLAFVHSKFKYEVECPDTVSKQLLRDYECDITSSRKGFYRIRTPEICDLVA
ELEDLEQKQKDAFYPFFSVLFNEFYANFAHAFGRAIQIAAELDCLQSLASVVSHHAGGSG
QMCRPIILDARNDQPPVLSLKNCRHPVAETLMDNFVPNDIYLNCGSHVDKRTLLLTGPNM
GGKSTLLRQTALCVIMAQIGCFVPADSCTLTPVDRIFTRLGAEDFILQGASTFLVELKDV
ADLMTYGTQHSLAVIDELGRGTSTFDGTAIALASLEHITDKLQCRCLFATHYHLLCYEMQ
SHPHVVNVHMKAAIDEEHHSLAFLYKLAKGICPKSHGIHVARLAGIEPAILACAEEKSLS
LQQEIVRQQRQWRLLGVAKKLAGADAEELRRLFSERRESILEDLAEEEKARREDERALHA
ENAAEKDVDMEG
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgcagcagacgaaggccgcgcccgcaggctcgaagccatgcggcgcgcgccgc
tcggggggaggcgtttatgagacttctgggaagaagcaagcctcgattctctccttcttc
tcccgccagccgactccaagctctgcagacgctgcttctaagggcgccgcgcgtcgcgcg
tcttcgccacaggagcaggatgacgcgccggcggcggcaagcgtacccgtgtcgtcctcc
gcgctgccctcagatgcaggggcgcagccaggcaagaagggcagcggcgccgcccagaag
tccgcgagacgcttcagcgagggctttgctggcaagaggcaggacgccgacgacgcggag
gcggcaacccccgacagagccgcgcacgcgacccccaaggagagcgacgcttctcaggaa
aacgaagagaaaaagcgacagagagttgccccggaaaaagcgaatggagccacaaagccc
tgcgaggacgacgaccctccaagcgaagacgtgcgcaagtttaagagaatccgaaagggc
gtgaggctgagtgatgacgaagagaaagtgcagacgcccgcttcggttcggcgaaagcga
caggaggaagcgaagcggaagaagggagctgaggaaagtaaagcgaagaagggcgcgaaa
acagaggccgaggaggaggaggacagcgaagaagaagaggacgaagaagagttcgaggct
tcctcgatgagtgatagcagcttcgagaacgaaagcgaggaggacgacgacagcgacgac
gacgatgaagaggaagaagaggaggaagacgaggaagaagacgaggaagaagagagaagg
aggcggcggaaatctgcgccgaaaaagaagggcaaagagagcgagagcgagcctccgtct
tccgtaaaggccaaggcaccttcgtccgcgtctccttcgccgtctacgccgtctccgtcc
tcagggacgaagctgaaagatctgctttactcttcgtctgcgacgtgctcgcccccgcca
gcgagggcctcggagtcgaggcccgtcagttcgccggctggggcggcagcgaaacctacg
gggtcgacgttgtccttcgcggcggcgaaggagcagctcgacgagtctgagcttcggcgg
cggcttctggcctcaccggcggcacagaactgtcactattttcgtcacttcgtggaggac
tactacacctaccatcggcagttcagcttcccgccgtggtcagatcccgcacgcatgcgc
gacctcgcagggcggaaggcgatcgactgcgacgccgcctacgacttctcgacgctgtgg
atccccgcaccggactcgcagatggcgcgcacacacgcgcggccgcacatgactcccgga
atggcgcagtattgggagatcaagaagcagcacttcgacaagctgattctgttcaaaatc
ggcaagttctacgagctcgtctacggcgacgcgtgcgcggcgcaccgtattctcgacctg
aaatggatgggcggcggcgggaacgatgcaaagccacactgcggcttccctgaacagaat
ctccatgtgcaggctcgacagctgattcaggccggctacaaagtcgtcgtcgtggagcag
atggagacgccgaaggaactcgaaaaacgcaacagccaggcgggcgtcggcgcgaaggac
aaagccgtgcgacgcgaagtctgcgaggtctactcggcaggcaccgtacgacacgctgac
atgctcaacagcgaggcgcggtatttgctcgttctcttcttcggcgacgaagaagacgac
gacacgcagacgccgtcgggctgcggaggcgacagaccgggcgacagctctgtcgcgaag
ggcgaggagaacgggtgcgacgaggcggagggcctcgacgaggcgatgggcgttgcggcg
gcggcggagaaggcgcgggtgaagcgcctttcagggttggcggaggcggctgcggtgaag
gaggaagggggcgctgcgcgggcagggtcgcgggagggggcgaagagcgtgctgaagccg
ggattttccgcgtgcctcgtggacgtctcgacgtgccgcgtggcgctgctgcacatggcg
gacgacccgggggcgtggcctgcgctgcggctgcttctcgcgcagacgctgccggtggaa
gtcgtgtactcgccagtcaacatccctgcctcagtgctcaagctgctcaagtacctgccg
tccgcgccgcagctctcgccgctgactgcgtttcctgacctcctcgctgctcacgcagag
gtggacaagtacgtcgcgtcgcggctgcagagcctgccgaaggcagagcctgggggtgct
tcgcactccgagcgcgcgtcgctggagctctgcatgcgcctctgcgagcgctggccgtcg
ctgcactgcgcgctgggcggcctctgcgtgtatctccgcgggtgtcgcctggacgcgtcg
gtgctctccatttgccagttcgaggtcttccgcccgcgcgacgcgtcgctgcttgtgctg
gacgccaacgcgctcagacagctcgaggtgctgcagacgcaggaaggcagcgcgaagaac
tctctcttcagccacctcaaccgaactgtgacgcccttcggctgccgcctgctgcgtcgt
tgggtcgtcgcgccgctgcgcaacgcgcgggagctgcgtcgccgcttggacgccgtggag
tggctcttcagccacccggaggccgttgacgtcgtccgcaaggcgctgcgtgcatgtccc
gatgtcgagaggctctcagccaagatctgcgcgcaggggctccagggcgagcgcaaggcg
gtctacttcgaccagttccaccagaaactcctcaacgagttcctcgccctcctcgacgcc
tttctcgccgtcgaacgcctcgtggacagcctcagacgcatgctcgggcaagacgaggag
ggtgcgacgcgggtcaaggcggaggtcaaggcggacgcaggcgaccctgggaagagccag
ctggtggcggcggcggccgacgcgacgacgcagacgccggggcgactcgtggagctctgc
gcagacagggagcatggaggatcctttcccgtcctcgcgccactcgtcgccagcctcaag
agcaaaatcgccacagacgccgacggcgctaaaattcccgcaaagggcgttctggcggcc
tacgacgagactgagaaggaaatgcaggaagtccagcagaaactagccaagtgcctcgag
gatctgaaggccgcctggaagatgcgcagtctggccttcgtccacagcaaatttaagtac
gaagtggagtgcccagacaccgtgtccaaacagctgctgcgggactacgagtgcgacatc
acctcctccagaaagggattctacaggatccgaacgccagagatctgcgacctggtggca
gagttggaagatctggagcagaagcagaaggacgcgttttatccgtttttttcggttctc
ttcaacgagttctacgcgaatttcgcacatgcgttcggacgcgccattcaaatcgccgcc
gaactcgactgcctccagtcgctcgcctccgtcgtcagccaccatgcaggcggcagcggc
caaatgtgcaggccgattatcctcgacgcgcgcaacgaccagccgccggttctctccctg
aagaactgcaggcaccccgtggcggagacgctgatggacaacttcgtgccgaacgacatt
tacctgaactgcggctctcacgtcgacaagcggacgctgctgctgacgggacccaacatg
ggcggcaagagcacgctgctgcggcagacggcgctctgcgtcatcatggcacaaatcggc
tgctttgtgccagctgacagctgcaccctgacgcccgtagaccgcattttcactcggctg
ggcgcagaagatttcattcttcagggcgccagcaccttcctcgtcgagcttaaggacgtc
gcagacctcatgacttacggcactcagcactcgctcgcggtgattgatgagctgggaaga
ggcacttcgacgttcgacggaacggccatcgcgctggcgtcgctggagcacatcaccgac
aagctgcagtgtcgctgcttgttcgcgacgcattaccacctgctgtgctacgagatgcaa
agtcacccccacgtggtgaacgtgcacatgaaggcggcgatcgacgaggaacatcactcc
ctcgccttcctgtacaaactggccaagggcatttgccccaagtcccacggcatccacgtc
gcccgcctcgccggcatcgaaccggcgattctcgcgtgtgccgaggagaagtccctgagc
cttcagcaggaaatcgtgcgacagcagcggcagtggcgtctcttaggcgtggcgaagaag
ctcgcaggagcagacgcggaggagctgcggcgcctcttttccgagcgccgggagtccatc
ctggaggatcttgctgaagaagagaaagctcgccgggaagacgagagggccctacatgcc
gagaatgcagcggaaaaggacgtggacatggagggctag
DBGET
integrated database retrieval system
