KEGG   Besnoitia besnoiti: BESB_023000
Entry
BESB_023000       CDS       T10139                                 
Name
(RefSeq) putative DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bbes  Besnoitia besnoiti
Pathway
bbes03030  DNA replication
bbes03410  Base excision repair
bbes03420  Nucleotide excision repair
bbes03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bbes00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BESB_023000
   03410 Base excision repair
    BESB_023000
   03420 Nucleotide excision repair
    BESB_023000
   03430 Mismatch repair
    BESB_023000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bbes03032]
    BESB_023000
   03400 DNA repair and recombination proteins [BR:bbes03400]
    BESB_023000
Enzymes [BR:bbes01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BESB_023000
    6.5.1.6  DNA ligase (ATP or NAD+)
     BESB_023000
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     BESB_023000
DNA replication proteins [BR:bbes03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    BESB_023000
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     BESB_023000
DNA repair and recombination proteins [BR:bbes03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BESB_023000
   NER (nucleotide excision repair)
    Other NER factors
     BESB_023000
   MMR (mismatch excision repair)
    Other MMR factors
     BESB_023000
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C PH_PLEKHM2
Other DBs
NCBI-GeneID: 40307360
NCBI-ProteinID: XP_029215817
UniProt: A0A2A9LZJ3
LinkDB
Position
XII:complement(<714743..>721515)
AA seq 1026 aa
MKLSGGGSGHAMKQTSILSFLGKGGAAAPAPSPALQAAPKQPEAGTASPQLDPAEVSCKK
RLLAAPASADVQRKREKKSPLTAEDEKTETSREDATRAATDAAEPADACTEEKSGNAEAP
GKAESEANGEAQTESAAKAAAPRGGRLRKPAGDDGEEDSISEAESEHESIESDASEPSSQ
EGGNVAKVAASSAEGRRALEMLQKKKRSPSAGGKARAETLVSDSEGEGSSSASEESDAEA
ETRKRSKRPGASVLDLLCKEGRTAKLRPSPSEEAAPSEKKTGTRKKKSDEDEQLKTGTLF
ATRALGKEPSADLASPLFAPFQVPLESITAKPEANAKKAQDDTPAILFEVLVGAFDKIEQ
MKASGTGSSKKQTVILTNAFRLLLFYAPKLLHKAIYICLNKVAPDYLGQEVGVGESLILK
AMAETYGRTEAHLKKELQHTEDLGRIAEQSSCKTRTLFSPPRLTIDGVFTQLKAISLCAG
KDSQLHKRHLLKRLLVGAKGAEPKYIIRFLQQRMRTGASTATVYQALAFASFLTHNARDG
RAAVADTRRAEGEAAAAMSAVELEEHLSRTEQSVRRALCEVPNVEVVVSHLLAGATADTL
GSLCVVTPGVPLQPMLARPTRGFAEVAERLKDTAFTCEFKYDGERVQIHLMGEAAAAATA
PPAAAPGRVSPARVRLFSRNLEEITQKYPDIIEMILGAFKPATRECILDAEVVAFDVEKG
AILPFQTLTRRKRKDVSKDGIQVRVALFLFDCMRLNGECLLGQTLEARRAKLREAVDLHA
SPLVQQATYKDLDSSQDFEDFLNEAIEGNCEGLMVKTLRDNATYEPSKRSLNWLKVKKDY
VEGMTDSVDLVPIGAFYGKGKRSGTFGTYLLAVFNPKDETFQTVCKAATGFTEEALQNQH
KTLSDHIISHKKPYYDVTSKMEADVWFEACQVWECRAADLSISPVHTAGMGEAASDKGIG
LRFPRFLRVRDDKNPEQATTSTQIIDMYLNQFRQNKTGNAKPKPERVEDEEESDEEMEKK
EEDEES
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgaagctgtcggggggcggctcaggccacgcgatgaagcaaacgtcgatcctgagcttc
ctcggaaagggcggcgcggctgcgccggcaccttcgcccgctctgcaagcggcgccgaag
cagcccgaggcagggacagcctctccgcagctagaccccgccgaagtctcctgcaagaag
cgtctgctcgccgcgcccgcgtcggcagacgtgcagagaaagcgcgagaagaagagcccg
ctgaccgcggaagacgaaaagaccgaaacgagccgagaagacgcgacccgcgcggcgaca
gacgccgcggagccggcggacgcatgcaccgaggagaagagcggcaacgcagaggcgcca
ggcaaagctgaaagcgaggcaaatggagaggcccaaacagagtcggctgcgaaagccgct
gcgccacgaggcggcaggctgaggaaaccggccggcgacgacggcgaggaggacagcatc
agcgaagcggagagcgagcacgagtcgattgagtccgacgcctcagagccgtcttcacag
gagggaggaaacgtcgcgaaagtcgctgcgtcgtccgccgaaggccgcagggcgctggag
atgctgcagaagaagaaacgttcaccgagtgcgggcgggaaggcgcgcgcggagacgctc
gtctccgacagcgaaggcgagggctcgtcgtcggcttctgaggagtcggatgcagaggcg
gagactcgaaagcgctcaaagcgcccaggcgcttcggtgctggacttgctttgcaaggag
gggcggacggcgaagctgcggccttcgccgagtgaggaggctgcgccgagcgagaagaag
acaggcacccgaaagaagaaatctgacgaggacgaacaactcaaaactggaacgctgttc
gcgacgcgcgccctcggcaaagagccctccgccgacctcgcctcccctctttttgccccc
tttcaagtcccactcgagtccatcaccgcgaaacccgaggcaaacgcgaaaaaagctcaa
gacgacacccctgcgattctcttcgaggttctggtgggagccttcgataagattgaacag
atgaaggcgagcgggacaggcagcagcaagaagcagacggtgatcctgaccaacgcgttt
cgtctgttgctcttctacgcgccgaagctcctccacaaggcgatctacatctgcctcaac
aaagtcgcaccggactacttgggacaggaggtcggcgtcggcgagtcgctcattctcaag
gcgatggcggagacttacggccgcaccgaggcacatctcaagaaagagcttcagcacacg
gaggacctgggtcgcatcgccgagcagagctcctgcaaaacgcgcacgctcttttcgccg
ccgcgtttgacgatcgacggcgtcttcacgcagctcaaggcgatcagtctgtgcgccggg
aaggacagtcagctgcataagagacacctcctcaagcggcttctggtcggcgcgaagggc
gccgagcccaagtacatcattcgctttctgcagcaacgcatgcgcacaggcgcgtccacc
gccacggtttaccaggcgctggcgttcgcgtctttcctgacgcacaacgcgcgagacggg
cgcgctgctgtcgcggacacgcgccgcgcggagggagaggctgcggcggcgatgagtgcc
gtcgagttggaggagcatctgtcgcggacggagcagagcgtgcgccgagcgctgtgcgag
gtgccgaatgtggaagtagttgtctcgcatctgctggcgggcgcgacggcggacactttg
gggtcgctctgcgtggttacgccgggggttcccctgcaacccatgctcgcgcggccgacg
cgcggcttcgcagaagtcgcggagcgcctcaaggataccgccttcacctgcgagttcaag
tacgacggcgagcgcgtgcaaatccacctgatgggcgaggcagcggcggcggcgaccgcc
cccccggccgcggcgccggggcgcgtttcgccggcgcgcgtgcgactgttcagccggaac
ctcgaggagatcacgcagaagtaccccgacatcatcgagatgattctcggcgcgttcaag
ccggcgacgcgcgagtgcatcttggatgcggaggtggtcgccttcgacgtggagaagggc
gcgattctgccctttcagacgctcacgcggcggaagcggaaggacgtcagcaaagacggc
atccaggttcgcgtcgcgctctttctcttcgactgcatgcgcctcaacggcgagtgcctc
ctgggacagacgctcgaggcccgccgcgcgaagctccgtgaggcagtcgacctccacgcg
tcgcctctggtgcagcaggcgacctacaaagacctcgacagcagccaggactttgaagac
ttcctcaacgaggcgatcgaaggaaactgcgaagggctgatggtgaagactctgagagac
aacgcgacctacgagccttcgaagcgctcgctgaactggctgaaagtgaaaaaagactac
gtcgaaggcatgactgactccgtcgatctcgtccccatcggtgccttctacggcaagggg
aagcgcagcgggacttttggcacgtacctgctcgcggtgtttaatccgaaagacgaaacc
ttccaaacggtctgcaaggctgccacaggcttcaccgaggaggccctgcagaatcaacac
aaaacgctcagcgaccacatcatctcccacaaaaagccctactacgacgtcacgtcaaag
atggaggcggacgtctggttcgaggcgtgtcaggtctgggaatgtcgcgcagcggatctc
tcgatttcgcctgtacatacagcgggcatgggcgaagccgcctcggacaagggcatcggc
cttcggtttccgcgtttcttgcgcgtgcgggacgacaagaaccccgagcaagcgacgact
tctacgcagatcatcgacatgtacctgaaccagttccgtcaaaacaagacaggaaatgcc
aagccaaaacctgaacgtgtggaagacgaagaggagagcgacgaggaaatggagaaaaaa
gaggaagatgaggaatcgtga

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