Besnoitia besnoiti: BESB_032620
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Entry
BESB_032620 CDS
T10139
Name
(RefSeq) putative U6 snRNA-associated Sm family protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
bbes Besnoitia besnoiti
Pathway
bbes03018
RNA degradation
bbes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BESB_032620
09123 Folding, sorting and degradation
03018 RNA degradation
BESB_032620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbes03019
]
BESB_032620
03041 Spliceosome [BR:
bbes03041
]
BESB_032620
Messenger RNA biogenesis [BR:
bbes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BESB_032620
mRNA degradation factors
5'-3' decay
Lsm complex
BESB_032620
Spliceosome [BR:
bbes03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
BESB_032620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
40308244
NCBI-ProteinID:
XP_029215074
LinkDB
All DBs
Position
Unknown
AA seq
152 aa
AA seq
DB search
MAQVLQSLVDQKVEIVTADGRIFVGTLKGFDQSTNVILDKCEERIYSLDAAVEQIALGLY
LVRGDNIAVVGEVDVEVDESIQLSSVRAAPLKPVGFGSGDASAGLMLPRWVALRSSLVFA
VSRLGNAFYTPEPKSRRCGEGQYRSVCLCGSR
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggttcttcagagtctcgtggaccagaaagtcgagatcgtcaccgccgacggt
cgcatcttcgtggggactctgaagggcttcgaccagagcaccaacgtcatccttgacaaa
tgcgaggagagaatctacagcttggacgcggctgtggagcagattgccctcggactgtac
cttgttcgcggcgacaacattgccgtcgtgggcgaggttgacgtcgaggttgatgaaagc
attcagctctcctcggtgcgcgcggcgcctctcaagccggtaggttttggatccggagat
gcctctgctggtctgatgctaccgcgctgggtggctctccgatcaagtctcgtttttgcc
gtctcgcggctaggaaacgcgttttacactcccgaaccgaaatctcgccgctgtggcgag
ggccaatatcgaagcgtatgcctgtgcggcagtcgatga
DBGET
integrated database retrieval system
