Besnoitia besnoiti: BESB_036910
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Entry
BESB_036910 CDS
T10139
Name
(RefSeq) replication factor-a protein 1 (rpa1) subfamily protein
KO
K07466
replication factor A1
Organism
bbes Besnoitia besnoiti
Pathway
bbes03030
DNA replication
bbes03420
Nucleotide excision repair
bbes03430
Mismatch repair
bbes03440
Homologous recombination
bbes03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bbes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BESB_036910
03420 Nucleotide excision repair
BESB_036910
03430 Mismatch repair
BESB_036910
03440 Homologous recombination
BESB_036910
03460 Fanconi anemia pathway
BESB_036910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbes03000
]
BESB_036910
03032 DNA replication proteins [BR:
bbes03032
]
BESB_036910
03400 DNA repair and recombination proteins [BR:
bbes03400
]
BESB_036910
Transcription factors [BR:
bbes03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
BESB_036910
DNA replication proteins [BR:
bbes03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
BESB_036910
DNA repair and recombination proteins [BR:
bbes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
BESB_036910
MMR (mismatch excision repair)
BESB_036910
DSBR (double strand breaks repair)
HR (homologous recombination)
BESB_036910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
DUF223
CDC24_OB3
tRNA_anti_2
zf-UBR
Motif
Other DBs
NCBI-GeneID:
40308672
NCBI-ProteinID:
XP_029221242
UniProt:
A0A2A9MN20
LinkDB
All DBs
Position
II:2373256..2381530
Genome browser
AA seq
786 aa
AA seq
DB search
MQPHPRLGAPPGDFSAQSPARAHSSSFSARSAGASASYGGDTPHFDGQPPPGFPPQVSFG
FLTKFADAAFALQRQKGVCPSAQELLQLVDPHDPALLCLAALHAKNKTIITVSDGVSWCR
IASTQLPPLAPGASEPPTEEDLNAAALALSGCVIRLGQISITRTPRGKHIILARAFQVLS
RDYHGVAERLQMQQRAEVAFPSLQEAGAPAAAPSPCGLPHASPSHASSSSAAAARPLHAP
PAAHAGEDGLHGRHAASHFPQSREEGAAARAQPLYVQRADVRAQPLYPPPRDGGLPSAGG
PQRSMQSLASHRVAPYASAGSQQGQHGMRPAESFIPLKDLTAYVAKWTIRARVDIKGDIR
KFNGARGPGQLFNVELKDKDGEIRATFFNTAVDKWFNVLQEGKVYCFRGGTVKPKNPRFN
QTRHDYEITFDERSTITEVEGGDDIPSVTADLVDICGVEQKEVNSTISLMAVVHDYRPVQ
SITIKSTGQQKPKRDVYLVDEGGASLALTLWGDKADAIPEEQLSQKPVVLLKNVKVGDWN
GKKLDSQGHTRIELFPDSSRAAELQDWWNREGSQRSGFTSISGGGSSSIGRKEVLKSLEQ
VAQEAAQAEASVLSDKGVYATCCALLERVGDDRFSWPACPDCRKKMSEDMPGCWVCPSCR
KQCEQPNHTYMLNLSLMDVTGSLRCSCIGDKAEEFMSHTKAETVLLLAEHRALDEEGRSF
QDIFADANLEEWIFRICSKYDSWMDEVSIKQRVVAAAPLFRQASEQTQHRLDFVRSAFHH
LNIPLP
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgcatccgcgcctgggggcgccgccgggcgacttctccgcgcagtctcccgcg
cgcgctcactcgtcgagtttctcggcgcggagcgcgggcgcgtctgcgtcctacggcggc
gacactccgcactttgacggtcagccgcctccagggtttccgccgcaggtctcctttggc
tttctcaccaagttcgcagacgcggctttcgctttgcagcggcagaagggcgtctgccct
tccgcgcaggagctgctgcagctcgttgatccccacgaccccgcactgctttgcctcgcg
gcgctccacgcgaaaaacaaaacgatcatcacagtctcagatggagtcagctggtgccgc
atcgcctcgacgcagctgccgcccctcgcaccgggagcctccgagcctccgacggaggaa
gacttgaacgccgcagctcttgcgctctccggctgtgtaattcgactcgggcagatcagc
atcacgcgaacgccccgaggaaagcacatcattctcgcccgcgctttccaagtgctgtcg
cgcgactaccacggcgttgcggagcgactccaaatgcagcagcgagcggaggtcgctttt
ccctcgcttcaagaggccggcgcgcctgcagcagcgccctctccgtgcggtctcccgcac
gcgtctccgtcccacgcgtcttcttcgtctgctgcggcggctaggccgctgcatgcgcct
cctgcggcgcacgcaggcgaggacgggctccacggtcggcacgcagcgtcgcattttccg
cagagccgcgaagaaggcgccgccgcccgcgcgcagccgctctacgtgcagagagccgac
gtccgcgcgcagccgctgtatcctccgccgcgcgacggcggccttccgagcgcaggaggc
ccgcagcggagcatgcagagtctggcgagccacagagtcgcgccttacgcgtccgcgggg
tctcagcagggacaacacggcatgcggccggcggagagtttcattccgttgaaagatctc
acggcctacgtagccaaatggacgattcgcgcgcgcgttgacatcaaaggcgacattcga
aagttcaacggcgcgcgagggcctgggcagttgttcaacgtggagttgaaggacaaagac
ggcgaaatccgcgcgaccttcttcaacacagccgtggataagtggttcaacgtgctgcag
gaaggcaaggtctactgtttccgcggcggcaccgtcaagccgaagaatcctcgtttcaac
cagacgcggcacgactacgagatcactttcgatgaaaggtcgacaatcacggaagtcgag
ggcggcgacgacattccttccgtgaccgcggacttggtggacatttgtggagttgagcag
aaggaggtcaactcgacgatcagcctcatggcagttgtccacgactaccgcccggttcag
tccatcaccatcaagtccaccggccagcagaaaccgaagagagacgtgtacctggtcgac
gagggcggcgcgtcgctggcgctgacgctttggggcgacaaggcagacgcgattccggag
gaacaactcagtcaaaaacctgtcgttctgctcaaaaacgtgaaagttggcgactggaat
ggcaagaaactggattcgcaagggcacacgcgcatcgagctcttccccgacagcagccgc
gccgcggagctccaggactggtggaatcgcgaaggcagccaacgcagcggcttcacgtca
atctccggggggggcagctcttcgataggccgcaaggaagtcctcaagtcacttgagcaa
gttgcgcaggaggctgcccaggccgaggcttcagtcttgtctgacaagggcgtttacgcg
acctgctgcgcgctcctcgagcgcgtcggcgatgacagattctcgtggccggcttgtccc
gactgtcgcaagaagatgagcgaagacatgccggggtgctgggtgtgccccagttgcagg
aagcagtgtgagcagccgaaccacacctacatgttgaatttgtcgctgatggacgtcact
ggctcgctgcgctgcagctgcatcggcgacaaggctgaggagttcatgagccataccaag
gccgagaccgtccttcttctcgccgagcaccgcgcgctcgatgaggagggccgttccttc
caagacatcttcgccgacgcgaatcttgaggagtggattttccgcatttgctctaagtac
gattcgtggatggacgaggtctcgatcaagcagcgcgtggtcgccgcagcgccgctcttc
cggcaggcctctgagcagactcagcatcggctggactttgtgaggagtgcgtttcaccat
ctcaacattccgctgccttga
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