KEGG   Besnoitia besnoiti: BESB_051620
Entry
BESB_051620       CDS       T10139                                 
Name
(RefSeq) putative U2 small nuclear ribonucleoprotein family protein
  KO
K12828  splicing factor 3B subunit 1
Organism
bbes  Besnoitia besnoiti
Pathway
bbes03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bbes00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    BESB_051620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bbes03041]
    BESB_051620
   03036 Chromosome and associated proteins [BR:bbes03036]
    BESB_051620
Spliceosome [BR:bbes03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    BESB_051620
 Complex B
    BESB_051620
 Complex C
   U2 SnRNP specific factors
    BESB_051620
Chromosome and associated proteins [BR:bbes03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    BESB_051620
SSDB
Motif
Pfam: SF3b1 TOR1L1_N PPP2R1A-like_HEAT HEAT_EZ HEAT_EF3_N HEAT_2 Htt_N-HEAT_1 UME Adaptin_N XMAP215_CLASP_TOG DUF5742 Herpes_UL32
Other DBs
NCBI-GeneID: 40310091
NCBI-ProteinID: XP_029219520
UniProt: A0A2A9MGW6
LinkDB
Position
IV:complement(157038..164952)
AA seq 1420 aa
MENHGSGSGRSNSRHDASSVAATDSAGVAFDAHLYGETPAAHYVTEIDAETPLVAHDGGA
GGSSSGLSGSRPSRGGQRSTEDGARIAERERMLMIQEGDGPGGSEGIGGVDKSIAAREDF
YRRQRYQRALSPERADPFLDGELGANSRGGDSARTYADVMLEQQLDREKQAAVRQIRKMQ
EEAELQRQLHQQQQQLGAAAAEVVPEKKRRRWDGGAEGTGDGLTEAERQELARAKATSGA
KGEEGAAAAAAALVSRWDTPLQAGGQTPSAWGETPLVAGGESGAGAARAGAAGAAPGKKK
SRWDATPTVGGTGQETPTPGHWGATPAVNTAGTPMMSGSGGLTPLMARGGSGTPLVPGAG
TPIHGGGSGNATPMLAPGSQTPIMGRKRSRWDATPVLGAGSDADMAAAAAAGLTPGATPM
TGGAGMTPGKDGSTPMTSQMTPGITPLAVTGMAGATPLTPGTPLSTAEQLLQLRIQQEQD
ERTRYMTDEELDRLLPKEGYEIVTPPADYNPPPSSAAAAAARARHQAIGMTPGVAATPTP
IGVTPLYTMPEEGSVPSGMEGLMTMGTGIGGQLTAEGGGVTMKAEDYQFFAKLFEDKDEE
EMTQEEVKERKIQLLLLKIKNGTPPLRRTALRTLTEKAKEFGAAALFNQILPLMMQSTLE
DQERHLLVKVIDRVLYRLDDAVRPYVHKILVVIEPLLIDEDYYARIEGREIISNLAKAAG
LATMIATMRPDIDHPDEYVRNTTARAFAVVASALGIPSLILFLKAVCQSKKSWQARHTGI
KIIQQMSILMGCGVLPHLKQLVEIIQHGLDDQVLKVKTVTALALAALAESAAPYGIEAFD
SVLRPLWKGMGEMRGKGLAAYLKAIGSIIPLMDAYHASYYTREVMVMLVREFETNDEEMK
KIVLRVVRQCVATEGVESEYIRTDIVPPFFVKVWLVRNALDRRTAKLLIETVVEIANKAG
GAHIIQQIVEDLKDPSEPFRKVTLEALEQIIVNNGVLDVDNRLEEQLIDGLLYAFQEQTS
EDTTALLNGFSTIVNALGTRIKPYLPQICGVIRWRLNTPSAKLRQQAADLIARIAVVMQK
CGEEQMLGHLGLFLYEYLGEEYPEVLGSILGALKAIVNVIGMNKMTPPIKDLLPRLTPIL
KNRHEKVQENVIDLVGRIADRGGDLVSPKEWDRICFDLLDMLKASKKAIRRATVNTFGYI
ARTIGPQDVLATLLNNLKVQERQLRLCTTIAIAIVAETCLPYSVLPALMNEYRVQELNVQ
NGVLKTLSFMFEYIGEMAKDYIYTVVPLLEDALMDRDLVHRQTAAWATKHLALGVHGLSC
EDALLHLMNYVWPNIFEKSPHLVQAFFDAVDGMRVSLGAGIVFRYVLLGLFHPAKKVREV
YWRVYNNLYIGHQDAMVAFYPPIPNDEKGCYARDELLYVI
NT seq 4263 nt   +upstreamnt  +downstreamnt
atggagaaccacgggagcggcagcgggcgctccaacagccgccatgacgcctcttcggtt
gcggcgacggacagtgcaggcgttgcgttcgatgcgcatctttacggggagacaccggca
gcgcactacgtcactgaaatcgatgcagagacacctctcgtcgctcacgatggaggcgct
ggagggtcgtcctcgggtctatccggcagccgccccagtcgaggcggccagcggtcaact
gaggacggggctcgcatagcggagcgtgagcggatgctgatgatccaggagggcgacggc
cctggagggtcggaagggataggtggcgtcgacaaatcgatcgccgcccgcgaggacttt
tatcggcgacagcgctaccaacgcgcgctctctccggagcgtgccgatccctttttggat
ggcgagctcggcgccaactcgcggggcggcgacagcgcccgtacctacgctgacgtcatg
ctggagcagcaactggatcgcgaaaagcaggctgcggttcgtcaaatccgaaagatgcaa
gaggaggcggagcttcagaggcagcttcaccagcagcagcaacagctgggcgcggcggct
gcagaggtcgtgcctgagaagaaacggagacggtgggatggcggggcggaggggactggg
gacgggctcaccgaggcagaaaggcaggaacttgcgcgcgccaaagctacctcaggcgca
aagggcgaggagggcgccgcagccgctgctgctgccctcgttagccgatgggatacgccg
ctgcaggctggcggacagacaccgagcgcatggggcgagacacctctcgttgccggcggg
gagagcggcgcaggagccgctcgagcaggggccgctggagccgcgcctggaaagaagaag
agcagatgggacgccacgccgacggtcggaggcactggacaggagactccgacaccaggc
cactggggggcgacgccggctgtcaacacagcggggacgccgatgatgtcaggaagcggc
ggcttgacgccgctgatggcgcggggggggagcggcacgccgctagttcccggcgcaggc
acgccgatccacggaggcggctcaggcaacgcgacgccgatgctcgccccgggctcgcag
acgcccatcatggggcgaaagcgcagccgttgggacgccactccagtcctaggcgcaggc
tctgacgccgacatggcggccgccgcggccgcgggccttacgccgggagccacacccatg
acaggcggtgcgggcatgacgcctggaaaggacggcagcacgccgatgaccagccagatg
acccctggcataacgcctttggccgtcacagggatggctggggcgacgccgctgactccg
gggacgcctctgtcgactgctgagcagctgctgcagctgcgcatacagcaggagcaggac
gagcgtacgcggtacatgactgacgaagaactcgatcgtctgctgcccaaggagggatac
gaaatcgtcactccgccagctgattacaaccctccgccctcgtccgctgcggcggcggcg
gcgcgtgcccggcatcaggccattggcatgacgccgggcgtcgcggcgaccccaacgccg
atcggcgtgactcccctgtataccatgcccgaagagggttctgttcccagcggcatggag
ggcctcatgaccatgggaacgggcataggtggccaattgaccgcggagggtggcggcgtc
acaatgaaggctgaagactaccagttcttcgcaaaactgtttgaagacaaggacgaggaa
gaaatgactcaagaggaggtgaaggaacgcaagattcagttgcttctgctcaagatcaag
aatggaacgccgccgctgcgccggacagcgctccgaacactgacagagaaggcaaaggaa
tttggtgcagccgcgctgttcaaccagattctccctctgatgatgcagagcaccttggag
gaccaagagcgacacttgctggttaaggttatcgatcgcgtgctgtaccgcctcgacgat
gccgttcgtccgtacgtccataagatcctcgttgttattgagccgcttctcatcgacgag
gactactatgcgcgcattgagggaagagaaatcatctccaacttggcgaaggccgccggc
ctggcgacgatgattgccactatgcgtcccgatatcgaccatcctgacgaatacgtccgc
aacacaactgcaagagcgtttgcggttgtggcgtctgcgttggggattccctcgctgatt
cttttcctcaaagccgtgtgccagtcgaagaaatcctggcaagcacgccatacaggcatc
aagatcattcagcagatgtccattctcatgggctgcggagtgcttccgcatctgaaacag
cttgtggaaatcatccagcacggacttgacgaccaagtgctcaaggtgaagacagtcaca
gctctcgcgctcgccgccttggctgagtctgcggcgccgtacggtatcgaagccttcgat
agtgtgcttaggcctctttggaagggtatgggagaaatgcgaggaaagggtctcgcggcg
tacttgaaggctatcggttccattattcctcttatggacgcctaccacgcctcgtactat
acacgagaagttatggtcatgttggtgcgtgagttcgaaacgaacgacgaagaaatgaag
aaaatcgttctcagagtcgtccgacagtgtgtcgcaacggaaggtgtcgagagcgaatac
atccgcacagatatcgtgccgccatttttcgtcaaggtctggttggtgcggaacgctcta
gatcgccgcacggcgaagctgctgattgagacagtcgtggagatcgccaacaaagccggg
ggcgcccacatcatccagcaaattgtagaagacctgaaagaccccagcgagcctttcaga
aaggtgaccctggaggctctggagcagatcattgtgaacaacggcgtcttggatgtcgat
aatcgtctggaggagcagctcatcgatggcttgctgtacgccttccaggagcaaacgtcg
gaagacaccactgctctgctgaatggattttctacgatcgtgaacgccctgggcacgcgc
atcaagccgtacctgcctcagatttgtggtgttattcgctggcgtctcaacactccaagc
gcgaaactcaggcaacaagcggcagacctcattgcacgcatcgcggtcgtcatgcagaag
tgcggcgaggagcagatgcttgggcatttgggacttttcctgtacgaatatctcggggaa
gaatatccggaggtcttgggtagcattttgggcgcgttgaaggcgattgtgaatgtgatt
ggcatgaacaaaatgacgcctccgatcaaggatctgcttccgcgtctcacgccgatactc
aaaaaccgacacgagaaggttcaagagaacgtgattgaccttgttgggcgtatcgccgac
cgtggaggagatctggtgtcgcccaaggagtgggatcgcatttgtttcgatctgctggat
atgctgaaggccagcaagaaggcgattcgacgcgcgacggtcaacaccttcggctacatt
gctcgaaccatcggtcctcaggacgtgctggccaccttgctgaacaacctgaaggtgcag
gagcgccagctgcgtctgtgcactacgatcgctattgccattgtggctgaaacctgcctg
ccatattcggtgctccccgccttgatgaacgaatacagagtccaggagctgaatgtgcag
aatggtgtcctcaagacgctctccttcatgtttgagtacattggagaaatggccaaggat
tacatctacacggtcgtccccttgctcgaagacgctctcatggatcgcgacctcgtgcac
agacagactgctgcgtgggcgaccaagcacttagctcttggggtgcatggtctgagctgt
gaagatgcgctgctgcatttgatgaactacgtgtggccgaatatcttcgaaaagtcgccg
catcttgttcaggccttctttgacgcggtcgatggcatgcgtgtctccctcggcgcgggt
atcgttttccgctacgtcctcttgggcctgtttcatccggcaaagaaggtgcgtgaagtg
tactggcgagtgtacaacaacctctacatcggtcatcaggacgccatggttgcgttctat
cctcctattccgaacgacgagaaaggctgctatgctcgggatgagctgctgtatgttatt
tag

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