KEGG   Besnoitia besnoiti: BESB_053770
Entry
BESB_053770       CDS       T10139                                 
Name
(RefSeq) DNA-directed RNA polymerase II RPB6
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
bbes  Besnoitia besnoiti
Pathway
bbes03020  RNA polymerase
bbes03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bbes00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BESB_053770
  09124 Replication and repair
   03420 Nucleotide excision repair
    BESB_053770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbes03021]
    BESB_053770
   03400 DNA repair and recombination proteins [BR:bbes03400]
    BESB_053770
Transcription machinery [BR:bbes03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     BESB_053770
  RNA polymerase III system
   RNA polymerase III
     BESB_053770
  RNA polymerase I system
   RNA polymerase I
     BESB_053770
DNA repair and recombination proteins [BR:bbes03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      BESB_053770
SSDB
Motif
Pfam: RNA_pol_Rpb6 LID
Other DBs
NCBI-GeneID: 40310306
NCBI-ProteinID: XP_029219735
UniProt: A0A2A9MID8
LinkDB
Position
IV:complement(1646903..1648080)
AA seq 149 aa
MADDEIDHMFAGEPGGFGDDFGEDFGDDELIDDFDVERAAAAAAAGHDQETDVILDPNDP
RAARPNARPSEGPRITSPYITKFEKARVIGTRALQISMNAPITIPLDGETDPLIIAEKEL
YQKTIPFTIRRYLPDGSYEDWKIQELIVD
NT seq 450 nt   +upstreamnt  +downstreamnt
atggcagacgacgaaattgatcacatgtttgcgggcgagcctggcggctttggcgacgac
ttcggcgaggatttcggagatgatgaactcatcgacgacttcgacgtggagcgagcggcg
gctgcggccgccgcaggccacgaccaggaaaccgacgtcattctagatcccaacgatcct
cgcgcggcgcgtccgaacgcgcggccgagtgaaggcccgcgcatcacgagtccatacatc
accaagttcgagaaggcgcgcgtcattgggacgcgggcgcttcagattagcatgaacgcg
ccgataacgattccgctggacggcgagacggatccgttgatcatcgccgaaaaggagctc
taccaaaagacgatccccttcacgattcgcagatacctgcccgacggcagctatgaagac
tggaaaatccaggaattaatcgtggactga

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