Besnoitia besnoiti: BESB_054240
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Entry
BESB_054240 CDS
T10139
Name
(RefSeq) ATPase, AAA family protein
KO
K10754
replication factor C subunit 1
Organism
bbes Besnoitia besnoiti
Pathway
bbes03030
DNA replication
bbes03410
Base excision repair
bbes03420
Nucleotide excision repair
bbes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BESB_054240
03410 Base excision repair
BESB_054240
03420 Nucleotide excision repair
BESB_054240
03430 Mismatch repair
BESB_054240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbes03032
]
BESB_054240
03400 DNA repair and recombination proteins [BR:
bbes03400
]
BESB_054240
DNA replication proteins [BR:
bbes03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
BESB_054240
DNA repair and recombination proteins [BR:
bbes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
BESB_054240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
AAA_lid_RFC1
AAA_30
AAA_22
AAA_5
Rad17
AAA_assoc_2
AAA_16
AAA_18
BRCT
AAA_19
AAA_17
AAA_33
AAA_28
nSTAND3
RuvB_N
AAA_11
Motif
Other DBs
NCBI-GeneID:
40310353
NCBI-ProteinID:
XP_029219782
UniProt:
A0A2A9MJE3
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All DBs
Position
IV:complement(<2124769..>2134810)
Genome browser
AA seq
1247 aa
AA seq
DB search
MDKKRADIRKFFKPKASSDAASKEAQRNDASKPTEPASPGSQRATRRQSMQVLTDGDSPS
GTPKKRAAAHPRGKRSRLRRLSSSEDEGCSRHGSASPPSSSKAAAKKSQASCETRPREVK
RRCEGDAAGDAARHKDKHTLAASDTTKLSDAQRSQSPFRTEVVDVDEFFANAVEKAVEKA
KGGRASARREGEDAGAEEAKGGESTGASAPAKTASQWAKLVKAMEPEKIRQERRRQEAGD
AATVRPSDDEADGRGKKSEQARGRDSEEEYVEESEDEESADDYEEDESGDEDIEVKHAKV
KKVGSLRKKRGGQASDCALAPASPPASPSKKQIKTESRSHGARDGEGASFTAASGSSEGA
TGVSKRRLEDSASPSKKKRKNEVKEEGAQALAASTAFAGKTFVFTGVLDAMSREDAVAAV
LEHGGRCTSAVLQRPSLALVAGAEWMPPDELAFGEAGVQTATHGKPTSLQKCVCFHDRLG
AGGRPRGDVWLQVPQGDAARRASGRGGKKKPGISSLAILTEREFLAMLPAAAGRRLPSSP
VAGALSTLTAPAQAKLAATAGAEGDGEPASRPAALKNTDAKNVLWAEKYRPRRAEEFVGN
REHLRTLQAWLEDWKDVCLLGKKKKPPQRSFAPSFSPFGFPPTVNLNARAALLSGPPGTG
KTTAARLAAEAAGYDVLEYNASDARNKAHIEDIGNMTSGGLTLHSFIDQKNEASHGAPGR
NAQRPRGACVLMDEVDGLSGGDRGGAQAIVKLIETSKCPIICICNDRMHSKVRTIASKCL
DLRFQAPHAAGLKQRVQDIAAAEKLQLVPQAVDYLCESSGGDLRQIMNSLQMLAFEARTV
KNADGLDSDGQPGGDKSAFIVGLKDEQVMFGPFECCKQLLDSHQAAKLSRRQKLDRFFTD
YDMLPLLIQENYVESFRQGQQCGSSPTAGTSASPYSYTAKKQFSSANARPGGSTNDAMLT
NLVASAACDLVEADVMNCVLRTNQQWGLLPDIGFFCCVSLPSKVEKAQGCLGRVQFPSWL
GRNSTQTKHKRLLTELLLVLLNRLQCCSTSSGLKLSGYLDALYRKCVGPLASAGKEDPKL
AVEAAMRAMAEYSLTRVMVVENLNSLRLKSQERLYDAVETRVKSSFTRMCNAAAKASSAS
IVEAKKSRNAKSWAAEEEEGEEGAEEAPGDDDPDAADDDEDPLRDYCIVAAVKRQKSANG
SGARAQRGRGGSTAARSSGSQGKAPAGEAARRGRGGRGKGSARGKNT
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggataagaagcgagcagacatccgcaagttctttaagccgaaggcatcgtcagatgcg
gcctcaaaggaggcacagaggaatgacgcctccaagccgacagaacccgcgtctccaggc
tcgcagagagcgacaaggagacaatcgatgcaggtcctcacagacggcgactcgccctcg
ggcactccaaagaagcgcgcggcagcccacccgcgcggcaagcgcagccggctgcgccgc
ctgagttcgtcggaggacgaggggtgttcgcgccacggctccgcatcgccgccctcttca
tcgaaggccgcggcgaagaagagccaggcaagctgcgagacgaggccgcgcgaggtcaag
aggcgatgcgagggagacgcggcgggagacgccgcgcggcataaggacaagcacaccctg
gcggcgagcgacaccacgaagctcagcgacgcgcagagaagccagtcacctttccgcacg
gaggtcgtggacgtcgatgaattttttgcgaacgccgtggagaaggcggtggagaaagcg
aagggcgggcgggcgtctgcgcggcgcgaaggcgaagacgcgggcgcggaggaggcgaag
ggcggcgagtcaacgggagcgagcgcgcccgccaagacggccagccagtgggcgaagctc
gtgaaggccatggagcccgagaagatccgccaggagcggcggagacaagaagccggagac
gccgcgacggtccgcccctcagacgacgaagcagacgggcgcgggaagaagagcgagcaa
gcgcgggggcgggacagcgaggaagaatacgtggaggagagcgaagacgaagagagtgca
gatgattacgaggaagacgagagtggagacgaggacatcgaggtgaaacacgccaaggtg
aagaaggtgggaagccttcgcaagaaacgtggcggccaggcctcggactgcgcactcgcc
ccagcgtcgccgccggcgtctccctcgaaaaaacaaatcaagacggagagtaggagccac
ggggcgagggacggtgaaggcgcttctttcacagctgcgtctggcagctcggaaggcgcg
actggcgtctcgaagaggcgtctcgaggactcggcgtcgccctcgaagaaaaagcgaaag
aacgaggtgaaggaagaaggggcccaggctctggccgcaagcactgcctttgctggaaaa
acgttcgtcttcacaggcgtcctcgacgcgatgagccgcgaagacgccgtcgctgctgtc
ctcgaacacggcggccgctgcacctccgcggttctgcagaggccctcgctggccctcgtg
gctggcgcggaatggatgcctccagacgaactggctttcggcgaagcaggcgtgcagacc
gctacacacggcaagcccacatccttgcagaaatgtgtttgtttccacgacaggctcggt
gctggaggacggccgagaggtgacgtctggctccaagtaccgcaaggcgatgcagctcgt
cgagcaagcggccgcggggggaagaagaagccagggatttcgtcgctggcgattttgacg
gaacgagaattcctcgcgatgctgccggcggctgcgggccgaagactcccctcctcgccc
gtggcgggggcgctgagtaccctgaccgcccccgcgcaggccaagctcgccgccaccgct
ggcgcagaaggcgacggagagccggcaagtcgccctgctgccctgaagaacaccgacgca
aaaaacgtcttgtgggccgaaaaatacaggccgcggcgcgcggaggagttcgtcggaaac
cgcgagcacttgcggacgctccaggcctggctcgaggactggaaagacgtctgcctgctc
ggaaagaagaagaagccaccgcagcggagcttcgcgccgtccttctctccctttggcttt
ccaccgaccgtcaacctcaatgcccgcgcagctcttctcagcggccctccaggcaccggc
aaaacgacggcggcgcgcctcgcggccgaggctgcaggctacgatgtgctcgaatacaac
gcgtcggatgctcgcaacaaagcgcatatcgaagatattggaaatatgacctctggcggc
ctgacgcttcactcgttcatcgaccaaaagaatgaagcgtcccatggggcaccaggaagg
aacgcacagcgaccgcgaggcgcatgcgttctcatggacgaagttgacggtctgagtgga
ggcgatcgcggcggcgctcaggccatcgtgaagctcatcgagacgagcaagtgccccatc
atctgcatttgtaacgatcgtatgcattccaaggtgcggacgatcgcctccaagtgcttg
gatcttcgctttcaagctccccatgcggcaggcctcaagcagcgcgtgcaagatatcgcg
gcagcggaaaagctccagctggtgccccaggccgtcgactacttgtgtgaatctagcggt
ggcgatctgcggcagatcatgaactcgcttcagatgctggcgttcgaagctcggaccgtg
aagaatgctgacggactggactcagacggccagcctggcggcgacaaatcggcgttcatc
gtgggccttaaggatgaacaggtgatgttcggcccgttcgagtgctgcaagcaactgctg
gacagccaccaagccgcgaagctgtctcggcggcagaagctcgacagattcttcacggac
tacgacatgcttccgctcctcattcaggagaattacgttgagtccttccgccagggtcag
caatgcgggtcgtcccccaccgcgggaacctccgcgagtccctactcgtatacggcaaag
aagcaattctcttctgcaaacgcgcgtcctggggggtccacgaacgatgcgatgctaaca
aacctggtcgcctccgctgcatgtgacctcgttgaagcagatgttatgaactgcgtgctg
aggacgaaccaacagtggggactgcttccggacatcggcttcttctgctgtgtctccctg
ccttccaaagtcgagaaggctcagggctgtctgggtcgcgttcaattcccttcttggttg
ggccgcaacagcacgcagacgaagcacaagcgcctgctgaccgagctgcttctcgtgctt
ctcaaccgtcttcagtgctgcagcacaagcagcggcctgaaactttcgggctacctcgat
gcgctctacagaaagtgcgtcggtcccttagcgagcgcgggcaaagaggaccccaaacta
gcggtggaagctgcgatgcgggccatggcggagtattccctcacgcgagtgatggtggtt
gagaatcttaactccctgcgcctgaaaagccaagagcggctgtatgacgcggtcgaaacc
cgtgttaagagcagctttactcgcatgtgcaacgctgcagccaaggcatcgtctgcctct
atcgtggaggccaaaaagagcaggaacgccaagagttgggcggcggaagaagaagaaggc
gaggaaggcgcggaagaagcccctggtgacgatgaccctgatgccgcggacgatgacgaa
gatcccctccgcgactactgcattgttgcggccgtcaagaggcaaaagagtgcgaatggc
tccggagcgagagctcagcgaggccgcggaggctcaaccgctgcaaggtcctcggggagc
cagggaaaagctcctgcaggggaggccgcgcgccgaggcaggggcggtcgcggcaaaggg
tcggctcgtggcaagaacacgtag
DBGET
integrated database retrieval system
