KEGG   Besnoitia besnoiti: BESB_062980
Entry
BESB_062980       CDS       T10139                                 
Name
(RefSeq) putative U6 snRNA-associated sm family protein Lsm2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
bbes  Besnoitia besnoiti
Pathway
bbes03018  RNA degradation
bbes03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bbes00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    BESB_062980
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BESB_062980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbes03019]
    BESB_062980
   03041 Spliceosome [BR:bbes03041]
    BESB_062980
Messenger RNA biogenesis [BR:bbes03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     BESB_062980
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     BESB_062980
Spliceosome [BR:bbes03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    BESB_062980
 Complex C
  U2 snRNP components
    BESB_062980
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 40311226
NCBI-ProteinID: XP_029219420
UniProt: A0A2A9MGN0
LinkDB
Position
V:3442225..3443029
AA seq 100 aa
MFFSFFQTLVERQTQIMVELKNDLQITGALHSVDQFLNIKLNNVSVADPEKCPHLLSIKN
CFVRGSAVRYVHLPPSAVDLAQLQDLCRRESANGQDKEKK
NT seq 303 nt   +upstreamnt  +downstreamnt
atgtttttttctttcttccagacgctcgtggagcgtcagactcaaatcatggttgagctc
aagaacgacttgcagatcaccggcgcactccactctgtggatcagttcctcaacatcaag
ttgaacaacgtctccgtggccgaccctgagaagtgcccgcatttgctgtctatcaagaat
tgcttcgtgcgaggctccgctgtgcgctacgtgcatctgccgccttctgcagtcgacctc
gcgcagctgcaggatctgtgccggcgagagagcgccaacgggcaggacaaagagaagaag
tag

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