Besnoitia besnoiti: BESB_068480
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Entry
BESB_068480 CDS
T10139
Name
(RefSeq) cleavage and polyadenylation specifity factor protein
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
bbes Besnoitia besnoiti
Pathway
bbes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BESB_068480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbes03021
]
BESB_068480
03019 Messenger RNA biogenesis [BR:
bbes03019
]
BESB_068480
Transcription machinery [BR:
bbes03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
BESB_068480
Messenger RNA biogenesis [BR:
bbes03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
BESB_068480
U7-dependent histone pre-mRNA processing factors
BESB_068480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
CPSF73-100_C
RMMBL
Lactamase_B_6
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
40311774
NCBI-ProteinID:
XP_029218824
UniProt:
A0A2A9MA02
LinkDB
All DBs
Position
VI:<3131914..>3135749
Genome browser
AA seq
1008 aa
AA seq
DB search
MYPSSSAADGGPLLADCAGQNPRSCGEGEALAAAPAPPPSSASSSSSSSSFAPCFALPGA
LPDPATLPPMLPLSPSPPLATSASSAATVHIDASAKRRRLLLGEDWVEITPLGAGCEVGR
SCVVVRYKGLTVMFDCGVHPAYSGLGALPIFDAIDMTSVDVCLVTHFHLDHCGALPYLVT
KTAFRGRVFMTEPTRVISKLLWLDYARMSAFATTACPRTAAVAPLGGDGGEKGAGNYLYD
EDDVDATVQMIECLDFHQEVEVGGIKISCFGAGHVLGACMFLIEIGGVRMLYTGDFSREK
DRHVPVAEVPPVDVQLLICESTYGIHVHDDRQLRERRFIKAVLDIVLTRGGKCLLPVFAL
GRAQELLLILDEYWIAHPEVRHVPILFLSPLSSKCMIVFDAFIDMCGDAVRNRALRGENP
FAFRFVKNLKTFESARVYVHHEGPAVIMAAPGMLQSGASREIFEALAPDAKNGVILTGYS
VKGTLADELKREPETIQLPDRVLRRRCSFEVISFSAHSDYQQTQDFIGKLKVPNVVLVHG
ERGEMRRLKEKLEEERPALCVFTPEILQKVSLQFTPSRCVVAAGKLGDDVQRLLIPAADS
DLPQHAAAGDAAHSRGAEAPDGGDAAPRAADADAPGAAGAAEALRPARSGDGGVSADVEG
VLVVQEGQPPLLLYPEDLPTSGKIAVTRLRQKLRLPFVRPLGALRQALQQIYEEVEDAPA
DATWADAEDGAEGGGARRSQESRALQDAETSRLEAKGASAGAGGKETLPAETNGERDVAF
DATRADGSFVVGRAVRVSRHPRKREEIVVEWLTSPTADLIADSVSFLAIDLMRDGSGLTA
EEMVFSSREAQSEGAIADVLIAQLQRHFGAVEALPQLEADRASAAGHASRVKTEVEDLAC
ASAAKQRDDDRLREALAAGDVLLRFFVRNPAAAASAPGAAEDARPREEEKSAAERDSKKM
QDAGDDQQIPVEIDMASRTVRCKNPEIQQKVYAMVRRIESALLPLPLS
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgtatccgtcgagttcggccgccgacggcggccctctcctcgcggactgcgcggggcaa
aacccccgaagctgcggagaaggcgaggcgcttgctgccgcccctgcgccgcctccctcg
tctgcctcttcgtcttcgtcttcctcttcttttgcgccgtgttttgcgcttcccggggct
ctccccgacccagcgacgcttcctccgatgcttccgctctcgccttcgccgccgctggcc
acgtccgcatcgtccgcggcgacggtgcacatcgacgcgtctgcgaagcgccgtcggctc
cttctgggggaagactgggtagagatcacgccgctgggggcgggctgcgaggtagggcgg
tcgtgcgtagtggttcgctacaagggcctgacggtcatgtttgactgcggggtgcatcca
gcgtacagcgggctgggcgcgctgccgattttcgacgcgatcgacatgacgagtgtcgac
gtctgtctcgtcacgcacttccacctcgatcactgcggcgcgctgccttacttggtgacc
aaaactgcgtttcgcgggcgagtcttcatgactgagccgacgcgggtgatctcaaagctg
ctgtggctcgactacgcgcgcatgagcgccttcgcgaccaccgcctgcccgaggaccgcg
gcggtggcgcccctgggcggcgacggcggcgagaagggagcgggtaactacttgtacgac
gaggacgacgtggacgcgacggtgcagatgattgagtgcctcgactttcaccaggaagta
gaggttggcgggatcaagatctcgtgtttcggcgcagggcacgtcctcggcgcctgcatg
ttcctcatcgagatcggcggcgtccgcatgctgtacacaggcgatttcagccgcgagaag
gacaggcacgttcccgttgcggaggtcccgcccgtcgacgtccagctgctgatctgcgaa
agcacctacggcatccacgtccacgacgacaggcagcttcgggagcggcgcttcatcaaa
gccgtcctcgacatcgtcctcacgcgcggcggcaagtgcttgctgccggtcttcgccctg
ggacgcgcgcaggagctgctgctcatcctggacgagtactggatcgcgcaccccgaggtc
cgccacgtgccgattctcttcctctcgccactctccagcaagtgcatgatcgtcttcgac
gccttcattgacatgtgcggcgacgccgtccgcaaccgcgcactccgcggggagaatccg
ttcgctttccgcttcgtgaaaaacctcaagaccttcgaatcggctcgcgtgtacgtgcac
cacgaggggcctgccgtcatcatggctgcgcccggcatgctgcagagcggcgcgagccgc
gagatctttgaggcgctcgcgccggatgcgaagaacggcgtcatcctcaccgggtactcc
gtcaaaggcacgctggctgacgagctgaagcgtgaacccgagacgattcagctccctgac
cgcgtgctgcgcagacgctgctccttcgaggtcatctccttcagcgcccactctgactac
cagcagacgcaggacttcatcggcaaactgaaagtgcccaacgtcgtcctggtgcacggc
gaacgcggcgagatgcgcagactgaaggagaagcttgaagaggaacgccccgcgctctgt
gtcttcaccccggaaatcctgcaaaaagtcagccttcaattcacgccctcgcgctgcgtt
gtcgctgccggcaaactcggcgacgacgtgcagcggctcctcatccccgccgcagacagc
gacctgcctcagcacgccgcggcgggagacgctgcccacagccgcggcgccgaggctcca
gacggcggcgacgcggccccgcgggcggcggatgcagacgccccgggggctgccggcgcg
gcagaagcgttgcggcccgcgcgcagcggggatggtggtgtctccgcggacgtcgagggc
gtgcttgtcgttcaggagggacagccgccgctgctgctgtaccccgaagacctgcccacg
agcggcaagatcgcggtcacgcgcctgcggcagaagctgcgtctgccgttcgtccgtcct
ctgggcgcgctgcgccaggcgttacagcaaatctacgaggaggtcgaagacgcgcccgcc
gacgcgacgtgggcagacgcggaggatggcgccgaagggggcggagcgcggcgaagtcaa
gagagccgcgcgctgcaggatgcagagacgagtcgcctggaagcaaagggcgcttcggcc
ggcgcaggaggaaaggagacgctccccgcagaaacgaatggcgagcgagatgtcgccttt
gacgcgacgcgcgcggacggcagcttcgtcgtgggacgcgcggtacgggtgtccagacac
ccgcggaagcgggaggagatcgtagttgagtggctcacaagcccgacggcggacttgatt
gcggactcggtgagctttctcgccatcgacctcatgcgcgacggcagcggcctcacggcg
gaggagatggttttctcctcgcgcgaggcgcagagcgagggcgcgattgccgacgtgctc
atcgcccagctacagcggcactttggggccgtcgaagcgctaccgcagctcgaggcggat
cgcgcgtccgcggcaggccacgcgagccgagtgaagaccgaagtcgaggatctcgcctgc
gcctccgcggcgaagcagagagacgacgaccgcctgcgggaggccctcgccgcaggggac
gttttactgcgcttcttcgtgcggaatcccgcggccgccgccagcgcccccggggcggcg
gaggacgcgcgcccccgcgaagaggagaaatccgcggcggaaagagactccaagaagatg
caggacgcaggcgacgaccagcagattcccgtcgaaatcgacatggccagccgaaccgtg
cgctgcaaaaatcccgagatccagcagaaggtctacgccatggttagaagaatcgagagc
gctcttctgcctctcccgctgtcgtaa
DBGET
integrated database retrieval system
