Besnoitia besnoiti: BESB_073480
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Entry
BESB_073480 CDS
T10139
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
bbes Besnoitia besnoiti
Pathway
bbes03040
Spliceosome
Brite
Enzymes [BR:
bbes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BESB_073480
Spliceosome [BR:
bbes03041
]
Complex C
Other components
Step II factors
BESB_073480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
S1
AAA_19
nSTAND3
AAA_30
GIPC1_GH2
PhoH
T2SSE
SRP54
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
40312274
NCBI-ProteinID:
XP_029218205
UniProt:
A0A2A9ME19
LinkDB
All DBs
Position
Unknown
AA seq
1199 aa
AA seq
DB search
MDALERLSVISRITTELHNHWGVSDRDLAEFVVHLGEEASSLEEFREQLQENGAAVSSSL
AVSLYTTIQKLSQKKRATSKNSLIEPPVAARPVASSSSSSSSSSSSSSSDASLPNFSAVG
PDHVLTEKEQKFPGLCRPNDFSRPELQLERPDEHAPLSERAQRLLHAEKDERELLKEQKE
ALKRGKDSGFAPLTAGTGANSIPLGGAKASEAGERPKGKAPAHYYGKKGPMVRYAIYEGI
VEKVVEFGAFVRLEFEDGRRQGLLHVADMVKADGRSMQPQDIVSRNMAVKVKILGIAGTK
ISLSMREVDQETGEDLKPRGEFAKQEEEASEAKKVRVDEEAEERERQGIGRLTGIRIDSK
DNQAESLYCRKRKLMSDFDKWEAQQLLHSGLLSREEHPLFDDELGILPQTEVEEDVEIEI
REDEALFLRGQTTRTGMQLSPVKIVANPDGSLARAAATATALAKERREIRSAQEAAILDS
IPKDMSRPWEDPAPGPGERTIAQALKGLGQTSYEMPEWKKMYIGKSVSFGQKSNKSIAEQ
RQSLPIYRLKEPLIKAIKDNQVLIVIGETGSGKTTQMTQYVAEAGLISPGTMIGCTQPRR
VAAISVAKRVAEEFGCRVGQEVGYNIRFEDCTSADTIIKYMTDGMLLREALMDASLKRYS
MVMLDEAHERTISTDVLFGLLKDCCRRRRDFKLIVTSATLDAEKFSNYFFNSHIFTIPGR
TFPVEILYTKEPEADYVEASLITVLQIHLCEAPGDILLFLTGQEEIDTACQTLHERMQKL
ESTNPPPLIILPVYSALPSEMQTMIFDPAPAGCRKCVVATNIAEASLTIDGIYFVIDPGF
AKMKMYSPKTGMDSLVVAPISQANARQRAGRAGRTGPGKCYRLYTEQAYRCEMLPTAVPE
IQRTNLENTVLLLKAMGVNDMLNFDFMDPPPVQTLINALESLYELGALDDEGLLTRLGRK
MAEFPMEPQLSKMLLASVDLKCSDEIITIVSMLSVQNVFYRPKDKQAMSDQRKSCFHQPE
GDHVTYLEIYRGWQRNRFSNSWCFENFVQSRALRRAQDVRKQLITIMDRYKLDIISAGKD
YNRIRRCICAGYFRHACRRDPQEGYRTLVDHTQVFLHPSSALYNRHPEWLIYHELVLTTR
EYLRDCCTIEPQWLVEVAPKLFKLADQQRLSRRKMRERIEPLYDRFAEPNAWRLSKRKG
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgctggagcgtttgagcgtgatctcgcgcatcaccacggaactccacaatcac
tggggtgtcagcgaccgcgacctcgctgagttcgtggtgcatctcggcgaagaggcctcg
tcgcttgaggagttccgtgagcagctccaggagaacggcgcggccgtctcctcttcgctc
gccgtctcgctctacactaccattcaaaaactctcgcaaaagaaacgcgcgacctcaaaa
aacagcctcatcgagccccccgtcgccgcacgccccgtggcgtcctcttcctcttcttca
tcctcctcctcgtcttcttcttcctctgacgcttctttgccgaacttctctgcggtcggg
cctgaccacgtgctgacggagaaggagcagaagtttccaggcttgtgtcgcccgaacgac
ttctcgcgtcctgagctccagctcgagcgcccggatgagcatgcgccgctctctgaacgc
gcgcagcgccttctgcacgcggagaaggatgagagggaactgctgaaggagcagaaagag
gcgctgaagcgcggaaaggactcgggctttgcgcctctcaccgcaggaacgggcgccaac
agcattcccctcggtggcgcgaaggcctccgaggctggcgagcggcctaaaggcaaggcg
ccggcgcactactacggcaagaaaggaccgatggtacgctacgcgatctacgagggcatc
gtagagaaagtcgtcgaattcggcgccttcgtgcgtctcgaattcgaagacggccgccga
cagggccttcttcatgtcgccgacatggtaaaggcagatggaagatcgatgcagccacag
gatattgtcagccgcaatatggccgtcaaggtgaagattttgggaattgcgggtacaaag
atctcgctgtctatgcgcgaagtcgatcaagagacgggagaagacctcaaaccgcggggc
gaattcgccaagcaggaagaggaagcttcagaggcgaagaaggtccgcgttgacgaggag
gcggaggaacgtgagaggcagggcattggccgcctgacgggcattcgaatcgactcgaaa
gacaaccaagcggagtcgctgtactgccgcaagcgcaagctgatgagcgacttcgataag
tgggaggcgcagcagctgctccacagcgggctgttgtctcgcgaggagcatcctttgttc
gacgacgagctggggattctgccgcagaccgaagtcgaggaagacgtggaaattgagatt
cgcgaagacgaggcgctgttcctacgcgggcagactacccgaaccggtatgcaactgagc
ccagtgaagatcgtcgccaaccctgacggctcactcgcgcgcgcagcagccaccgcgact
gcgctggcgaaggagagaagagaaatccgcagcgcgcaggaggcggcaatcctcgactcc
atccccaaggacatgagcagaccgtgggaagaccctgcgccggggcctggagaacgaaca
atcgcgcaggcgctcaagggcctggggcaaacgagctacgagatgcccgagtggaagaaa
atgtacatcggcaagagtgtcagcttcggtcaaaagagcaacaaaagcatcgctgaacag
aggcagagtctgccgatctaccgcctcaaagagccgctcatcaaggcgatcaaagacaac
caagtcctcatcgtcattggagaaacaggaagcggcaaaacgacgcagatgacccagtac
gtggcggaggcgggattgataagcccggggacgatgattggatgcacgcagccgcggcgt
gtggcggcgatttcggtcgcgaagcgtgtcgcggaggagtttggctgtcgcgtggggcag
gaggtcggctacaacatccgcttcgaagactgcaccagcgcagacaccatcatcaaatac
atgacagacggcatgcttctgcgagaggcactgatggatgcttccctcaagagatactcc
atggtcatgctcgacgaggctcacgaacgcaccatcagcacagacgtcctcttcggtctc
ctcaaggattgctgtcggcgtcggcgggacttcaagctgattgttacgtccgcgacatta
gacgcggagaagttttcgaattactttttcaactcacacattttcacgattccagggcgc
acgttccccgtcgagatactgtacacgaaggagcccgaggcagactatgtggaggcgtcg
ctgatcacggtgctgcagattcacctctgtgaggcgccgggagacattttgctcttcttg
acagggcaggaggaaatcgatacagcgtgccagacgctgcacgagcgcatgcagaagctc
gaaagcaccaatccgccgccgcttatcattctgccggtctactccgcgctgccctctgag
atgcagacgatgatcttcgaccccgcccccgccggatgccgcaaatgcgtcgtcgcaacc
aacatcgcagaggcctcgctcaccatcgacggaatctactttgtcatcgacccgggtttc
gccaaaatgaaaatgtacagtcccaagaccggcatggacagcctcgtcgtcgcgccgatc
agccaggcgaacgcgcgacagagagcaggccgcgccgggcgcacaggacccgggaaatgc
tacaggctgtacaccgagcaggcgtatcgctgtgaaatgctgccgaccgcagtgcctgag
attcagcgcacgaacttggagaatactgtgctgcttctgaaggccatgggtgtgaacgac
atgctcaactttgacttcatggatccgccgcccgtccagacgctgatcaacgccctggag
agtctgtacgagttgggtgcgctggacgacgagggcctgttgacgcgcctcggtcggaag
atggcggagttcccgatggagccacagctaagcaaaatgcttctcgcgagcgtagacctc
aagtgcagcgacgaaatcatcacaatcgtttccatgctcagcgtgcaaaacgtcttctac
cgaccaaaggacaagcaagctatgtcagaccagcgcaagagctgcttccatcagcccgaa
ggcgatcacgtcacatacctcgaaatctacagaggctggcagcgcaaccgcttctcgaac
tcttggtgcttcgaaaacttcgtccagagtcgagcgctgcgacgcgcacaggacgtccgc
aaacaactcatcacaatcatggacagatacaaactcgacatcatctccgcaggcaaagac
tacaaccgaattcgccgctgcatctgcgcagggtacttcagacacgcctgccgccgcgac
ccgcaagagggatatcggacgttggtggaccacacgcaggtcttcctgcatccgtccagc
gcgctctacaaccgacaccctgagtggctcatctaccatgagctcgtgttgacaactagg
gagtacttgcgcgactgctgcacaattgagccgcagtggcttgtcgaagtcgcgcccaag
cttttcaaactcgccgaccagcagcgtctgtcgaggcgcaagatgcgcgagagaattgag
ccgctgtacgatcgcttcgccgagcctaacgcatggcgtctgtcgaagcgcaaaggctga
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integrated database retrieval system
