Besnoitia besnoiti: BESB_074240
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Entry
BESB_074240 CDS
T10139
Name
(RefSeq) putative ethylene-responsive RNA helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bbes Besnoitia besnoiti
Pathway
bbes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BESB_074240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbes03041
]
BESB_074240
03009 Ribosome biogenesis [BR:
bbes03009
]
BESB_074240
Enzymes [BR:
bbes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BESB_074240
Spliceosome [BR:
bbes03041
]
Complex A
U1 snRNP components
U1 related factors
BESB_074240
Complex B
BESB_074240
Ribosome biogenesis [BR:
bbes03009
]
Eukaryotic type
Pre-60S particles
Helicases
BESB_074240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Utp25_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
40312350
NCBI-ProteinID:
XP_029218281
UniProt:
A0A2A9MFW9
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MWGLVGKSALPSASRLPALGSSAFAPGKTEGWRSLAQRLGLKERTPICTANASVSAAPAS
RVSAPRSLSVRRHLPSANASFPSSLSPVRPRFFSNAKAELDYGYQSSTDYREETQTSAAS
GGAPPHRPDSTSSFSSVPPPPVYSGQALPPLSSSDSCPHPYSPSSYSADFGPVTSPREQA
FPPSYQSPYAYSQGFAPPYSSPSSSPNAFPPPPKQDGSYSVYGSENASGFGVPSYGAYGQ
PAVPYNGQANGAYAPAGSYAPTAAPRWAPGPSGGFQRGPAGYEGPQRGRSNDMSWRHSQW
GQDGGAGRRGRYETGNMGANLVEPRWNEEQLAPIRKEFYVEHPSVASRSDEEIAAFLDAN
AMRVDGQAPTPRPIFSFEETGFPAAIQSQLKKMNFTEPTAIQKIGWPTALSGRDMIGIAQ
TGSGKTLGFLLPGLVHASAQPPLAPGHGPIVLVLAPTRELAMQIRHECMRFTEGLSLSAS
SVEDGTAAPQDDRDRVRFRTACVYGGVPRQGQAAELRSGAEILIATPGRLIDFLDLGVTN
LKRVSYIVLDEADRMMDMGFEPQVRKIFSQVRPDRQTLLWSATWPKEVRGLASEFCRTKV
VKLQVGKADLQANANVTQRVEVVSSNQLQQRLLSVLQDEVAGHKTLIFCETKRQCDQLCR
ELRYRQLRALAIHGDKEQRERDRILHDFRRGDCEILLATDVASRGLDIQDIKFVINYDVP
KNIESYIHRIGRTGRAGNKGTAISFFQYDFYSPEKVTMARKISEVMRAVGQDPPEELQRI
GASRASSRSRM
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtggggacttgtgggcaagtcagcactgccttccgctagccgcctcccggcgctgggg
tctagtgcctttgcgccggggaaaactgagggctggcgaagccttgctcagaggctgggg
ctgaaggagaggaccccgatctgtacggctaatgcaagcgtctccgcagcgccagcctcg
cgtgtctccgcgcctcgctccttgtccgtgcgccgtcatctgccttctgccaatgcgtcg
tttccctcgtctctgtcccccgtcagaccgcgctttttttcgaatgccaaagcagaactg
gactacgggtatcagtctagcaccgactacagagaggaaacccagacgtcggctgcaagc
ggcggtgcgcccccacacagacctgattcaactagctctttctcctctgtccctcctcct
cctgtctactcagggcaagcccttcctcctctctcttcctctgactcctgtccgcacccc
tactcaccttcgtcatactctgcagacttcggccctgtgacgtctccgcgtgagcaggcg
ttccctccctcttaccagagtccttacgcgtattctcagggctttgcgccgccgtattcg
tctccctcgtcgtctcctaacgcattcccgcctccgccgaagcaagacggtagctacagc
gtgtatggcagtgagaatgccagcggtttcggggttccgtcatatggcgcttacggccaa
cccgctgtgccgtacaatggccaagcgaatggggcctacgcgcccgccgggtcttatgcc
ccaaccgcagcccccaggtgggctcctggccccagcggaggctttcaacgggggccggcg
ggctacgaaggccctcagagaggtcgcagcaacgatatgtcgtggagacacagccagtgg
ggtcaggacggtggagcgggtcgccgaggaaggtacgagacaggcaacatgggcgcaaac
ctcgttgagccaaggtggaacgaagagcagctggcgccgataagaaaagagttttacgtc
gagcacccgagtgttgcttcgcggtccgacgaagagattgccgccttcttggatgccaac
gcgatgcgggtcgacggacaggcgcccacgccgcggcccatcttctcattcgaggagacc
gggttccctgctgctattcagagccaattgaagaagatgaacttcaccgagccgactgcg
attcaaaagattggatggcctaccgcgctcagtggacgcgacatgattggcattgcgcag
acaggaagcggaaagacgctggggtttctccttcctgggctcgtccacgcctctgcccag
cccccgctcgcgccagggcacggcccgatcgttctggtgcttgcaccgacgagagaactc
gcgatgcagattcgccacgagtgcatgcgcttcaccgagggtctctcgctgtccgcgtct
tccgttgaagacggcacagcagcccctcaggacgacagagacagagtccggttccgcacg
gcgtgtgtctacggtggcgtgccgaggcagggacaggcggcggaactgcgcagcggcgca
gaaattctgattgcgacccccgggcgtctgattgattttctagaccttggggtcacgaat
ctgaagcgagtctcctacatcgtcctcgacgaagcagaccgaatgatggacatgggattc
gagccacaggtgcgaaaaatcttttcgcaagttcgccctgaccgccaaacactcctgtgg
tcggcgacctggccgaaggaggtccgcggcctggcgagcgagttttgccgaacaaaggta
gtcaagctccaagttggaaaggcggacttgcaagccaacgcgaacgtcacccagcgcgtg
gaagtggtctcgtccaaccaacttcagcagcgtcttttatcagttcttcaagatgaagtt
gctggccataaaactttgatcttctgcgagacgaagcgccagtgtgaccaattgtgccgg
gaactgcgctaccgccaactccgcgccctcgccattcacggagacaaggaacaacgtgaa
cgggacagaatcctccacgatttccgccgaggggactgcgaaatccttctcgcgacggat
gtcgccagccgagggctggacattcaggatattaagttcgtcatcaactacgacgttcct
aagaacattgagtcttacattcatcgcattggtcgcacgggacgtgcagggaacaaagga
acagcgatcagtttcttccagtacgacttctattctccggagaaggttacgatggctcgc
aaaatctccgaggtcatgagagctgtaggacaagatccgccggaagaattgcagaggatt
ggagcttcacgagcttcgtccagaagtaggatgtaa
DBGET
integrated database retrieval system
