| Entry |
|
|---|
| Name |
(RefSeq) DNA excision repair helicase
|
|---|
| KO |
|
|---|
| Organism |
bbes Besnoitia besnoiti
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:bbes00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BESB_077730
09124 Replication and repair
03420 Nucleotide excision repair
BESB_077730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:bbes03021]
BESB_077730
03036 Chromosome and associated proteins [BR:bbes03036]
BESB_077730
03400 DNA repair and recombination proteins [BR:bbes03400]
BESB_077730
Enzymes [BR:bbes01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BESB_077730
Transcription machinery [BR:bbes03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BESB_077730
Chromosome and associated proteins [BR:bbes03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BESB_077730
DNA repair and recombination proteins [BR:bbes03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BESB_077730
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
VII:1249324..1258960
|
|---|
| AA seq |
1053 aa
MVVFQVDEVTVYFPYDYIYPEQYAYVRALKQTLDAKGHAVLEMPTGTGKTVALLSLLTSY
QLAHPQLGKILYCTRTVPEMEKALMELKGVIDYRIEEIRKERERKVRKESSAASPPASPT
AAATEAVGPKPGNCASDPGTAGKGRAPAPSSPAVPGRRDPGEEAPKIGKDMTSGGYILGV
GLSARRNMCINPAVCQQPDREKIDESCRQLTAPWVRQRYLTSYNPPTARPLSAPRGSAEP
DGEAPAADIESLASCGGGESRRGGSREAERLEAIASNEEAEPGHYSPSLCPWYENLDRYF
TPQFFPAGVYTIEELKIAAGNWRHPILNRSLPFCPYFLARRLLHIANVVVLNYQYILDPK
VSQAALLSPLPDGISASHTTGAQSRSTYSNPYQPQGAGGLVNEEVQYEGSVVVFDEAHNI
DNVCIEALSVNINRSVMEAALRNLSQLAEKIEEVKKEDAERLREEYENLIRGLKRRREDE
EGASASASSSSSSSSSSSSSSAGEGTRSEAEELSRGGEDRAEGNEPASSGSGAEDKPGEV
TKGKKRPAEGQRSSGARFILENETLDLLASPLLPEDALMEQAVPGSIRKAEHFVSLMRRI
VSYLKSYIKIYELKSEGPLSFLHMFEKETHIDASLLKFFYDRLKSLFNTLQITEVESYAP
LTLVADFCTLVATYCEGFILICDPYPEAVGLYDPLLQLSCLDASLAMQPVLKRFQSLILT
SGTISPLELYPKLLNFVPVVTESFPMSLDRNCICPLIVARGSDQVPLTSKFEYRHDMNVL
RNYSNLLIDLCKHVPDGLVCFFTSYSYMESVLSNWYHSGVLAQVLDYKLIFIETKDVVAT
TLALHNFRRACECGRGAVFFSVARGKVAEGIDFDRHFGRCVVLFGVPFQYTLSRVLKARL
DFIREHYQIPDNEFLTFDAMRQAAQCVGRVIRSKNDYGLMIFADARYSRADKRSKLPPWI
LKHLDNAHLALNTETAISVARTFLRHMSQPPPPPSASRLDARQLQQPHQQQSRDVVRRPL
IVSGTGVTSQPKEEDTDISPEASGADEKKGPSG |
|---|
| NT seq |
3162 nt +upstreamnt +downstreamnt
atggtcgtcttccaggtcgacgaggtgacggtctactttccgtacgactacatctaccct
gaacagtatgcttacgtccgtgcactcaaacagacgctggacgccaagggccacgcggtt
ctcgagatgcccacgggcaccggcaaaaccgtcgctctgctctccctgctgacgtcctac
cagctcgcgcatccccaactcgggaagattctctactgcactcgaacggtgcccgagatg
gagaaggcgctgatggagctgaagggcgtgattgactaccgcatcgaagagatccggaag
gagcgagagcgcaaggtgcgcaaggagagttccgcggcgtcgccgccagcttcgccgacc
gccgctgcgacggaggcggtcggaccgaagcctggaaactgcgccagcgatcccggcaca
gcggggaaggggcgcgcgcccgcgcccagctcaccagccgtccctgggcggcgagacccc
ggggaagaggctcctaaaatcggcaaggatatgacaagcggcgggtacatcctcggcgtt
ggtctctctgcgcgacggaacatgtgcatcaatccggcagtgtgtcagcagccggaccga
gaaaagattgacgagtcatgtcgacaactgacagccccgtgggtgcgccagcgctacctc
accagctacaacccgcccacggcgcgcccgctttcggcccctcgcgggtcggcggagccc
gacggcgaggctccggccgcggacatcgagagcctcgccagctgcggcgggggcgaatct
cggcgcggcggcagtcgcgaagcagaaaggctcgaggcgattgcgtcaaacgaagaggcc
gagccggggcactactcgccctcgctctgtccgtggtacgagaacttggaccgatacttc
accccgcagttcttccccgctggcgtgtataccattgaggaactgaagattgccgcaggg
aactggcgtcaccccattctcaaccggagcctgcccttctgcccgtatttcctcgcacgt
cggctcctccacatcgccaacgttgtcgtcttgaactatcagtacattctcgaccccaag
gtctcgcaggccgcgctgctgtcgccgctgcctgacgggatctcggcctcgcacacgacg
ggcgctcagtcgcgctcgacgtattcgaatccgtatcagccgcaaggcgccggcgggctg
gtgaacgaggaagtccagtacgagggctctgtcgtggtgttcgacgaggcgcacaacatc
gacaatgtctgcatcgaggcgttgagtgtgaatatcaatcgctccgtgatggaggcggcg
ctgcggaacctgagtcagctggcggaaaaaatcgaagaagtgaaaaaggaggacgcggag
cgcctgcgcgaggaatacgagaacctgatacgcggcctcaagcgccgacgtgaagacgag
gaaggagcctctgcgtccgcctcttcatcatcgtcttcgtcgtcgtcttcttcctcgtcc
tcggctggcgaaggcacgcggagcgaggcggaggagctctcgcggggtggcgaagataga
gcagaaggaaacgaacctgcttcgtcgggctccggggcggaggacaagccaggggaagtg
actaagggcaagaagagacccgcagaaggccagagatcttcgggcgcaaggttcattctg
gagaacgagacactcgatcttctggcgagccctctgctccccgaagacgctctgatggag
caggccgttccgggcagcattcggaaagccgagcacttcgtctctctcatgcgtcgcatt
gtctcctacctaaagtcttacatcaagatctacgaactgaagagcgaggggcctctgtca
tttctccacatgtttgagaaggagacccatatcgacgcgagcttgctcaagttcttctac
gaccgcctgaagagcctcttcaacacgctgcagatcaccgaggtcgagtcgtacgcgcca
ctgacgctggtggcggacttctgtacactcgtggctacttactgcgaagggttcattctc
atctgcgacccgtatccggaagctgtcggcttgtacgaccctcttctccagctctcttgt
ctggatgcctcgctggcgatgcagccggtcctgaagcgcttccagtcactcatcttgaca
tccggaacgatttcgcctctcgagttgtacccgaaactcctcaatttcgtgccggtggtc
accgagtcctttccgatgtcgctggaccggaactgcatttgcccattgatcgtcgcccgc
ggatccgaccaggttcctctgacgtcaaagttcgaatatcgccatgacatgaatgtcttg
aggaactacagcaacctgctgattgacctgtgcaagcacgtgccagacggtctcgtctgt
ttctttacctcgtactcctatatggagtctgttctgtcaaactggtatcacagcggggtc
ctggcgcaagttctggactacaagctcatcttcatcgagaccaaggacgtcgtggcgaca
acgctggcgcttcacaacttccgacgggcgtgcgaatgtggtcgcggcgcggtcttcttc
tcggtcgcacggggcaaagttgctgagggcattgattttgaccgccatttcggaagatgt
gtggtgctcttcggcgtcccgttccagtacactctctcgagagtgctgaaagcccgactg
gatttcattcgggagcattatcaaattccagacaatgagtttctcactttcgacgccatg
cgccaggctgctcagtgcgttgggcgtgtcatccgaagcaaaaacgactatgggttgatg
atttttgccgacgcgcggtacagccgtgctgacaagcgaagtaaattgccaccatggatt
ctcaagcatttggacaacgctcacttggccctcaacacggaaactgcgataagtgtcgct
cgaacctttctgcgccacatgtcccagccgcctccgcctccttcggcttccagactggat
gctcgccagctgcaacaacctcaccaacagcaaagccgcgatgtagtgcggcgtccgctg
attgtaagcggcactggtgttacctctcagccgaaagaggaagacacagatatttcgcct
gaagcgagcggcgctgatgagaaaaagggcccttccgggtga |
|---|
