Besnoitia besnoiti: BESB_080820
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Entry
BESB_080820 CDS
T10139
Name
(RefSeq) putative mrna cleavage factor family protein
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
bbes Besnoitia besnoiti
Pathway
bbes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BESB_080820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbes03019
]
BESB_080820
Messenger RNA biogenesis [BR:
bbes03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
BESB_080820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
40313009
NCBI-ProteinID:
XP_029217875
UniProt:
A0A2A9MD41
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Position
VII:complement(<3381217..>3382940)
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AA seq
438 aa
AA seq
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MESSLHDTGSSPDLGTEDANGETLLVASAASSGSDDEHDVLADLSGAYLPPLHAASEPPD
GEDAGEAAASAGARRRPEGAPGPAAGASLVAATPEKPGAEAPSSTPTQARGGSLGPAAAA
ARRELRESEWAVFAASSYESQAEAQFEGKWEFLSSAKKSQAGAAGTAGTAGAAAASRLLA
KRLETYQRQGLRRSVAPVLLCHLREYLHVLLLFHREARRYTLLTFKAKSWERPEDVLERK
LEKILTKHRSEVHKSLANYTWVAPEQNEKVTADVREFLGEWWRPELDEEPLPFLPPHVTR
PKERIRLYQVQLPQKCSFRLPPALSLAAIPLFDLLRPEIHGLALAGIPHMLSRFRFRLLE
LSVTWMDSSTPSIGTGRRSKGTGGRRDQEEDEEEDFSPAFLEELTSQDAAMETVNEQGPT
EELPPELAALAAEEEEDA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggagagctctctgcacgacactggctcgtccccggacttggggactgaggacgcgaac
ggtgagacgctactcgttgcttccgcggcctccagcgggtccgacgatgagcatgacgtc
cttgccgatctctctggagcgtatttgcctccgctgcacgcggcctccgagccgcccgac
ggggaggacgccggggaagctgccgcttccgcgggcgctcgccgcaggccagagggagct
ccggggcctgctgccggggccagtctcgtcgcggcgacgccggagaagccgggcgcagag
gcaccttcgtcgactccgacgcaggcgcggggcggctcgctggggccagcggcggcggcg
gcgcggcgggaactccgcgagtcagagtgggcggtgttcgcggcctcgtcctacgagtcg
caggcggaggcgcagttcgagggcaagtgggagttcctctcctccgcgaagaagagccag
gcgggggcggcggggacagcggggacggcgggggcggcggcggcctcgcgtctgctcgcc
aagcgcctcgagacctaccagcgccagggtctgcggcgctccgtcgcgccggtgctgctt
tgtcacctgagggagtacctgcatgtgctgctgctctttcaccgcgaggcgcgacgctac
acgcttctcacctttaaggccaagagctgggagcgacccgaggacgtgctcgagcgaaaa
ctggagaaaatcctgaccaagcaccgctcggaagtccacaagagcctcgccaactacacc
tgggtcgcccctgaacaaaacgaaaaagtcaccgcagacgtgcgggagttcctcggagag
tggtggcgaccggaactagacgaagagccgctccccttcctcccgccccatgtcaccaga
cctaaagaacgaattcgactctaccaggtgcagctgccgcagaagtgctccttccggctg
ccgccggcgctctcgctggcggcgattccgctgttcgatctgctgcggcctgagatccac
ggcctggcgctcgctgggattcctcacatgctgtcgcggttccgctttcgcctgctggag
ctctccgtgacgtggatggacagctcgacgccctcgatcggcacgggtcgccgctcgaag
gggacaggggggcggcgagaccaggaggaggacgaggaggaagacttctcgcccgccttc
ctcgaagagctgacgtcgcaggacgcggcgatggagacggtcaacgagcaggggccgacg
gaggagctgccgccggagctcgctgcgctagctgcagaggaggaggaggacgcgtga
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