Besnoitia besnoiti: BESB_084240
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Entry
BESB_084240 CDS
T10139
Name
(RefSeq) DNA-directed RNA polymerase II RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
bbes Besnoitia besnoiti
Pathway
bbes03020
RNA polymerase
bbes03420
Nucleotide excision repair
Brite
Enzymes [BR:
bbes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BESB_084240
Transcription machinery [BR:
bbes03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
BESB_084240
DNA repair and recombination proteins [BR:
bbes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
BESB_084240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
40313350
NCBI-ProteinID:
XP_029217234
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Position
VIII:complement(2142952..2152613)
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AA seq
1255 aa
AA seq
DB search
MEDPWEADRPGGHGDVAYAAAGGESVGVASHYEPASRTAGASNAAFYYGGGEAADPQARQ
TDVFFPEDEDEGERGDEADQGPVDQDACWAVVSSFFHSHGLVNQQLESFNDFVSYKIQEI
IDEHPPIEIRPTPQYRPEEEVESNVIYRLKMDQLSLNRPSVEEKEGISKHLWPYEARTRN
LTYSSPLYVDVEQTTYTVDPDTGVERLVDQVTYSRVLLGRIPMMLKSAYCWTKDLPEHDL
ADVGECAYDQGGYFIINGGEKVLVAQERMASNFVYVFQKKQPSKFGWVAEVRSQKEGMQA
TSGFAVKKRSRTGGEGRGGKGGRPGGQIVAALPYIRTEIPIVILFRALGCISDRDILLRV
AYDLKDPQLIALMKPSLEEGFDYSTQDVCLDFIGKRGPTVGAQREKRIQYARELLRKEVL
PHVGTEAGCENKKAFFIGYMVHRLLLADLGRINQDDRDHFGKKRLDMAGPLIAASFGTLY
RKMIKDVRRILQRQVDHGKSFDVAGAIRSASQITQGLQYQIATGNWGKDKEGKIVRTGVA
QVLNRLTFASALSHLRRLNTPLGREGKMAKPRQLHNTHWGMICPAETPEGQAVGLVKNLA
LMSDISVGSATNTVHEFLVEWGLDPLEEMTPDVIKERVKVFVNGSWVGCFDEADVLCQTL
RQLRRRCDISSETSIVRDLVNREVKIFTDAGRAMRPLFVVDENTRDLVMRRCHLEELQRR
GKDEKSWGYLMEKGIIEFVDCEEEETCMIAMFVEDIRSEKRQAFPYTHCEIHPSLILGVC
ASIIPFPDHNQSPRNVYQSAMGKQAMGVYTSSFNHRMDTLAHLLYYPQKPLVCTRAMEFL
RFRELPAGINTIVAILCYSGYNQEDSLIMSQSSIDRGLFRSVFYRTYCSEERQQGSLMVE
SFEPPNIEYVQGMKRGDYSKLDADGLVEPGSRVLGDDVIIGKTSPIFDDDNGPGGAPGGA
VASPFAKRKRDCSLCLRSSETGVVDQVMLSVNSRGSRFTKVKVRSVRIPQTGDKFASRHG
QKGTIGISYRTEDMPFNEEGITPDLIMNPHAVPSRMTIGHLVECLLGKTAAIFGGEGDAT
PFNGYAVLDISNRLHSLGYERFGNERLYHGHTGRHLPSLVFFGPTYYQRLKHMVDDKIHA
RARGPVTMLTRQPMEGKSREGGLRFGEMERDCMISHGAAHMLKERLFEQSDAYRVHVCDI
CGLVCTADLSRGNFECKLCDNKSRISQICIPYACKLLLQELMTMCIYPRLVLQVA
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggaagatccgtgggaagcagacaggcccggcgggcacggagacgttgcctacgccgct
gcaggaggcgaaagtgtcggagtcgcctcgcactacgagcccgcctcaagaactgcaggc
gcttcgaacgcggctttttactacggcggcggagaggcggcagacccgcaggcgcgtcag
accgacgtcttcttccccgaggatgaagacgagggagagcgtggagatgaagcggatcaa
ggcccagtcgaccaggacgcttgctgggcggtcgtgagctctttttttcactcccacggc
ctcgtcaatcagcagctggagagtttcaacgacttcgtgtcctacaaaatccaagaaatc
atcgatgagcaccctcccattgaaatcagacccactccgcagtaccgccccgaggaggag
gtcgagagcaacgtcatttaccgactgaagatggaccagctttcgctgaatcggccgagt
gtcgaggagaaggaaggcatctcgaagcacctgtggccttacgaggcgcgcactcgaaac
ctcacttactccagccctctctacgtcgacgtggagcaaacgacgtacacagtggaccct
gacacaggcgtcgagcgcctcgtggatcaggtcacttacagtcgagtgctcttgggccgt
atccccatgatgttgaagtccgcgtactgctggacaaaggatcttcctgagcacgacttg
gcagacgtgggcgagtgcgcctacgaccagggcgggtacttcatcatcaacggaggcgaa
aaggtcctcgtggctcaagaacgcatggcatcgaacttcgtctacgtcttccagaagaag
cagccgtccaagttcggctgggtcgcggaagtccgcagtcagaaagagggcatgcaggcg
accagcgggttcgcggtcaagaagcggagccggactggcggcgaaggccgcggtggcaaa
ggggggcgacctgggggacagattgtggctgccctgccctatattcgaacagaaattccc
atcgtcattctctttagagcgctcggatgcatctcggaccgcgacattctgttgcgcgtg
gcgtacgacctgaaggacccgcagctgattgcgttgatgaagccttcgctggaggagggc
ttcgactacagcacgcaagacgtctgtctggacttcatcgggaagcgcggaccgactgtc
ggcgcccagcgcgagaagcgcattcagtacgcgcgcgagctgctccggaaggaagtcctg
ccgcacgtcggcacggaggcgggctgcgagaacaagaaagcgttcttcatcggctacatg
gtgcaccgcctgctgctcgccgacttgggtcgaatcaaccaagacgaccgcgaccacttt
ggcaagaaacgcctcgacatggctggccctctcatcgccgccagcttcggcacgctctac
cgcaaaatgatcaaagacgtcagacgcatcctgcagagacaggttgaccacggcaagtcg
ttcgacgtggcgggcgcgattcgcagtgcctcgcagatcacgcaggggctgcagtaccag
attgcgacgggcaactgggggaaggacaaggaagggaagatcgtgcgcacgggagtcgcg
caggtgctcaatcggctgaccttcgcctcggcgctctcgcatctgagacgcctcaacacg
ccgctcggccgcgaaggaaagatggcgaagccccgccaactccacaacacacactgggga
atgatctgccccgcagagaccccagaaggtcaggccgtcggcctcgtcaagaacctcgcg
ctcatgtctgacatcagcgtcggcagcgcgaccaacacagtccacgaattccttgtggag
tggggcctggatcccctggaggaaatgacgccggacgtgatcaaggagcgcgtgaaagtc
tttgttaatggaagctgggtcgggtgcttcgatgaagccgacgtgctctgccagacgctg
cgtcagctccggcgccgctgcgacatttcgagcgaaacctccatcgtccgcgacctcgtg
aacagagaagtgaagatcttcacagacgctggacgcgccatgcggccgctcttcgttgtc
gacgagaatacgcgcgatctcgtgatgaggcgttgtcacctggaggagctgcagcgacga
ggcaaggatgagaagagctggggctacctcatggagaagggtatcatcgagttcgtggac
tgcgaagaagaagagacgtgcatgattgcaatgtttgtcgaggacatccgcagcgagaag
aggcaggcctttccgtacacgcactgcgagatccatccgtccttgattctgggcgtctgc
gcgagcatcattcccttcccagatcacaatcagtcgccgcgtaacgtctaccagtcggct
atgggcaaacaggcgatgggtgtgtacacgtcgtccttcaatcatcgcatggacacgctg
gcgcatttgctctactacccgcagaagccgctagtgtgcacgagggcgatggagtttctg
cgcttccgcgagctgcctgccggcatcaacacaattgtcgccattctctgctactcgggc
tacaaccaagaagatagtctgatcatgtcccagtcgagcattgaccgcggcctgttcaga
tccgtcttctaccggacctactgcagcgaagagagacagcaaggaagcttgatggtggag
agcttcgagccgccaaacattgaatacgtccagggcatgaagcgaggcgactactccaag
ctcgacgcagacggcctcgtcgagcctggcagccgcgttcttggggacgatgtcattatc
gggaagacttcgccgatctttgacgacgacaacgggccagggggagctccggggggagca
gtagcctcgcctttcgcgaaacgcaagcgtgattgctccctctgtctacgttcgtctgaa
acgggcgtcgtcgaccaggtgatgctgtcggtcaacagccgcggcagtcgcttcaccaag
gtcaaagtgcgtagtgtgcgcatcccgcagacaggagacaaattcgcttcgcgacacgga
cagaagggaactatcggaatctcttaccgcaccgaagacatgcctttcaacgaggaaggt
atcacgccggacctcatcatgaacccgcatgcggtgccgtcgcgaatgacaatcgggcac
ttggtcgaatgtctgctggggaagaccgctgcgattttcggcggcgaaggcgacgccacg
ccgttcaacgggtacgcggtgctggacatctcgaaccgtctgcactcgctgggctacgag
cggttcgggaacgagcggctgtatcacggtcacacaggtcggcatctaccttcgctggtg
tttttcgggccgacttactaccagcgcctgaagcacatggtagacgacaagattcacgcg
cgtgcgcgcggccctgtgacgatgttgactcgccagcccatggagggtaagagtcgcgaa
ggcggcctgcgcttcggcgaaatggagcgcgactgcatgatcagccacggcgccgcgcac
atgctgaaggagcgcctcttcgagcaaagcgacgcgtaccgagtccacgtctgcgacatc
tgcggcttggtctgcaccgcagacctctccagaggcaacttcgagtgcaaactctgcgac
aacaaatcccgaatctcacaaatctgcatcccctatgcctgcaagctcctccttcaggag
ctcatgaccatgtgcatctatccgagactggtcctacaggttgcgtga
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